Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04126 ATGGCGGATAAAGCATGTATCAAGCGTCTTCAGAAGGAGTATAGAGCCCTTTGTAAAGAGCCAGTTTCCCATATCGTGGCCCGTCCTTCACCAAGTGATATTCTTGAGTGGCACTACGTATTGGAAGGAAGCGAGGGAACACCTTTCTCAGGTGGTTTTTACTATGGGAAAATCAAGTTTCCTCCAGAATATCCATATAAACCTCCTGGAATCAGCATGACAACACCCAATGGGAGGTTCATGACACAGAAAAAGATCTGTTTATCTATGAGCGATTTTCATCCTGAAAGTTGGAACCCAATGTGGTCTGTATCAAGCATACTTACCGGGCTTCTTTCATTTATGATGGACACCAGTCCAACCACAGGCAGTGTAAACACCACTACTGCCGAGAAGCAGCGTCTTGCAAAATCTTCACTCTCTTTCAATTGCAAGAATGCAACATTCAGGAAAATGTTCCCAGAGTACGTGGAGAAGTACGAACAGCAGCAGCTTTCTGAGCAAACTGCTTCTGAGCAGCGGGTATCATCAGACGCTCGTCAAGATAAAAGTTCAAATTCTGTTTCAGAAAGGAATTCAGACTCCGCAGGAGAAGACATGAAAAGGGTAGAGGGATTGAAGGACATGAGGAGAAACAAAAAACAGGCATTTCCAACATGGATGATGTTATTACTCTTCTCCATCTTTGGGGTTGTTATGGCATTACCTTTACTTCAGCTGTGA 723 0.4357 MADKACIKRLQKEYRALCKEPVSHIVARPSPSDILEWHYVLEGSEGTPFSGGFYYGKIKFPPEYPYKPPGISMTTPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTAEKQRLAKSSLSFNCKNATFRKMFPEYVEKYEQQQLSEQTASEQRVSSDARQDKSSNSVSERNSDSAGEDMKRVEGLKDMRRNKKQAFPTWMMLLLFSIFGVVMALPLLQL 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04126 240 MobiDBLite consensus disorder prediction 164 205 - -
Vivi7g04126 240 SUPERFAMILY UBC-like 6 157 IPR016135 -
Vivi7g04126 240 SMART ubc_7 8 162 - -
Vivi7g04126 240 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 5 162 IPR000608 -
Vivi7g04126 240 Gene3D Ubiquitin Conjugating Enzyme 1 178 IPR016135 -
Vivi7g04126 240 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 7 164 - -
Vivi7g04126 240 CDD UBCc 7 157 IPR000608 -
Vivi7g04126 240 FunFam Ubiquitin-conjugating enzyme E2 34 1 177 - -
Vivi7g04126 240 Pfam Ubiquitin-conjugating enzyme 9 131 IPR000608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04126 Vivi-Chr7 108237852 108241743 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04126 1 240 Miscellaneous Gene Families AT1G17280 77.083 1.90e-140 391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04126 K04554 - gmx:100778181 423.705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g04126 7 108237852 108241743 Vivi7g04126 7 108237852 108241743 ECH