Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04071 ATGGACGAAGAAATGTCAATGGCTTCTCCTTTCTTCGATCCTCAAGACCTCTCTGCACGAGAGTTTCGCAGATACGGGAAGAGGCACTTAAATTCAGGCGATACAGTTCAGCCAGATTACTCGGCTTCCAAGCTAAGTGAAAGTGGGCTGTTTTACGATGGACAAAACATCCATAGTCCTACTAATGCCGCCCTTATTCTTGAAAATATTAAACAAGAGGTTGAGAGTCTTGATGCTGATTATTTGGATGATAAGTCTTTGTATTCCTCTAGAAGGAGGTTGTCTGCTGATGTTCCTGGTATCCCTGGCATGGATGATGGTTTTGACTCGGGACGGTATTCGTTAAAGGTTTGCAAGCAAGAAGGCGACTCGTTGGGAGATGATGTGGAGAATATATTTAATTTGTTTGCTTCTCTTTTTGATTCTTCTTTGACAGGAATGATGCCTATTCCTGATCTGATACTAAGATTTGAGAACGAGTGTCGAAACGTTTCAGAATCTATCAGGTATGGCTTGAACATAAGGCATCGAGTTGTCGAGGATAAATTAATGAGGCAGAAGGCTCAACTCCTGCTTGATGAGGCGGCAACATGGTCTCTCCTGTGGTTCCTTTATGGGAAAGTGACGGAAGAGCTTTCTAAAGAGCAAATACTGGTGACAGGAACATCACATGTAATGGCCTGTGAGTTTGTTGCAGAGGATCACACAGCTCAATTGTGCCTTAGGATGGTTCAGTGGTTGGAAGGTTTAGCTTCTAAAGCACTTGACTTGGAAGCAAAGGTGCGTGGATCTCATGTTGGTAGTTATCTCCCCAGCAGTGGTGTTTGGCATCATACTCAACGTTACCTGCAAAAAGCAACTTCTGACCGGAACGTTGTTCATCACCTGGACTTTGATGCTCCGACTCGAGAAAATGCAAATGTTTTGCCCGATGATAAAAAACAAGATGAATCTCTTCTAGAGGATGTATGGACTCTTCTAAGGGCTGGAAGGCTAGAAGAGGCGTGTGGACTATGCCGATCTGCTGGACAGCCATGGAGAGCTTCCTCTTTGTCTCCTTTTGGAGGTTTGAGCCTGTTTCCTTCTGCTGAAGCTCTGGTGAAGAATGGTAAAAGTAGGACTTTGCAAGCTGTTGAATTTGAAAGTGGCATTGGTCATCAGTGGCATCTTTGGAAATGGGCTTCCTATTGTGCATCAGAGAAAATAGCAGAGCTAGGTGGAAAATATGAAGCAGCTGTTTATGCTGCCCAATGCAGCAACCTCAAACGGATGCTTCCACTATGCACAGACTGGGAGTCAGCATGCTGGGCAATGGCGAAGTCTTGGCTAGATGTGCAGGTAGACTTGGAAGTCACTCGTTCACTGCCTGGAGGAGTTGATCAACATAGAACTCTTGGAGATGTAATTGACCGAAGTCCTGGGCAAGTTGATACTTCCTTTGATCCTTCAAATGGACCTGAAAATTGGCCAATTCATGTTTTGAATCAACAACCACGACAACTTTCATCTCTTCTGCAAAAACTTCATTCGGGGGAAATGATCCATGAAACTGTTATGCGGCAATGCAAGGAGCAACAGCGACAACTCCAGATGACCTTAATGCTAGGGGACATACCACGTGTACTAGACCTTATATGGTCATGGATAGCACCTTTGGAAGATGATCAGAATGTATTTAGGCCTCACGGAGATCCTCAGATGATTCGATTTGGTGCACATCTAGTCCTTGTGCTTAGATATTTACTCGGCGATGAAATGAAGGGTGCTTTCAAGGAGAAGATTCAGAGCGTTGGTGACCATATTTTACACCTGTATGCCCAATTTCTGTTTTCAAAGGAGCATGAGGAGTTGGTGGGCATATATGCTTCTCAGCTTGCACGTCACCGTTGCATAGACCTCTTTGTTCACATGATGGAACTTAGGCTGCAAAGCAGTGTACATGTCAAATACAAGATATTCCTTTCTGCTATGGAATATTTACCATTTTCTTCGATGGATGAATCTAAGGGTAGTTTTGAAGACATTATTGAAAGGGTTTTGTTGAGATCTCGAGAGATCAAGATTGGCAAATATGATAATCTGTCAGATGTTGCAGAACAGCACAGACTGCAGAGTCTAGAAAAAGCTAAAGTCATCCAGTGGCTTTGCTTCACACCACCCTCAACAATTACTAATGTCAAAGATGTTAGTAAAAAACTTCTTCTTCGAGCATTGGTACATAGCAATGTACTCTTCAGGGAGTTTGCCTTGATTTCTATGTGGAGAATACCCGCTATGCCCATAGGTGCCCACACAGCTCTTGGTTTTCTTGCTGAACCCTTGAAACAACTTGCAGAGACTCTTGAGACCTCCGAGGATCAAAATGTTTTTGAGGATCTAAGGGAGCTCGAAGAATGGCGTGAGTATTACTCCTGTGACGCAACCTACCGCAATTGGCTTAAAACTGAATTAGAGAATGCAGAAGTTTCTGTCTCTGAATTGTCACTAGAGGAAAAGGAAAGGGCTATTTCAGCAGCCAAGGAAACACTAACTGCGTCTCTTTCACTGCTAGAAAGAAGTGAAACGCCGTGGCTGGCTTCTATTGATAATATATATGAATCTGCTGAACCTGTTTTCCTTGAACTTCATGCAACGGCAATGCTCTGCCTGCCATCTGGAGATTGTTTATGTCCAGATGCCACTGTATGCACCACACTGACAAGTGCACTCTACTCTTCTGTTGGTGATGAGATTGTCTCAAATCGACAACTAATGGTGAAAGTTTCTATATCTTCAAAGGACAATTATTGCATTGATATTGTTCTTCGTTGCTTAGCAATAGATGGTGATGGAATTGGACCCCATGATTTCAACGACGGTGGTATTCTTAGCACCATTATGGCTGCTGGTTTTAAAGGTGAGCTTCCTAGGTTTCAAGCTGGAGTTACAATGGAAATATCCCGATTGGATGCTTGGTATTCTGACAAAAATGGCATCTTTGAGTTCCCTGCAACATACATCGTGAAAGGACTTTGTCGCAGGTGCTGTCTCCCTGAAGTCATTCTTCGTTGCATGCAAGTTTATGCTTCTCTCATGGGATCAGGAGTCCTGCCAGATTCCCACGATAATTTGATTGAACTGGTTGGCAGTTCTGAAACCCGCTTTCTGGACTTGTTCAGTCAGCAACAATTACAGGAGTTTTTATTGATGGAGAGGGAATACTCAATCTGCAAAATGGAGCATTCACAGGAATGA 3234 0.4341 MDEEMSMASPFFDPQDLSAREFRRYGKRHLNSGDTVQPDYSASKLSESGLFYDGQNIHSPTNAALILENIKQEVESLDADYLDDKSLYSSRRRLSADVPGIPGMDDGFDSGRYSLKVCKQEGDSLGDDVENIFNLFASLFDSSLTGMMPIPDLILRFENECRNVSESIRYGLNIRHRVVEDKLMRQKAQLLLDEAATWSLLWFLYGKVTEELSKEQILVTGTSHVMACEFVAEDHTAQLCLRMVQWLEGLASKALDLEAKVRGSHVGSYLPSSGVWHHTQRYLQKATSDRNVVHHLDFDAPTRENANVLPDDKKQDESLLEDVWTLLRAGRLEEACGLCRSAGQPWRASSLSPFGGLSLFPSAEALVKNGKSRTLQAVEFESGIGHQWHLWKWASYCASEKIAELGGKYEAAVYAAQCSNLKRMLPLCTDWESACWAMAKSWLDVQVDLEVTRSLPGGVDQHRTLGDVIDRSPGQVDTSFDPSNGPENWPIHVLNQQPRQLSSLLQKLHSGEMIHETVMRQCKEQQRQLQMTLMLGDIPRVLDLIWSWIAPLEDDQNVFRPHGDPQMIRFGAHLVLVLRYLLGDEMKGAFKEKIQSVGDHILHLYAQFLFSKEHEELVGIYASQLARHRCIDLFVHMMELRLQSSVHVKYKIFLSAMEYLPFSSMDESKGSFEDIIERVLLRSREIKIGKYDNLSDVAEQHRLQSLEKAKVIQWLCFTPPSTITNVKDVSKKLLLRALVHSNVLFREFALISMWRIPAMPIGAHTALGFLAEPLKQLAETLETSEDQNVFEDLRELEEWREYYSCDATYRNWLKTELENAEVSVSELSLEEKERAISAAKETLTASLSLLERSETPWLASIDNIYESAEPVFLELHATAMLCLPSGDCLCPDATVCTTLTSALYSSVGDEIVSNRQLMVKVSISSKDNYCIDIVLRCLAIDGDGIGPHDFNDGGILSTIMAAGFKGELPRFQAGVTMEISRLDAWYSDKNGIFEFPATYIVKGLCRRCCLPEVILRCMQVYASLMGSGVLPDSHDNLIELVGSSETRFLDLFSQQQLQEFLLMEREYSICKMEHSQE 1077
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04071 1077 Gene3D - 276 425 - -
Vivi7g04071 1077 PANTHER NUP107-RELATED 16 1075 IPR007252 GO:0005643|GO:0017056
Vivi7g04071 1077 Gene3D - 697 892 - -
Vivi7g04071 1077 Gene3D - 1003 1077 - -
Vivi7g04071 1077 FunFam Nuclear pore complex protein 696 864 - -
Vivi7g04071 1077 Pfam Nuclear pore protein 84 / 107 191 863 IPR007252 GO:0005643|GO:0017056
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04071 Vivi-Chr7 107306052 107324243 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04071 K14301 - gmx:100786552 1857.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g04071 7 107306052 107324243 Vivi7g04071 7 107306052 107324243 ECH