LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi7g04136	ATGAAGCAGAAAGAGTTGACTTTCTTGCTCTGCCTCATATGGGCACTAACCTTACTCTATGGTGAAATGTTCGCTTACTGGCTTCCATCTTTCTTCACCTGTTCTTGGCCCCATTTGAAGGTTCAAACAAAGAGTGAGAGTTACCAAAATGATTATGTAAAAGTTGCTGTTATTACAGATCCACAGCTCGTGGATAAAACTTCTCTCCGTCTTCCTGAGAAATCTCTTGCACTAGAGCTTGTTAAATTCTACACCGATTTAAACATGAGGAGATCATTCTTTTCATCTATCCTTCCTTTCAAACCTGATGTCATATTGTTTTTAGGGGATTACTTCGATGGAGGTCCTTATTTATCTGACGAAGAATGGGAGGAGTCTTTCAATCGCTTTAAACATATATTTGGCTTGAATGCACAAGGAAAATACAAAGACAAGCAAGTTTACTTTATTTCTGGAAACCATGATATTGGTTATGAAAGTCTTCATTATGAAAAGCCAAAGGTTATCAGACGCTATGAAGAAACGTTTGGGATTAGAAACTACAAGTTTACAGTTGGAAAATTGGATTTTATTGCAGTTGATGCACAAACTCTTGATGGACACCCAGAAAAGCATCTGATTTCTCAAGTTTGGGAGTTTGTAAAGAATATCTCTGTAGATAATGCAATTCGTCCAAGAGTCTTATTAACACACATTCCTTTATATCGACCGGATGATACTGACTGTGGCCCTGATCGTAGTTCCCCAATTATCAATCAGAGGATAAATATTGCTTGGTATGATAAGAGTAACAATATAATATATCAGAATTATGTTTCTGAGAAGTCATCAAAGCATTTACTAGATACTATCAAACCTAAGTTTATTTTATCAGGCCATGATCACGATCAATGCACCATCACTCATCAATCTAAAACCGGGCCTGTAAAGGAGCACACTCTAGGTACTATAAGTTGGCAACAAGGAAATTGGTATCCTTCTTTCATGCTCTTATCAGTCGATAACTCCACTCTTCGAAATGCTTCCATTCCCGAAGAGCCTTTGATGACTCATCTATGTTACCTTCCAAAGCAGTTTCACATTTATATGTGGTATATTGTGCTATTTGGTTTTACCCTTCTTGCCCTCCTATTTTGGCCAACAAGTAGTACAAGTTTCTGGCATCAGTGTAGGAACTTGGCGGGCCATTTTAAACAACTTATAGCTTCTATCGTATCGAGAAATGAAACAAAAGAGAAAGACGAAGATGCCAACTATGAATATGAGATGATGTGGGATGCAGAAGGCTCAATGCATCTTATAAAGAAACCCTTGAAGGCATCTCCTTCAAATTCTAACGAAAGAAGCTTAGGAGAAAGGGGTAATGTTGTAATGCGGCCAACTGCTAGAAAAAATACTGGTCAAGAAGGAGACTTCTCGATGAATATGGATATGGCTTCAAGCACCGGGCTTGATCCTCTAGCAAGAATACCTCCAAGAACAGGCAAATCAAGGACAACAATTATAATCCAAAGATTACTACGCACGCTGCGAATGCTGACCGTTATCGCAGCAGTCAACGTTCCTCTTTACATGATGTTGCTATTCAAGGATTGGATTGACAAGTAA	1608	0.385	MKQKELTFLLCLIWALTLLYGEMFAYWLPSFFTCSWPHLKVQTKSESYQNDYVKVAVITDPQLVDKTSLRLPEKSLALELVKFYTDLNMRRSFFSSILPFKPDVILFLGDYFDGGPYLSDEEWEESFNRFKHIFGLNAQGKYKDKQVYFISGNHDIGYESLHYEKPKVIRRYEETFGIRNYKFTVGKLDFIAVDAQTLDGHPEKHLISQVWEFVKNISVDNAIRPRVLLTHIPLYRPDDTDCGPDRSSPIINQRINIAWYDKSNNIIYQNYVSEKSSKHLLDTIKPKFILSGHDHDQCTITHQSKTGPVKEHTLGTISWQQGNWYPSFMLLSVDNSTLRNASIPEEPLMTHLCYLPKQFHIYMWYIVLFGFTLLALLFWPTSSTSFWHQCRNLAGHFKQLIASIVSRNETKEKDEDANYEYEMMWDAEGSMHLIKKPLKASPSNSNERSLGERGNVVMRPTARKNTGQEGDFSMNMDMASSTGLDPLARIPPRTGKSRTTIIIQRLLRTLRMLTVIAAVNVPLYMMLLFKDWIDK	535

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi7g04136	535	CDD	MPP_Cdc1_like	56	322	-	-
	Vivi7g04136	535	FunFam	Calcineurin-like metallo-phosphoesterase superfamily protein	80	337	-	-
	Vivi7g04136	535	PANTHER	METALLO PHOSPHOESTERASE RELATED	1	460	IPR033308	GO:0006506
	Vivi7g04136	535	Gene3D	-	90	350	IPR029052	-
	Vivi7g04136	535	Pfam	Calcineurin-like phosphoesterase	54	296	IPR004843	GO:0016787
	Vivi7g04136	535	SUPERFAMILY	Metallo-dependent phosphatases	51	357	IPR029052	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vivi7g04136	Vivi-Chr7	108423654	108429100	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi7g04136	K23362		-	gmx:100776604	882.478