Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04256 ATGGCACCGAGATACAGTCGCGGAAAGGCCAAGGGAGAGAAGAAGAAGAAGGAAGAAAAGATTCTTCCGGTTGTCATGGATATCTCAGTGAACCTTCCAGATGAAACTAGTGTTATTCTGAAGCAGGGTATATCTACTGATAGAATAATAGATGTTCGTCGGCTTTTATCAGTGAATACAGAGACGTGTTACATTACCAACTTTTCACTATCACATGAGATAAGAGGGACACGTTTGAAGGATACGGTGGACGTGTCCGCACTGAAGCCTTGCCTCCTCACTTTAGTTGAAGAGGATTATGATGAGGAAGGCGCGGTGGCTCACGTGCGAAGACTACTGGACATCGTGGCCTGCACCACCAGCTTCGGTCCGTCGTCTCCGCCGAAGAATGGTGCGAAGTCGAGCAAACCTCAATCGCCGCCTCCGGCGAAGCAATCACCAAAAGACGCTGCGGCGGCGGACGGAGATGGAGAGATAAGCCACTCGTGCCCTAAGCTGGATACTTTTTACGAGTTTTTCTCTCTCTCAAACCTCACTGCGCCTCTTCAATATGTGAAGAAAGCTTCGAGGCGATACGTGGAGGAAATATCGGAGGAGGATCATCTCTTCTCGCTCGATGTGAAGGTATGCAACGGGAAAGTGGTGCATGTTGAGGCTTGCAGAAAGGGGTTTTACAGTGTTGGGAAGCAGAGGATTCTGTGTCATAATCTCGTTGATTTGTTGAGACAGATTAGCAGAGCTTTTGACAATGCTTATGATGATCTCTTGAAGGCATTTTCAGAACGTAACAAGTTTGGAAATCTTCCCTATGGCTTCAGATCCAACACGTGGCTTGTTCCTCCTATTGCAGCGCAATCACCATCATCTTTCCCTCCTCTTCCCGTGGAGGATGAAAATTGGGGAGGAAATGGTGGTGGTCTTGGGAGAGATGGAGAGTATGATTTGATTCCTTGGGCCAATAAGTTTTCTTTTATTGCGTCTATGCCCTGCAAGACCGCCGAAGAAAGACAAGTTCGTGATAGAAAAGCATTTCTTCTGCACAGCCTGTTTGTTGATGTTGCCATTTTCAGAGCAATTAAGGCTGTTAAACATGTTTTGGAAGATCCCAGTTTTAGCTACTCAGCAGCAGAAAATGATATTTACAGTGAGATAGTAGGTGATTTGAGCATTAGAGTCTTGAAAGATGGTTCTGTTGCAAGCTGTAAGATTGATTCCAAAATTGATGGAGTTGAAGCTACAGGAGTAAATCAAAAGGATCTAGTCGAACGAAATTTATTGAAAGGGATCACTGCAGATGAAAATACTGCCGCCCATGATATTACCACTCTAGGTGTTGTTTACGTAAGATATTGTGGTTATGTGGTTGTTGTGAAAGTTGAAGGTGAAGCTAATGAAAAAGACAATTCTTCATCTCATCAGAATAATGAATTGTTTGATCAGCCAGAGGGTGGTGCCAATGCACTAAATATTAACAGCTTAAGATTTCTTCTTCACAGCACAACCCTACCTGAGAACAATAAACAGATGACTGAGATACAGTTTGATAGTAAAGAGCTTAGTGGTACTGACGCTTTTGTAGAAAACCTGATTAAAAAAAGCCTTGCTAAGCTTGAAGAAGAGGAACTGAGTTCGGACTATTTTGTAAGATGGGAACTAGGTGCGTGCTGGGTACAACATTTGCAAGACCAAAACAGTACAGACAAAGATAAGAAGCCATCTTTGGAGAAGGCTAACAATGAAATGAAGGTTGAGGGTCTTGGGAAACCCCTGAAAGCCCTCAAGAATAATAAAAAGAAATCTGATTCAAGCAATCCAAATTTTGCAACTGAACATTCAAAATCTAATCTCGAGGCTGAAAATGCTGCGTTGTCCTCAAGTGAATCCCAGCATGAAACTGCAGCAGCTGAGAATGAGCTTGTGCTGAAACGGATGTTATCTGAGGCAGCTTTTACCAGATTGAAAGAATCAGGAACTGGACTTCACTGCAAGTCTATGCAAGATTTAGTCGACTTATCTCAGAAATATTACATGGATGTTGCCATCCCAAAACTGGTAGCAGATTTTGGCTCCTTGGAACTTTCTCCAGTTGATGGTCGAACGCTAACTGATTTTATGCATACCAGGGGTCTGCGAATGCGATCTCTTGGACATGTTGTCAAGCTTTCAGAAAAACTTTCACATGTGCAATCACTTTGCATTCATGAGATGATAGTTCGAGCTTTCAAGCACATCCTGAGGGCAGTTATTTCTGCTGTTGTTGACAAGGAGAAAACGGCTTCATCAATAGCTGGTGCATTGAATTTGCTGCTTGGTGTTCCTGAAAATAGAGAAACAGATGAATCATGTGATGTCCACCCTCTTGTGTGGAAATGGCTAGAGAGATTTTTGAAGAAACGATTTGACTGGGATCTTAACAGATTGAACTATAAAGATGTGAGGAAATTTGCAATTCTCCGCGGCTTGTGTCACAAGGTGGGAATTGAGCTCGTTCCAAGGGATTTCGACATGGATTCTCCATTTCCCTTTCAAAAGTCTGATATTGTCAGCTTGGTTGCAGTTCACAAGCAAGCAGCATGCTCATCTGCAGATGGAAGGCAGCTCCTGGAGTCCTCCAAAACAGCTTTAGACAAGGGAAAGCTTGAAGATGCTGTTACCTATGGGACAAAGGCTCTTGCGAAGCTTGTAGCAGTTTGTGGTCCCTACCATAGGATGACAGCTGGAGCATACAGCCTCCTTGCTGTAGTTTTATATCATACTGGAGACTTCAATCAGGCTACGATCTATCAACAAAAAGCTTTGGATATCAATGAGAGAGAGTTAGGTCTGGATCATCCTGATACCATGAAGAGCTATGGGGATCTTGCTGTATTCTATTACAGACTTCAGCATACAGAGCTGGCTCTCAAATATGTGAAGCGTGCTTTATACCTTTTGCATCTGACATGTGGCCCATCCCATCCAAATACTGCCGCAACCTACATTAATGTGGCTATGATGGAGGAAGGTCTAGGAAATGTACATGTTGCTCTAAGATATCTTCACAAAGCATTAAAGTGCAACCAGAAATTACTTGGTGCAGATCATATTCAGACTGCTGCAAGTTATCATGCAATAGCAATAGCACTCTCGTTGATGGAAGCATATCCGTTGAGTGTGCAGCATGAGCAAACAACTTTGCAAATTTTGCGGGCAAAGCTTGGCCCTGATGACTTGCGAACACAGGACGCTGCAGCTTGGCTTGAGTATTTTGAATCCAAGGCTTTTGAACAGCAAGAGGCTGCTCGAAATGGTACAAGAAAACCTGATGCATCAATAGCTAGCAAAGGACATCTAAGTGTGTCGGATCTTCTTGACTACATCAATCCTAATCACGATACCAAAGGGAGAGACGCAGCAGCAAAGAGAAGAAACCAGGTAAGAGCGATTTCCTACCAAAACAATGTCTCAGCAAGTTCTGATGAGTCTTCAAAAGAAATTCAAAAGGAGGCTTCAGATGAAGAGTTACATATACCTGAACCAGAAGGTAGTGCAGATTCTGAGAATGAGACCAACTCAGCACCTGAACCAGAACTGCCCATTTTAGAAAAGATTCCAGATGAAAAGCCACACACTTCTAATGAATTATTGTCTGAAGCACTTCCTGACGGAGATGATGGATGGCAATCAGTTCAAAGACCAAGATCAGCAGGCTCATATGGCCGGCGACTGAAACAAAGACGGGGAACACTTGGCAAAGTTCATAGTTACCAGAAAAATGTGGAAGTTGGCACTGAAAATCCTTCGGTAAAGAATGCTAATCAGAATAGTAAGTACTATTTCTTGAAGAAACGGACAGCACACCATGGGGGTTATGCAGATAACCGTGCTGTAAACATCAGCCAAGGCACAAAGTTTGGAAGGAAAACAGGCAAGACTGTTGTTGCATACAGGGTCAAGTCTACACCCTCTGCTTCTATAACTGTTGCAAATGAAACTTTAGAAACTTGTGACAAGGAACCTGATTCAATTGATGTTAATCCAGTTAAGACTTCTATAGTCAGTCTTGGAAAAAGTCCTTCATACAAGGAAGTAGCCTTGGCTCCTCCTGGGACAATCTCCAAGTTGCAGGTCTATAATCCTCAAAGTGAGACTTCTGTTGGTCGCGAACATGATGTAGGAAAGTCCGAAGAGGAAAATGTTGAAGCTCATAGAAACATCAATCCAACCCCAAAAGAAGCAAAGAATGTGTTAAAAGAGAAGTCTGATGATTCTTTATCTGATTCTATAGAAGATTCACAAGACGATACTGTAGTGTCTACTGAGAAGAAAGAAGAAACTCAGTTGAATAAAGTTGTTCAAGATAATGTGGCAGCAGAGGGGCTTGAATCTGGGGACCTTGAAGCACAAGGAGCTGTTGATAACAGCGTAGTGATTGACGCATTGGAGGATGCTGTGGACTCTTACAAACAAGAACTTGTTGCAATTAATCCGCCTTGCAGTTTTGAACCTTCTGATAATACAAGTTCTAGCCCACATGGTGGTGAGGAATTAGGGGTGACTTTATTATCACCTAGTCAGAGTCAAGCTGGGGGAATACCGTATAAGAAGTTGTCTGCATCAGCAGCTCCATTCAACCCATCACCTGCCATTGCACGTGTTGCACCTATTGCCATTAATATGACGCATCCTTCTGGTCCTGGTGCTGTTCCAGCTATTGGTCCCTGGCCAGTAAACATGAACGTTCATCCCGGACCTGTTAGTCCAATGTGTTCCTCTCCTCACCATGCATATCCATCCCCTCCAACAACCCCAAACATGATACAACCATTGCCATTCATGTATCCTCCTTATTCTCAACCTCAGTCAGTACAAACCAGCAGTGCCTTTCATGCCAATCATTTTACATGGCAGTGTAATTTGAACCCCGTCATATCTAAGTTTGGTCCTGGTGCTGTTTGGACCGGCTGTCATCCTGTGGAATTTCCTCGTCCAGTACCTATTGTTGAATCAGTCCCTGATATCATTTCCGAGGCACAGGTGCAGTTTCATACAGCTGAAAGTCCAATTTCAGCTCCAGTTCTGCTTGAGGATGTTGATAAGGTTGGGGATTCTAATAACGAGGTAAAATCTCCAGGATTGGAGTTGACTGAAGATGAATTGGTGAGAGTTGGTTCAGAGAGTATAAAAGAAAATGGTAATCCAAATTTTCCTGGAACAGACAATGCTGTGAACGAGCCAAACCAAAATGTTGACTCTAACAGCAACACTAATTGTAGTGAAATGAACATGGAGGATGAGAAAACATTCAGCATTTTGATTCGAGGAAGAAGAAACCGAAAGCAAACTCTGAGAATGCCAATAAGTTTACTTACTCGACCCCATGGCTCTCAGTCATTTAAGGTTATCTATAACCGTGTCGTTAGAGGAAGCGATTCTCCGAGGTCCATAAATTTCTCTTCTAGTAAACATTGTACAGCCACTGCTTAA 5466 0.4305 MAPRYSRGKAKGEKKKKEEKILPVVMDISVNLPDETSVILKQGISTDRIIDVRRLLSVNTETCYITNFSLSHEIRGTRLKDTVDVSALKPCLLTLVEEDYDEEGAVAHVRRLLDIVACTTSFGPSSPPKNGAKSSKPQSPPPAKQSPKDAAAADGDGEISHSCPKLDTFYEFFSLSNLTAPLQYVKKASRRYVEEISEEDHLFSLDVKVCNGKVVHVEACRKGFYSVGKQRILCHNLVDLLRQISRAFDNAYDDLLKAFSERNKFGNLPYGFRSNTWLVPPIAAQSPSSFPPLPVEDENWGGNGGGLGRDGEYDLIPWANKFSFIASMPCKTAEERQVRDRKAFLLHSLFVDVAIFRAIKAVKHVLEDPSFSYSAAENDIYSEIVGDLSIRVLKDGSVASCKIDSKIDGVEATGVNQKDLVERNLLKGITADENTAAHDITTLGVVYVRYCGYVVVVKVEGEANEKDNSSSHQNNELFDQPEGGANALNINSLRFLLHSTTLPENNKQMTEIQFDSKELSGTDAFVENLIKKSLAKLEEEELSSDYFVRWELGACWVQHLQDQNSTDKDKKPSLEKANNEMKVEGLGKPLKALKNNKKKSDSSNPNFATEHSKSNLEAENAALSSSESQHETAAAENELVLKRMLSEAAFTRLKESGTGLHCKSMQDLVDLSQKYYMDVAIPKLVADFGSLELSPVDGRTLTDFMHTRGLRMRSLGHVVKLSEKLSHVQSLCIHEMIVRAFKHILRAVISAVVDKEKTASSIAGALNLLLGVPENRETDESCDVHPLVWKWLERFLKKRFDWDLNRLNYKDVRKFAILRGLCHKVGIELVPRDFDMDSPFPFQKSDIVSLVAVHKQAACSSADGRQLLESSKTALDKGKLEDAVTYGTKALAKLVAVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVKRALYLLHLTCGPSHPNTAATYINVAMMEEGLGNVHVALRYLHKALKCNQKLLGADHIQTAASYHAIAIALSLMEAYPLSVQHEQTTLQILRAKLGPDDLRTQDAAAWLEYFESKAFEQQEAARNGTRKPDASIASKGHLSVSDLLDYINPNHDTKGRDAAAKRRNQVRAISYQNNVSASSDESSKEIQKEASDEELHIPEPEGSADSENETNSAPEPELPILEKIPDEKPHTSNELLSEALPDGDDGWQSVQRPRSAGSYGRRLKQRRGTLGKVHSYQKNVEVGTENPSVKNANQNSKYYFLKKRTAHHGGYADNRAVNISQGTKFGRKTGKTVVAYRVKSTPSASITVANETLETCDKEPDSIDVNPVKTSIVSLGKSPSYKEVALAPPGTISKLQVYNPQSETSVGREHDVGKSEEENVEAHRNINPTPKEAKNVLKEKSDDSLSDSIEDSQDDTVVSTEKKEETQLNKVVQDNVAAEGLESGDLEAQGAVDNSVVIDALEDAVDSYKQELVAINPPCSFEPSDNTSSSPHGGEELGVTLLSPSQSQAGGIPYKKLSASAAPFNPSPAIARVAPIAINMTHPSGPGAVPAIGPWPVNMNVHPGPVSPMCSSPHHAYPSPPTTPNMIQPLPFMYPPYSQPQSVQTSSAFHANHFTWQCNLNPVISKFGPGAVWTGCHPVEFPRPVPIVESVPDIISEAQVQFHTAESPISAPVLLEDVDKVGDSNNEVKSPGLELTEDELVRVGSESIKENGNPNFPGTDNAVNEPNQNVDSNSNTNCSEMNMEDEKTFSILIRGRRNRKQTLRMPISLLTRPHGSQSFKVIYNRVVRGSDSPRSINFSSSKHCTATA 1821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04256 1821 Gene3D Tetratricopeptide repeat domain 865 978 IPR011990 GO:0005515
Vivi7g04256 1821 MobiDBLite consensus disorder prediction 1155 1176 - -
Vivi7g04256 1821 MobiDBLite consensus disorder prediction 123 158 - -
Vivi7g04256 1821 SUPERFAMILY TPR-like 872 977 IPR011990 GO:0005515
Vivi7g04256 1821 MobiDBLite consensus disorder prediction 563 582 - -
Vivi7g04256 1821 Pfam Translation initiation factor eIF3 subunit 135 693 835 IPR033646 -
Vivi7g04256 1821 ProSiteProfiles Clueless (Clu) domain profile. 296 571 IPR025697 -
