Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04180 ATGGAACTCGACCTCCGTTCCTTCCTCCCCGACGACACTGATGCCGATGTCCACGTCACCCACCATCGCACCATCGATGAAATTCTCAACGACTGCGATACATCTTCATCCTCATCATCACCCTCTCCTCCTTCCTCTCCTTCTCACAACAACAAACCCACCCAATTTCCTCAACCCGTACCTGTTTCAATTTCCCGGGTCAAACCCGATAAACCTCCCCGCCCATTCTCCTCCCTATTCGGCCGTGTCACTCCCAATGCTAAACCCGGTGCCGCCCTTGCTGCGGCTGCCGCTGCTTCTAGATCCGTTCCGACGCCACATGCGGCGGCGATTATTTCCCGGAGGAAGAGTTCGCAGTCGATCAGAACTGAATCGGATGATTCCGATAAAGGTAGTGAATTGGAAAGGAAAATTGAGAGCAGTGAGAGTGTTTCTTCTGTTGATGAGGGTGAAATTGCAGCAATTGAAGTGAATGGTGCTGCTGATGGTGGTGATATTCAGGTGAAGAATGATTCTCCGGTTGTGAGTGAGGAGAAAAGTGATTTAGATGAGTGTTCTGTTTCTGCTTCCTTGAATCATGATGAAAATGGTCATGATCATGATCATGATCAGGGTTTGAATTTGAATTTGAATTCGACGCCTTTTGATGTTGATGGTGATAATGATGATGGTTTTGGTGAAACAACTAGTCTTGATTATAAGGGAGTTGAAGAAACAGAAGAAGAAATAGTTAATGGTGTTGATGTTGGAGTTAGTGGTGGTTCTGTTGGAGGTATTGAGAATGAAGTTAGTGGTAGAGGAGATGATGATGGGGGTGATGGTGATGATGGTGGTGGTGGTGATGATGATGGTAGTTCAATAGGTGATGTATTTGAACTAGTAGAAGAGACACTTGAGGAATTGGAAAATGTAAATCTTAAAAAGAAAAAACCCGAGTCTTTGAAGAAGCCACTTGATTTAGCAGAGGAATTGGAGAAAAAGAATGCTTCAACTGGTTTGCATTTAGAAGAGGGTGCAGCTGCGCAGCCAATGAGGCTTGAAGGTGTTCGGAGAGGGTCTATTACATTAGGATATTTTGATGTTGATGCTGATAATGCTGTCACAAGGGCCATTTCATCGCAGGCATTCAGGCGTGATCATGGTTCTGCGCAAGTCTTGGTGGTTCATGCTAATTACATTGCAGTTGGAATGACAAAAGGGCTCATTGTTTTAGTGCCGAGTAAATATTCCATTCATCATGCGGATAATACAGATGGAAAGATGTTGATGCTTGGTATACAAGGTGATCGATCACACGCTCCTGTGACGTCCATGTCTTTCAATCAGCAAGGAGATCTTCTTTTAGCCGGTTATGGTGATGGTCATGTTAAACTTTGGGATACCCTGAAAGGGGTTGTGGTTAAAGTTATTAGTGGAGAGCATACAGCACCAGTGGTACATGCTTTTTTTCTAGGACAGGATCCTCAGAATACTCGTCAATTTAAAGCTGTTACGGGTGATTGTAAGGGTCTTGTTCTCTTACATCATATCTCAGTGGTTGTTTTGATTAATAGATTCAACGTCAAAACTCAGTGTCTTCTTGACGGGCAAAGAACGGGCTTGGTGCTATCTGCTTCACCACTCCTTTTAGACGAACTCGGTGGAAGTGCCTCATCTTATTCTCAGGGAAACACCACGGTCTCAACCAGCAGTATAAGTAGCATGGTCGGAGGCGTTGTCGGGGGTGATGCAGGTTGGAAACTCTTCAATGAAGCCTCTTCTCTGGCTGAAGAAGGTGTGGTTGTATTTGTCACCCATCAAACTGCCTTGGTGGTTCGGCTCAGTCCTTCATTGGAAGTCTATGCTCAACTCTCTAGGCCAAATGGGATCCGGGAGGGTTCTATGCCATATACTGCATGGAAGCACATGCCGCAAACAAGTTCTACTGAAGCTGTTGAAAGAGTTTCGTTGCTTGCAATTGCTTGGGAACGGAAAGTTCAGGTTGCAAGATTGGTCAAATCAGAATTAAAAGTATATGGAGAATGGTCTCTTGACAGTGCGGCTATAGGTCTGGCATGGTTAGATGATCAGATGCTGGTAGTGCTCACTTCAACTGGGCAGCTTAATTTATTTGCTAAAGATGGAACTGTGATTCATCAAACAAGTTTTGGTGTGTTTCATCAAACAAATTTTGGTGTAGATGGTATTGGAGGAGAAGAACTACTTTCATATCATACTCACTTCATCAACATTTATGGGAATCCTGAGAAAGCTTATCATAACTCCATAGCTGTAAGAGGAACTTCTATTTATGTACTTGGTCCAACACATCTTGTTGTTTCTCGTCTTCTCCCTTGGAAAGAACGTATTTTGGTTTTACGAAAAGCAGGTGACTGGATGGGTGCCTTGAACATGGCAATGACTCTTTACGACGGCCATGCTCATGGGGTTGTTGATCTACCTAGAACCTTGGATGCGATACATGAGGCTATAATGCCCTTCTTGGAGGAGTTGCTTACATCATATGTTGACGAAGTGTTCTCCTATATTTCAGTGGCTTTCTGCAACCAAATTGGAAAACCTGATCAATCCAATGATTCAAATAGTAGAAGTAATTCAGTACACTCTGAAATAAAGGAACAATTCACCCGGGTTGGTGGAGTTGCTGTTGAATTTTGCTGTCATATAAAACGGACAGACATCCTTTTTGATAAAATTTTCTCCAAGTTCGTGGATGTTCATGTTCAACAGAGAGAAACATTTTTGGAGCTTCTGGAGCCATATATTTTGAAGGACATGCTTGGATCTCTACCTCCTGAGATTATGCAAGAACTGGTGGAGTATTATAGCACTAAAGGGTGGTTACAGCGGGTTGAGCAATGTGTGCTTCACATGGATATTTCATCCTTGGATTTTAATCAGGTTGTTAGATTATGCCGGGAGCATGGACTATATAGTGCTCTGGTGTATCTCTTTAATAAAGGCTTAGATGATTTTAGAGCACCTCTTGAGGAGCTCTTTGCAGTTCTACAAAATAGCCAGAAGGAAAATGCTAAGGCACTTGGGTATAGAATGCTGGTTTATCTCAAGTACTGTTTTATAGGTCTTGCCTTTCCTCCAGGCCATGGAACTATTCCTCCTACACGGTTGCCATCTCTTAGAAAAGAACTTGTAGAGTTTTTGTTAGAGGATTCCAGTGCTATAAGATCACGGACTGCTTCAGATTCCGTGTCCAAACAGCCTTACCTGAATCTATATCTTCTCTTAGAGTTAGACACCGAAGCTACATTAGATGTCCTCCGATGTGCTCTCATGGAAGATAAAATTTCAAATTCCAGCTCATCTTCACTGGATTCAGCTGATAAACCCATCGAAGAAGAAAACAAAGAAAATAATAATGTTACTGAAACTGAAAATATTTTGGTTCAGAATACAGTGGATGCTCTTATTCAAATAACTGATATGAATGTTGCTCCATCGGATACAACCTCTAGTAGTGGTGATGACGGATCAACAAAAGAGTGGCCTTCAAAGGATAAAGGCTGTCTGTTTGAGTTCATAGCTTATTATGTTGCTCGCCAAAGAGCTAAAGTTTCAAAGGGCATGCTTTGTCGAATATTGGAATATCTGACATTGGATAATCAATTTTTAGCTAATGTTTCTTCTCATAGTTCAACTCCAAAAAATAGAGAGAAGCAAGTGCTTGCACTTCTGGAAGTAGTTCCTGAGTCCGATTGGGATGTTCCATTTTTGCTAGACTTATGTGAGAGAGCCAAATATTATCAGGTTTGTGGATTGATTCATTCCATCAGACATGAGTACGTGGCTGCATTGGATAGCTATATGAAGGATGTAGACGAGCCTGTTCATGCCTTCTCCTTTATCAACAAAGCATTCTCACAGTTGATTGGCAATGACCGTGCTGCTATTCGATCAGCAGTCCTATCTCGAATTCCTGAATTGGTTGAACTAAGCAGGGAAGGTGCATTCCATTTAGTTACCAGACATTTTACTGATGAAAGTTCCCATATCATCACTAAACTTCATTCTCATCCAAGAAGTCTTTTTCTTTATTTAAAGACACTCATCGAGCTTCATTTATTTGGCACCCTAGACTTGTCTAATTTGACAAAGGATGTTTTTACAAACCACCCTAATGGAAAGCAGGATAAGGATCTCCCACAAGGAATCCATGATTACTTAGAAAATATATCCGATTTCCCCAAGTATATGCGTGAAAATCCTAGTCATGTGCCTGATGATCTTATTGAGCGTTACCTAGAGCTGTTATGCCAGTATGAACGGGGTTCAGTTCTAAAGTTTCTAGAAATGTTTGATAGCTATCGTGTGGAACATTGTTTACGCCTGTGCCAAAAATATGGCATTATAGATGCTGCCGCTTTCTTATTGGAAAGGGTTGGTGATGTTGGTAGTGCTCTTTCACTTACACTTTCTGATCTGAATGATAAATTTGTTGAGCTTGATGCTGCTGTGGAAGCTGTAGTGTTGAACCATCCCAAGCTAGATTCTTCTCATATGGAAGTATTCAACATTGTTTTAAGAACAAAAGAGGTGAATATCATGTATGATTTATTGCATGCCTGTATCGGTCTATGTCAGCGGAACACCCCTCGTCTAAATCCTGAGGAGTCAGAGGCACACTGGTTTAAATTACTTGACTCGTTTTGTGACCCATTGATGGATTCATATGTTGAAGAGAGAGCATATAAAAGAAACAATTATTTTGGCGTGCTAGCTGGATCAGCAGATTCACAACCGGACAAAGACACCTATAAAAGCAGTTGGAAGATTTCTCAGTCCCGAAATGGTGATCTCTTGAGAAAATTGTTATCCCAATTCATTAAAGAGATTGTTGAGGGAATGATAGGTTATGTTCACCTTCCAGCTATCATGTCCAAACTCTTGTCTGATAATGGTAGTCAAGAATTTGGCTATTTTAAACTTACCATATTGGGGATGCTGGGAACATATGGCTTTGAAAGAAGAATTCTGGATGCTGCAAAATCTTTGATAGAGGATGATACATTCTATACGATGAGTTTACTCAAGAAAGGAGCCACCCATGGATTCGCTCCCAAGAGTTCAGTGTGCTGTATTTGTAATTGCCTCCTTACAAAGAATGCAGTCACCACCGGAATTAGAATTTTCAACTGTGGCCATGCGATTCATCTCCACTGTGAAGCCTCTGAAGTCGAGTCGTCAAGCAAAGGATCTTCATCTGGATGCCCTATATGCTTGCCTAACCAAAAACCCCAGAAGTCTAGAAACAAATCAATCGTTACAGAGAATGGTTTGGTCAATAGATTCTCATCAAGGCGCCAGCCCCCTCATTATGGTAGTACAATTCATCACCATGACAATGATTTATCAGAGAATATGTATGGAGGACAACAACAGATATCACGGTTTGAGATCTTGAGCAGCTTGCAGAAAAATCAAAGATTTATGCAATTCGAAAACTTGCCTCCATTGAGGCTTGCCCCACCTGCTGTGTACCATGAAAAGGTAAGTAAAGTAGCACACTATCAGACTGGAGAAAGTAGCAGCAGTTCTTCAGTTATAGAGAAACATAGTCGTCAAAAACAAAACCGGGAGCTAAGAGTTAGAGGTTCTTCGATTCGTTTTCCTTTGAAGTCAAGTTTTTTTGGCAAGGAAAAGACGAATAAGCGATGA 