Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04182 ATGCTTCATTGCCAGTATACAAAAATGGCAACAGTGACGGCTTCAAGTAACATAGTATCCAGAACCTCTCATGTCAATATACCAACTGTCTCATGTGAGTCTAAAATGGGACCAATGAGACTTGGTTCCATAAGGAAAGCCAATACTCATAATGGGCTCAGAGTTTTGAACTCGTTGGACGAGATACTAAATAGGACGCCGATTAAAACGAAGGGAGTGCAATCGAGGAAGAAGGGTGTTCAGAGGAAGAGTGTTAGGCCTAAAGGTATTATAGTTTGTGGCATGAATTTGATCTTTGTTGGAACTGAGGTTGCTCCGTGGAGCAAAACTGGCGGTTTAGGTGATGTTCTTGGAGGTCTTCCACCGGCATTAGCAGCTAACGGACACAGAGTTATGACCGTCACTCCGCGTTATGACCAATACAAAGACGCGTGGGATACAAGTGTAACGATCGAGGTAAAAGTAGGAGATAGAACAGAAAAAGTTCGCTTCTTCCATTGCTTTAAACGAGGAGTTGATCGCGTCTTTGTAGATCACCCTATATTTCTTGAAAAGGTGTGGGGGAAAACTGGAACAAAACTTTATGGTCCTGCTGCAGGAGACGATTACCAAGACAATCAACTACGTTTTAGCATCTTCTGTCAGGCAGCTCTGGAAGCGGCGAGAGTTCTGAATCTTAAGAGCAATAAATATTTCTCGGGACCATATGGTGAAGATGTCATTTTCGTCGCTAATGATTGGCACACTGCCCTTATCTCATGCTACATGAAATCCATGTACCAATCGATTGGCATCTTTAGGAATGCCAAAGTTGTTTTTTGTATACACAACATTGCTTACCAAGGAAGATTTGCATTCACCGACTATTCGCTTCTCAATCTCCCTGACCAATTTAAAAGCTCCTTTGACTTCCTTGATGGGCATGTTAAACCAGTTGTTGGAAGAAAAATCAATTGGATGAAAGCCGGAATTATAGAATCTCATCGAGTTTTAACTGTTAGTCCATACTATGCACAAGAACTAGTGTCAGGCCCAGATAAAGGAGTTGAGTTGGACAACATTCTTCGCCGAGTTGGTGTTACTGGAATCGTAAATGGCATGGATGTTCAGGAATGGAATCCATCCACCGACAAATATATAAGTATCAAATATGATGCCTCAACAGTATTGGAAGGAAAAGCTCTTCTGAAAGAAGAACTGCAAGCAGAAGTTGGATTGCCGGTTGACAGAAGTATTCCTCTCATTGCTTTCATCGGTAGGCTTGAAGAACAAAAAGGTTCTGATATTCTTGTAGAAGCCATTCCCCAATTTATTAAGGAGGATGTTCAAATAGTAGCGCTAGGAACGGGAAAAAAAGAAATGGAAAAGCAACTTCAGCAACTTGAAATATCATACCCTGACAAGGCCAGAGGAGTTGCGAAATTCAATGTTCCCCTAGCTCATATGATGATTGCAGGAGCCGATTTTATCTTGATTCCAAGTAGATTTGAGCCTTGTGGTCTCATTCAGTTACAAGCTATGCGCTACGGAACTGTACCTATTGTTGCCTCGACGGGTGGATTAGTGGACACGGTCAAAGAAGGTTTCACTGGATTTCAGATGGGTTCTTTCAATGTTGAATGTGATGCTGTGGATTCTGCTGATGTGGATGCAATAGCAAAGACTGTCACAAAGGCTCTTGGAGTCTATGGAACTTCAGATTTTGCAGAATTGATCAAGAATTGCATGGCTCAAGATCTTTCATGGAAGGGACCTGCTAAGAAGTGGGAGGAAGTGCTGTTAAGTTTGGGAGTTCCTGACAGTGAACCTGGAATTGATGGAGAAGAAATTGCTCCACAGGCAAAGGAAAATGTCGCAGCTCCATGA 1866 0.4239 MLHCQYTKMATVTASSNIVSRTSHVNIPTVSCESKMGPMRLGSIRKANTHNGLRVLNSLDEILNRTPIKTKGVQSRKKGVQRKSVRPKGIIVCGMNLIFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTVTPRYDQYKDAWDTSVTIEVKVGDRTEKVRFFHCFKRGVDRVFVDHPIFLEKVWGKTGTKLYGPAAGDDYQDNQLRFSIFCQAALEAARVLNLKSNKYFSGPYGEDVIFVANDWHTALISCYMKSMYQSIGIFRNAKVVFCIHNIAYQGRFAFTDYSLLNLPDQFKSSFDFLDGHVKPVVGRKINWMKAGIIESHRVLTVSPYYAQELVSGPDKGVELDNILRRVGVTGIVNGMDVQEWNPSTDKYISIKYDASTVLEGKALLKEELQAEVGLPVDRSIPLIAFIGRLEEQKGSDILVEAIPQFIKEDVQIVALGTGKKEMEKQLQQLEISYPDKARGVAKFNVPLAHMMIAGADFILIPSRFEPCGLIQLQAMRYGTVPIVASTGGLVDTVKEGFTGFQMGSFNVECDAVDSADVDAIAKTVTKALGVYGTSDFAELIKNCMAQDLSWKGPAKKWEEVLLSLGVPDSEPGIDGEEIAPQAKENVAAP 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04182 621 Gene3D Glycogen Phosphorylase B; 97 587 - -
Vivi7g04182 621 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 86 593 - -
Vivi7g04182 621 PANTHER GRANULE-BOUND STARCH SYNTHASE 1, CHLOROPLASTIC/AMYLOPLASTIC 87 598 - -
Vivi7g04182 621 MobiDBLite consensus disorder prediction 600 621 - -
Vivi7g04182 621 FunFam Starch synthase, chloroplastic/amyloplastic 96 372 - -
Vivi7g04182 621 Pfam Glycosyl transferases group 1 413 534 IPR001296 GO:0016757
Vivi7g04182 621 Pfam Starch synthase catalytic domain 97 356 IPR013534 -
Vivi7g04182 621 Gene3D Glycogen Phosphorylase B; 368 578 - -
Vivi7g04182 621 FunFam Starch synthase, chloroplastic/amyloplastic 373 578 - -
Vivi7g04182 621 Hamap Glycogen synthase [glgA]. 95 596 IPR011835 GO:0004373
Vivi7g04182 621 CDD GT5_Glycogen_synthase_DULL1-like 96 595 - -
Vivi7g04182 621 NCBIfam glycogen/starch synthase, ADP-glucose type 95 594 IPR011835 GO:0004373
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04182 Vivi-Chr7 109281634 109286076 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04182 9 621 Glycosyltransferase AT1G32900 70.081 0.0 857
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04182 K13679 - gmx:100037476 1000.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g04182 7 109281634 109286076 Vivi7g04182 7 109281634 109286076 ECH