Vivi7g04256 1821 SUPERFAMILY Hypothetical protein c14orf129, hspc210 178 264 IPR023231 -
Vivi7g04256 1821 MobiDBLite consensus disorder prediction 1380 1420 - -
Vivi7g04256 1821 MobiDBLite consensus disorder prediction 1721 1753 - -
Vivi7g04256 1821 MobiDBLite consensus disorder prediction 1374 1440 - -
Vivi7g04256 1821 MobiDBLite consensus disorder prediction 1207 1241 - -
Vivi7g04256 1821 Pfam Mitochondrial function, CLU-N-term 46 116 IPR028275 -
Vivi7g04256 1821 ProSiteProfiles TPR repeat profile. 906 939 IPR019734 GO:0005515
Vivi7g04256 1821 CDD CLU-central 695 836 IPR033646 -
Vivi7g04256 1821 Pfam Tetratricopeptide repeat 905 975 - -
Vivi7g04256 1821 Pfam Tetratricopeptide repeat 989 1063 - -
Vivi7g04256 1821 MobiDBLite consensus disorder prediction 1493 1512 - -
Vivi7g04256 1821 MobiDBLite consensus disorder prediction 1143 1189 - -
Vivi7g04256 1821 Gene3D Tetratricopeptide repeat domain 979 1108 IPR011990 GO:0005515
Vivi7g04256 1821 SMART tpr_5 990 1023 IPR019734 GO:0005515
Vivi7g04256 1821 SMART tpr_5 948 981 IPR019734 GO:0005515
Vivi7g04256 1821 SMART tpr_5 906 939 IPR019734 GO:0005515
Vivi7g04256 1821 MobiDBLite consensus disorder prediction 1720 1753 - -
Vivi7g04256 1821 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 11 1439 IPR027523 GO:0006996
Vivi7g04256 1821 FunFam Tetratricopeptide repeat (TPR)-like superfamily protein 861 1111 - -
Vivi7g04256 1821 MobiDBLite consensus disorder prediction 1492 1512 - -
Vivi7g04256 1821 MobiDBLite consensus disorder prediction 599 633 - -
Vivi7g04256 1821 MobiDBLite consensus disorder prediction 562 635 - -
Vivi7g04256 1821 SUPERFAMILY TPR-like 943 1070 IPR011990 GO:0005515
Vivi7g04256 1821 MobiDBLite consensus disorder prediction 123 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04256 Vivi-Chr7 111032037 111046195 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04256 K03255 - gmx:100784117 2744.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g04256 7 111032037 111046195 Vivi7g04256 7 111032037 111046195 ECH