Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04165 ATGGCCTTAATCTCATCTTCTTCTCTCACTACTAACCTTTTTGATTGCAAAGCTCCTTTTCAATCATCACCTTCTTCTCCACAATGTATGAGACTAACCTCTCTTCCATCACTCCCTTTGTTGTCTCAGAATCATGCAGTGAAGACAAATTCTCATTATAGAAAGATTGGTCGTGATGTTATGGTAATGGCCACTGGTGATGCACCAGCAGATGTTGACTCAACTGAGCTACCTGAGTTTGTTAAGTCTCTTCAACAAACCTGGGACAAAGTTGATGATAAATATGCTGTGAGTACATTGATTGTAGCTGGTGTGATTGCACTATGGAGTTCAACTGGTTTGATTTCAGCAATTGATAGGCTTCCCTTGATTCCTGGAGTTCTTGAATTAGTAGGCATTGGCTACTCCGGGTGGTTTGCATACAAGAACTTAGTTTTCAAACCAGAAAGGGAAGAGCTTGTACAGAAAGTAAAGGAAACGGTTAATGAAATAATTGGGAGCAAATAA 507 0.3984 MALISSSSLTTNLFDCKAPFQSSPSSPQCMRLTSLPSLPLLSQNHAVKTNSHYRKIGRDVMVMATGDAPADVDSTELPEFVKSLQQTWDKVDDKYAVSTLIVAGVIALWSSTGLISAIDRLPLIPGVLELVGIGYSGWFAYKNLVFKPEREELVQKVKETVNEIIGSK 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04165 168 PANTHER - 28 167 IPR033344 GO:0009579
Vivi7g04165 168 Pfam CAAD domains of cyanobacterial aminoacyl-tRNA synthetase 83 166 IPR025564 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04165 Vivi-Chr7 109059618 109061411 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04165 - - aprc:113849332 228.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g04165 7 109059618 109061411 Vivi7g04165 7 109059618 109061411 ECH