Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04153 ATGGTGGTAGCTGCTGGCTCCAAGTTCAATAATTTGAGAAGAGGGAACAGTGCTTCTTGTTCTTCTCATAATGTTGTTATCAATGATTATAGTAATAGTAATAATAGCTGTGATGGAGATTTTTCTAGAGTAAATAGAAGTGGTTGTTTTTCATCAATGGTGGATGTTGTTGATAAAGACTCTTCTTGTGTTTCCTTCACTACTTTTAATATCCTTGCTCCTATTTACAAACGGGTTGATCCACAGAATCAAGGACTTAGAGAAAGTGATTTCAGATCATTTTGGTTGGCTAGGAATCAAAGGATTCTTGATTCATTGCTTTCTGAATCATCTTCTATCATGTGTCTACAGGAATTTTGGGTTGAAAGTGAAGAACTAGTTCACATGTATGAGGAGAGACTTGGGGATGCTGGCTACCAACTCATCAAGCTTGCTCGAACCAACAACCGTGGAGACGGTCTGCTGACTGCTATACGCAAAGAACATTTAAGAATCATAAATTATCGAGAATTGCTTTTCAATGATTGCGGTGACCGTGTTGCTCAGTTGTTACATGTTCGATCAGTTAATCCCATTTTTCAAAACCAAATAGAAAGTGTTCACCAAGAGTTTCTGATTGTGAATACACACTTGCTTTTTCCTCATGATTCAAGTCTGTCTATAGTGAGATTGGACCAGGTTTATCAAATATTACAATATGTGGAATTGTATCAGAGAGAAAACCGGCTCAAACCACTGCCTATTATTCTATGCGGCGATTGGAACGGAAGCAAGCGAGGACATGTTTACAAGTTCCTTAGGTCGCAGGGTTTTGTATCATCATACGATATTGCAAATCAATATACTGATAGTTATGCAGACGCACACAAGTGGGTTAGTCACAGAAATCATAGAGGAAATATATGTGGCGTTGATTTCATTTGGCTTTGTAATCCTAACCAAACACGGAAACCCTTGAAAACAAGTTGGGCTGAAGCTGTATTTAGTATACTAAAGTTCCAGCTTCGGAAGGTATTATTGTCTGAAGATGACACATTTACCTTTTTGAAAGGCGACAACTGTGCTGATTCCGTTAAAGCATTTACCTTTTTAAAGGGCAACAACTGTGTTGATTCTGTTACGTATGTTAGTTTTTCTGAAGCACTCCGTAAGGTTAAGTTAATTGGCGTGCCTTATGGACTATGCTTTCAACAGTTGCAAGATCTATGGAATCAAGCTGATGTAGATGGAAATGGTGTCATCGACTTTGAAGAATTCAAGCAAAAGATTTGGAATTCTACATGTTCAGAGCACGTGTTGGAAAATTTCAATGGATGCATGGAGAATTCTAAAACTGAGCAGGAGCTAGAAGCCATTGGTTTTAAAGTGAAGAATGCGATGTTGTTTCCGCGTGAAATGGAGAAAGGACGCTGGCCTGAAGATTACTCTCTTTCTGATCATGCTAGGTTAACTGTTGTATTTTCACCGGCAAAAATGTCACACCTTTCATGA 1491 0.385 MVVAAGSKFNNLRRGNSASCSSHNVVINDYSNSNNSCDGDFSRVNRSGCFSSMVDVVDKDSSCVSFTTFNILAPIYKRVDPQNQGLRESDFRSFWLARNQRILDSLLSESSSIMCLQEFWVESEELVHMYEERLGDAGYQLIKLARTNNRGDGLLTAIRKEHLRIINYRELLFNDCGDRVAQLLHVRSVNPIFQNQIESVHQEFLIVNTHLLFPHDSSLSIVRLDQVYQILQYVELYQRENRLKPLPIILCGDWNGSKRGHVYKFLRSQGFVSSYDIANQYTDSYADAHKWVSHRNHRGNICGVDFIWLCNPNQTRKPLKTSWAEAVFSILKFQLRKVLLSEDDTFTFLKGDNCADSVKAFTFLKGNNCVDSVTYVSFSEALRKVKLIGVPYGLCFQQLQDLWNQADVDGNGVIDFEEFKQKIWNSTCSEHVLENFNGCMENSKTEQELEAIGFKVKNAMLFPREMEKGRWPEDYSLSDHARLTVVFSPAKMSHLS 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04153 496 ProSiteProfiles EF-hand calcium-binding domain profile. 394 429 IPR002048 GO:0005509
Vivi7g04153 496 Gene3D - 370 469 - -
Vivi7g04153 496 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 33 487 - -
Vivi7g04153 496 SUPERFAMILY EF-hand 373 423 IPR011992 -
Vivi7g04153 496 Gene3D Endonuclease/exonuclease/phosphatase 50 347 IPR036691 -
Vivi7g04153 496 ProSitePatterns EF-hand calcium-binding domain. 407 419 IPR018247 -
Vivi7g04153 496 SUPERFAMILY DNase I-like 58 287 IPR036691 -
Vivi7g04153 496 Pfam Endonuclease/Exonuclease/phosphatase family 95 279 IPR005135 GO:0003824
Vivi7g04153 496 FunFam Putative calcium-binding protein 47 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04153 Vivi-Chr7 108726408 108729895 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04153 129 492 EF-hand Containing Proteins AT1G02270 63.462 1.61e-167 475
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04153 - - psat:127076166 926.391
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g04153 7 108726408 108729895 Vivi7g04153 7 108726408 108729895 ECH