Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04325 ATGTTTCTGACTTTACCACTACCACTAATTTCCACCATCAACATGTCAGAGAAGAATCAAAAGAAGAACAAAACCCAAAAGAGTAACGTTAATGGGGTCAGCAAAAAGACACAAACTTTGGTGAAAACGGAAGACATAGAGGATGCAGTGTCCTTCTTCTCCAAAGACGAAACCCATAAACTGAGAGCGGTTTTATTGGATTGGTACGATCACAACCATCGGGTTCTTCCTTGGAGAACTGCTTCCAACCATAGCAATGTTAAAGAAGATGAAGAAGAAGTGGAAAAGAGAGCTTATGGTGTTTGGGTTTCTGAGATTATGCTGCAGCAAACAAGGGTTCAGACTGTTATTGCTTATTATAATCGCTGGATGCTTAAATGGCCCACCATTCATCATCTAGCTAAGGCTTCTCTTGAGGAAGTGAATGAGATTTGGGCTGGTTTGGGTTACTATCGGAGAGCTCGCTTTCTTTTAGAGAAAATAGTTGAAGAAGGAGGTGTTATTCCTAAAACAGCTTCGTTGTTACGAAAGATTCCTGGAATCGGAGACTATACATCTGGAGCAATTGCTTCTATAGCATTCAAAGAGGCGGTACCAGTGGTTGATGGAAATGTGATAAGGGTGATTGCCAGACTAAGGGCTGTTTCTGAAAATCCGAAAGACTCGGCAATCATTAAAAGATTTTGGGAAATAGCAGCTCAGTTGGTCGATCCTCTTCGTCCGGGAGACTTCAATCAGGCTCTCATGGAACTTGGTGCAACTGTATGCACCCCTTTGAACCCAAGCTGTTCGTTGTGTCCAGCATCAGAATTTTGTCATGCACTATCAATCGCTAAACGTGACAGTACAGCAGCGGTTACAGATTATCCGATTAAGGGCGTAAAGGTTAAACAACGAGCCGATTTTTCAGCTGTATGTGTTGTTGAATTACTTGGAGATGAAAAACAATCTAGCAGCAAATTTGTTCTCGTAAAAAGGCCCGACGAAGGATTGCTTGCCGGTCTATGGGAGTTTCCGTCTGTCCTAGTAGCCGGAGAAACTTCTCCATTAGCTAGAAGAAAAGCAACCGACTGCTTCTTGAAGAAAAATCTCAAAATTGACATAAAAAAGACTTGCGATATTATTTTGAGGGAAGATGTTGGAGAATTTGTTCACATTTTTAGTCACATTCGCCTCAAGTTGTATGTTGAATTACTTGTGGTACAATTAAAAGGGAAAGTAGATGATTTGTTGAAAAGCGAGGACGAAGAAACTATTACTTGGAAATGCGTTGACAGCAATGCCCTCTCGAGCATGGGACTGACAACCAGCGTAAGAAAGGTGTACAATATGGTTCAAAAATTTAAGCAGAAAAGGCTTCCTTCGAAGGACGCGTCGCCGCCAACCAAAAAGAGAAATAGAACAACCAAGAAAAACTAG 1419 0.4151 MFLTLPLPLISTINMSEKNQKKNKTQKSNVNGVSKKTQTLVKTEDIEDAVSFFSKDETHKLRAVLLDWYDHNHRVLPWRTASNHSNVKEDEEEVEKRAYGVWVSEIMLQQTRVQTVIAYYNRWMLKWPTIHHLAKASLEEVNEIWAGLGYYRRARFLLEKIVEEGGVIPKTASLLRKIPGIGDYTSGAIASIAFKEAVPVVDGNVIRVIARLRAVSENPKDSAIIKRFWEIAAQLVDPLRPGDFNQALMELGATVCTPLNPSCSLCPASEFCHALSIAKRDSTAAVTDYPIKGVKVKQRADFSAVCVVELLGDEKQSSSKFVLVKRPDEGLLAGLWEFPSVLVAGETSPLARRKATDCFLKKNLKIDIKKTCDIILREDVGEFVHIFSHIRLKLYVELLVVQLKGKVDDLLKSEDEETITWKCVDSNALSSMGLTTSVRKVYNMVQKFKQKRLPSKDASPPTKKRNRTTKKN 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04325 472 MobiDBLite consensus disorder prediction 451 472 - -
Vivi7g04325 472 SUPERFAMILY Nudix 290 445 IPR015797 -
Vivi7g04325 472 Gene3D - 60 274 IPR023170 -
Vivi7g04325 472 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 295 452 - -
Vivi7g04325 472 PANTHER ADENINE DNA GLYCOSYLASE 17 457 IPR044298 GO:0006284|GO:0016798
Vivi7g04325 472 SMART endo3end 107 254 IPR003265 GO:0006284
Vivi7g04325 472 Gene3D Hypothetical protein; domain 2 75 199 - -
Vivi7g04325 472 Pfam HhH-GPD superfamily base excision DNA repair protein 103 232 IPR003265 GO:0006284
Vivi7g04325 472 CDD ENDO3c 99 252 IPR003265 GO:0006284
Vivi7g04325 472 FunFam Adenine DNA glycosylase 75 199 - -
Vivi7g04325 472 Pfam NUDIX domain 319 442 IPR029119 -
Vivi7g04325 472 FunFam Adenine DNA glycosylase 295 451 - -
Vivi7g04325 472 SUPERFAMILY DNA-glycosylase 59 275 IPR011257 GO:0003824|GO:0006281
Vivi7g04325 472 FunFam Adenine DNA glycosylase 193 275 - -
Vivi7g04325 472 CDD DNA_Glycosylase_C 304 445 IPR029119 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04325 Vivi-Chr7 112899181 112902379 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04325 K03575 - gmx:100818278 692.189