Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04195 ATGCAGCAGACACCTCAAATGATTCCTATGATGCCGTCTTTCCCGCAAACAAACATAACCACTGAGCAGATTCAAAAATATCTTGACGAAAACAAGAAATTGATTCTGGCAATACTAGACAATCAAAATCTTGGGAAACTTGCAGAATGTGCCCAGTATCAAGCTCAACTCCAGAAGAATTTGATGTATTTAGCTGCGATTGCTGATGCGCAGCCACAAACACCAACCTTGCCTCCGCAGATGGCCCCGCACCCTGCGATGCAACAAGGGTTCTTCATGCAGCACCCTCAAGCTGCAGCAATGGCTCAGCAACAAGGAATGTTCCCGCAAAAGATGCCAATGCAATTCGGTGGTAATCCACATCAAATGCAGGAGCAACAACAGCAACAGCAGCAGCAACTTCATCAGCAGGCTATGCAAGGTCAAATGGGACATAGACCCGGAGGGATAAACAACGGCATGCATCCAATGCACAATGTGCACAACAATGAGGCTGCTCTCGGAGGCAGTGGTGGTGGTCAGAATGATGGACGTGGTGGTGGAAGCAAGCAAGATGCTTCCGAAACCGGCACAGCCGGTGGAGATGGTCAAGGAAGCTCTGCCGCCGCTGCAGCCACGCATAACAGCGGAGACGCATCGGAAGAGGCAAAGTGA 654 0.5 MQQTPQMIPMMPSFPQTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIADAQPQTPTLPPQMAPHPAMQQGFFMQHPQAAAMAQQQGMFPQKMPMQFGGNPHQMQEQQQQQQQQLHQQAMQGQMGHRPGGINNGMHPMHNVHNNEAALGGSGGGQNDGRGGGSKQDASETGTAGGDGQGSSAAAAATHNSGDASEEAK 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04195 217 Pfam SSXT protein (N-terminal region) 18 74 IPR007726 -
Vivi7g04195 217 MobiDBLite consensus disorder prediction 112 217 - -
Vivi7g04195 217 MobiDBLite consensus disorder prediction 180 207 - -
Vivi7g04195 217 PANTHER SYNOVIAL SARCOMA ASSOCIATED SS18 PROTEIN 2 210 IPR044779 GO:0003713
Vivi7g04195 217 MobiDBLite consensus disorder prediction 117 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04195 Vivi-Chr7 109629625 109633756 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04195 - - gmx:100804074 268.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g04195 7 109629625 109633756 Vivi7g04195 7 109629625 109633756 ECH