Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04290 ATGGGGAAAGAAGTAGAAAAAATTGACTTTGAAAAAGTGATTGAAGAATTTGAGAGGATAACAAAAGATGCTGAGAATGTTCAAAAAGAAACATTGAGAAAGATTTTGGAAGAAAATGCATCAACCGAATATTTGCAAAGTTTAGGACTTAATGGAAGAACCGATCCTGAAAGTTTCAAGGCTTGTGTTCCATTGGTCACATACAAAGATTTAGAGCTTCATATCCAAAGAATAGTTGATGGAGATGTTTCTCCTATTCTCACTAGAAAACCAATCAGAGTTATATCCTTAAGTTCTGGCACTAGTCAAGGAAATCGAAAATGTATTCCATGGAATGATGAATTGTTTAAAACCACAGTACAGATATATCAAACCTCTTTTGCTTTTAGGAACAGAGATTTTCCAATCCAAGATGGAAAGGATTTAAGCTTTATCTATGGCAACAATGCACCACCAAAAAAAGGGGGCGTGATACTAGGAACAGCCACATCGAATGTACTCGGAAATCCAGGATACAAGAATGCAATGCAAGCACTTAAATCTCCAAGTTGCAGTCCAGATGATGTAATTTTCAGTCCTGATTTTCAGCAATCACTTTACTGCCACATCTTATGTGGACTACTTTTTAGAGAAGAGGTTCAATCAATTTCATCAACATTTGCACACAGTATTATCTATGCTTTCAGAACATTTGAAAAAGATTGGGAAGAACTTGTTAATGATATAAAAAAAGGCGTTCTTAGCAGCAGAATCACCGTTCCTTCCATTAGAATTGCTATGTCCAAATTGTTGAAACCGAATCCTGAACTAGCTAACTTGATCCACAAGAAATGCAAAGGATTAAGAAACTGGTATGGGTTGATACCAGAGCTTTTTCCTAATGTTAAGTACATTCAAGCAATTATGACAGGTGCAATGGAACCCTATTTGAAAAAATTGAGACACTATGCTGGAGAAGTTCCTTTATTAACTTCTGAGTATGGTTCTTCTGAAGGCTGGATCGGTTCGAACGTGAATCCGAAAGTAGCTCCAGAATTTGCTACTTATGTTGTTCTTCCACAAGTTGCATACTTTGAATTTATTCCATTGATACAACTTGATGGAACTAGGTTAGAACTCGAGCCAGTTGGTTTAACTGATGTCAAGATTGGTGAGGAGTATGAGATTGTTTTAACCAATCCTGCAGGTTTATACAGGTATAGGTTAGGAGATGTAGTAAAGGTTATGGGGTTCCATAACTCAACTCCAGAAATCAAGTATATGCGTAGGAGCGGTCTTTTGCTTACAATAACCACTGATAAGCATAGTGAGATTGATTTGCAATTATCAGTAGAAAATGCATCCAAGTTTTTAGCTGAGGAGAAAATAGAGGTGATTGACTATACTAGCTACATTGATTTATCCACAGAGCCAGGACACTATGTTATCTTCTGGGAAATTAGTGGTGAAACAAGTGATGAAGTGTTGTGTGAGTGTTGCAATTGTTTGGACAAGTCTTTTATTGATCCAGCTTATATTTTCTATAGAAATTGCAAAGGTATTGAGGCTCTTGAACTCCGAGTTGTTGGGAAAGGGACATTCCAAAAGATTCTTGAGAGCCAAGTTGAAAGAGGTGTACCTGTGAGTCAGTTCAAGACACCTAGGTGTGTTGGTTCTACAAACACCACAATGTTGCAAATTTTGTTGAAAAATGTTGTCAAGAGATATGTTAGTACTGCTTTTAATTGA 1728 0.3669 MGKEVEKIDFEKVIEEFERITKDAENVQKETLRKILEENASTEYLQSLGLNGRTDPESFKACVPLVTYKDLELHIQRIVDGDVSPILTRKPIRVISLSSGTSQGNRKCIPWNDELFKTTVQIYQTSFAFRNRDFPIQDGKDLSFIYGNNAPPKKGGVILGTATSNVLGNPGYKNAMQALKSPSCSPDDVIFSPDFQQSLYCHILCGLLFREEVQSISSTFAHSIIYAFRTFEKDWEELVNDIKKGVLSSRITVPSIRIAMSKLLKPNPELANLIHKKCKGLRNWYGLIPELFPNVKYIQAIMTGAMEPYLKKLRHYAGEVPLLTSEYGSSEGWIGSNVNPKVAPEFATYVVLPQVAYFEFIPLIQLDGTRLELEPVGLTDVKIGEEYEIVLTNPAGLYRYRLGDVVKVMGFHNSTPEIKYMRRSGLLLTITTDKHSEIDLQLSVENASKFLAEEKIEVIDYTSYIDLSTEPGHYVIFWEISGETSDEVLCECCNCLDKSFIDPAYIFYRNCKGIEALELRVVGKGTFQKILESQVERGVPVSQFKTPRCVGSTNTTMLQILLKNVVKRYVSTAFN 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04290 575 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 7 574 IPR004993 -
Vivi7g04290 575 Coils Coil 10 30 - -
Vivi7g04290 575 Pfam GH3 auxin-responsive promoter 16 552 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04290 Vivi-Chr7 111929108 111931121 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04290 17 572 EF-hand Containing Proteins AT1G23160 37.828 3.26e-126 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04290 K14506 - gmx:100806209 842.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g04290 7 111929108 111931121 Vivi7g04290 7 111929108 111931121 ECH