5673 0.416 MELDLRSFLPDDTDADVHVTHHRTIDEILNDCDTSSSSSSPSPPSSPSHNNKPTQFPQPVPVSISRVKPDKPPRPFSSLFGRVTPNAKPGAALAAAAAASRSVPTPHAAAIISRRKSSQSIRTESDDSDKGSELERKIESSESVSSVDEGEIAAIEVNGAADGGDIQVKNDSPVVSEEKSDLDECSVSASLNHDENGHDHDHDQGLNLNLNSTPFDVDGDNDDGFGETTSLDYKGVEETEEEIVNGVDVGVSGGSVGGIENEVSGRGDDDGGDGDDGGGGDDDGSSIGDVFELVEETLEELENVNLKKKKPESLKKPLDLAEELEKKNASTGLHLEEGAAAQPMRLEGVRRGSITLGYFDVDADNAVTRAISSQAFRRDHGSAQVLVVHANYIAVGMTKGLIVLVPSKYSIHHADNTDGKMLMLGIQGDRSHAPVTSMSFNQQGDLLLAGYGDGHVKLWDTLKGVVVKVISGEHTAPVVHAFFLGQDPQNTRQFKAVTGDCKGLVLLHHISVVVLINRFNVKTQCLLDGQRTGLVLSASPLLLDELGGSASSYSQGNTTVSTSSISSMVGGVVGGDAGWKLFNEASSLAEEGVVVFVTHQTALVVRLSPSLEVYAQLSRPNGIREGSMPYTAWKHMPQTSSTEAVERVSLLAIAWERKVQVARLVKSELKVYGEWSLDSAAIGLAWLDDQMLVVLTSTGQLNLFAKDGTVIHQTSFGVFHQTNFGVDGIGGEELLSYHTHFINIYGNPEKAYHNSIAVRGTSIYVLGPTHLVVSRLLPWKERILVLRKAGDWMGALNMAMTLYDGHAHGVVDLPRTLDAIHEAIMPFLEELLTSYVDEVFSYISVAFCNQIGKPDQSNDSNSRSNSVHSEIKEQFTRVGGVAVEFCCHIKRTDILFDKIFSKFVDVHVQQRETFLELLEPYILKDMLGSLPPEIMQELVEYYSTKGWLQRVEQCVLHMDISSLDFNQVVRLCREHGLYSALVYLFNKGLDDFRAPLEELFAVLQNSQKENAKALGYRMLVYLKYCFIGLAFPPGHGTIPPTRLPSLRKELVEFLLEDSSAIRSRTASDSVSKQPYLNLYLLLELDTEATLDVLRCALMEDKISNSSSSSLDSADKPIEEENKENNNVTETENILVQNTVDALIQITDMNVAPSDTTSSSGDDGSTKEWPSKDKGCLFEFIAYYVARQRAKVSKGMLCRILEYLTLDNQFLANVSSHSSTPKNREKQVLALLEVVPESDWDVPFLLDLCERAKYYQVCGLIHSIRHEYVAALDSYMKDVDEPVHAFSFINKAFSQLIGNDRAAIRSAVLSRIPELVELSREGAFHLVTRHFTDESSHIITKLHSHPRSLFLYLKTLIELHLFGTLDLSNLTKDVFTNHPNGKQDKDLPQGIHDYLENISDFPKYMRENPSHVPDDLIERYLELLCQYERGSVLKFLEMFDSYRVEHCLRLCQKYGIIDAAAFLLERVGDVGSALSLTLSDLNDKFVELDAAVEAVVLNHPKLDSSHMEVFNIVLRTKEVNIMYDLLHACIGLCQRNTPRLNPEESEAHWFKLLDSFCDPLMDSYVEERAYKRNNYFGVLAGSADSQPDKDTYKSSWKISQSRNGDLLRKLLSQFIKEIVEGMIGYVHLPAIMSKLLSDNGSQEFGYFKLTILGMLGTYGFERRILDAAKSLIEDDTFYTMSLLKKGATHGFAPKSSVCCICNCLLTKNAVTTGIRIFNCGHAIHLHCEASEVESSSKGSSSGCPICLPNQKPQKSRNKSIVTENGLVNRFSSRRQPPHYGSTIHHHDNDLSENMYGGQQQISRFEILSSLQKNQRFMQFENLPPLRLAPPAVYHEKVSKVAHYQTGESSSSSSVIEKHSRQKQNRELRVRGSSIRFPLKSSFFGKEKTNKR 1890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04180 1890 MobiDBLite consensus disorder prediction 1104 1126 - -
