Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04123 ATGAGAGAACCCAGAGATGCAACCAAAGCCGATGTCAAAACCTCCAAACCCGCATCTTCTGGCTCGTTCCCTCTCATTCTCGACATCGATGACTTCAAGGGGGATTTCTCGTTCGATGCTTTGTTTGGGAACTTAGTGAACGAGCTTCTTCCGTCTTTCAAATTAGAAGACCTTGAATCGGAAGGTGCTGATTCTCTGCCGAACGGTCATCTAAGGGATGCAAATAAGTATTCACAAGGGGTTACCAGTCCTTTGTTTCCTGAGGTTGAGAAGCTCTTGTCTTTGTTCAAGGATTCTTGCAAGGAACTCCTCGAGCTACGTAAACAGATTGATGGGAGACTACACAATCTTAAGAAAGATGTTTCTGTTCAAGACTCTAAGCATAGGAGGACACTAGCTGAGCTAGAGAAAGGTGTAGATGGGTTGTTTGAAAGCTTTGCAAGGTTGGATTCACGTATTTCAAGTGTTGGTCAGACAGCTGCGAAGATAGGAGATCATCTCCAGAGTGCAGATGCTCAGCGAGAGACTGCCAGTCAAACTATTGAGCTGATAAAATACTTAATGGAGTTCAATAGCAGCCCTGGTGATCTGATGGAGCTTTCTCCTCTTTTTTCTGATGATAGCCGTGTTGCCGAGGCCGCTTCAATTGCTCAAAAATTGCGGTCATTTGCCGAAGAAGATATTGGAAGACATGGTATAACTGTCCCATCAGCGGTGGGAAATGCAACTGCTAGCCGGGGATTAGAAGTTGCAGTTGCTAATTTACAGGAGTACTGTAATGAACTGGAGAATAGATTGCTTTCTCGGTTCGATGCAGCGTCACAGAAAAGAGAATTGACCACAATGGCAGAATGTGCCAAAATTTTGTCTCAGTTCAACAGGGGCACAAGTGCCATGCAACATTATGTGGCAACACGTCCAATGTTTATTGATGTGGAAGTAATGAATGCAGACACTAGGCTGGTTCTTGGTGAACAGTCTGCACAAAGTAGTCCTAATAATGTTGCTCGTGGGCTTGCCTCCTTGTACAAAGAAATCATAGACACTGTCCGTAAAGAGGCTGCAACAATCACTGCTGTATTCCCTTCACCCAGTGAAGTTATGTCAATTTTAGTTCAGCGTGTTTTAGAGCAGCGAGTCACCGCCCTTCTGGACAAACTATTAGTTAAACCATCTCTTGTGAATTTACCTTCCATGGAGGAAGGTGGGCTCCTATTCTATATTCGAATGCTGGCGGTGGCGTATGAAAAAACCCAAGAAATTGCTAGAGATCTCCGAGTTGTAGGATGCGGTGACTTGGATGTTGAAGGCCTGACAGAGTCCCTGTTTTCAAATCACAAGGATGAATATCCTGAATATGAGCAGGCATCTCTCAGACAATTATATAAAGTGAAGATGGAAGAATTGCGAGCTGAAAGCCAGATTTCTGATTCATCTGGGACTGGGACAATTGGACGTTCAAAGGGAGCTGCAGTAGCTTCTTCTCAGCAGCAAATATCTGTCACTGTCGTAACAGAGTTTGTACGTTGGAATGAAGAAGCAATCTCAAGATGCAATCTCTTTTCCTCCCAGCCTGCTACACTGGCATCCCATGTAAAAGCAGTGTTTACTTGCCTGTTAGACCAAGTTAGTCAATATGTAGCAGAAGGTCTTGAACGGGCTAGAGATGGACTGACTGAAGCAGCTAATTTGAGGGAAAGATTTGTGCTGGGTACAAGTGTTAGCCGTCGGGTAGCTGCTGCAGCTGCATCTGCTGCGGAGGCCGCGGCTGCAGCTGGTGAAAGCAGTTTTAGATCTTTCATGGTTGCTGTACAACGTTCGGGAAGCAGTGTTGCTATTATTCAACAATACTTTACCAATTCTATATCTAGACTTTTGCTTCCTGTGGATGGTGCACATGCTGCTGCTTGTGAAGAAATGGCTACAGCAATGTCCAGTGCAGAGGCTGCTGCTTACAAAGGATTACAACAGTGTATTGAAACTGTCATGGCTGAGGTAGAGCGTCTGCTTTCAGCTGAGCAAAAGGCTACAGATTATAAGTCACCTGATGATGGAATGGCTCCTGATCACCGGCCAACTACTGCCTGCACAAGGGTTGTGGCTTATCTTTCTCGGGTGCTGGAGTCTGCATTCACTGCTTTAGAAGGTCTTAACAAACAAGCATTTTTGTCTGAACTGGGAAATCGCTTGCATAAAGTTCTGCAAAACCATTGGCAAAAATATACTTTCAACCCAAGTGGGGGTTTGCGATTGAAGCGTGACATTACTGAGTATGGAGAATTTGTGCGGAGTTTCAATGCTCCCTCTGTTGATGAAAAATTTGAATTGTTGGGCATAATGGCCAATGTCTTCATTGTTGCTCCTGAGAGCCTTTCAACTTTGTTTGAGGGTACGCCCAGCATTCGGAAAGATGCGCAAAGGTTTATTCAACTTCGAGAGGACTTTAAGAGTGCCAAGCTTGCATCCAAATTGAGTTCCCTGTGGTCTTAA 2490 0.4474 MREPRDATKADVKTSKPASSGSFPLILDIDDFKGDFSFDALFGNLVNELLPSFKLEDLESEGADSLPNGHLRDANKYSQGVTSPLFPEVEKLLSLFKDSCKELLELRKQIDGRLHNLKKDVSVQDSKHRRTLAELEKGVDGLFESFARLDSRISSVGQTAAKIGDHLQSADAQRETASQTIELIKYLMEFNSSPGDLMELSPLFSDDSRVAEAASIAQKLRSFAEEDIGRHGITVPSAVGNATASRGLEVAVANLQEYCNELENRLLSRFDAASQKRELTTMAECAKILSQFNRGTSAMQHYVATRPMFIDVEVMNADTRLVLGEQSAQSSPNNVARGLASLYKEIIDTVRKEAATITAVFPSPSEVMSILVQRVLEQRVTALLDKLLVKPSLVNLPSMEEGGLLFYIRMLAVAYEKTQEIARDLRVVGCGDLDVEGLTESLFSNHKDEYPEYEQASLRQLYKVKMEELRAESQISDSSGTGTIGRSKGAAVASSQQQISVTVVTEFVRWNEEAISRCNLFSSQPATLASHVKAVFTCLLDQVSQYVAEGLERARDGLTEAANLRERFVLGTSVSRRVAAAAASAAEAAAAAGESSFRSFMVAVQRSGSSVAIIQQYFTNSISRLLLPVDGAHAAACEEMATAMSSAEAAAYKGLQQCIETVMAEVERLLSAEQKATDYKSPDDGMAPDHRPTTACTRVVAYLSRVLESAFTALEGLNKQAFLSELGNRLHKVLQNHWQKYTFNPSGGLRLKRDITEYGEFVRSFNAPSVDEKFELLGIMANVFIVAPESLSTLFEGTPSIRKDAQRFIQLREDFKSAKLASKLSSLWS 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04123 829 Gene3D - 662 824 - -
Vivi7g04123 829 Coils Coil 100 120 - -
Vivi7g04123 829 Pfam Exocyst complex component Sec10 140 473 IPR009976 GO:0005737
Vivi7g04123 829 Pfam Exocyst complex component Sec10 493 823 IPR009976 GO:0005737
Vivi7g04123 829 PANTHER SEC10 25 818 IPR009976 GO:0005737
Vivi7g04123 829 Coils Coil 245 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04123 Vivi-Chr7 108140485 108153036 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04123 K19984 - gmx:100820430 1399.8