Vivi7g04180 1890 MobiDBLite consensus disorder prediction 163 217 - -
Vivi7g04180 1890 MobiDBLite consensus disorder prediction 112 150 - -
Vivi7g04180 1890 MobiDBLite consensus disorder prediction 30 61 - -
Vivi7g04180 1890 MobiDBLite consensus disorder prediction 119 144 - -
Vivi7g04180 1890 PANTHER VACUOLAR PROTEIN SORTING VPS41 296 1820 IPR045111 GO:0006623
Vivi7g04180 1890 Pfam WD domain, G-beta repeat 431 460 IPR001680 GO:0005515
Vivi7g04180 1890 ProSiteProfiles Trp-Asp (WD) repeats profile. 435 469 IPR001680 GO:0005515
Vivi7g04180 1890 SUPERFAMILY WD40 repeat-like 417 711 IPR036322 GO:0005515
Vivi7g04180 1890 SMART WD40_4 419 460 IPR001680 GO:0005515
Vivi7g04180 1890 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 428 460 - -
Vivi7g04180 1890 MobiDBLite consensus disorder prediction 1842 1871 - -
Vivi7g04180 1890 Pfam Golgi CORVET complex core vacuolar protein 8 913 1096 IPR025941 -
Vivi7g04180 1890 MobiDBLite consensus disorder prediction 248 287 - -
Vivi7g04180 1890 SUPERFAMILY RING/U-box 1690 1748 - -
Vivi7g04180 1890 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 1358 1518 IPR000547 GO:0006886|GO:0016192
Vivi7g04180 1890 MobiDBLite consensus disorder prediction 1842 1856 - -
Vivi7g04180 1890 Gene3D - 346 517 IPR015943 GO:0005515
Vivi7g04180 1890 ProSiteProfiles Zinc finger RING-type profile. 1697 1745 IPR001841 -
Vivi7g04180 1890 MobiDBLite consensus disorder prediction 29 85 - -
Vivi7g04180 1890 MobiDBLite consensus disorder prediction 1769 1792 - -
Vivi7g04180 1890 Pfam Region in Clathrin and VPS 1386 1483 IPR000547 GO:0006886|GO:0016192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04180 K20178 - gmx:100780869 2634.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g04180 7 109254364 109264333 Vivi7g04180 7 109254364 109264333 ECH