Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04014 ATGATTTTCATTCTTTTCCTCTTAACTCTTCTCTCACATTCCACATCAAATGCTTCAGTACAAGACTTCTGTGTAGCAGATTTATCTTCTCCACAAACCCCTTCAGGCTACCCATGCAAATCATCAGTAACCATCAAAGACTTCGTTTTCTCAAATTTCAATGAAGGAAATTCCACAAACTTTTTCAAATTTTCAGTAACACCAGCATTTGTTAACCAATTTCCAGCAGTTAATGGTCTTGGTATATCCGCGGCAAGGTTAGACCTAGACATCGGTGGCGTTCTCCCAATGCATTCGCATCGGGGCGCTACCGAGTTAATGATTGTGGTTCAAGGTCGTATAACTGCTGGCTTTATTTCTTCTGATAATAAAGTTTTTGTTGCAACACTTTCTAAAGGTGAAGTTTTGGTTTTTCCACAAGGTTTGTTGCATTTTCAGTTCAATGCTGGAAAGAGTAAAGCTTCGGCTTTTCTTACATTTAGTAGCTCAAACCCTGGTTCACAAGTTGTTGATCTTGCTTTGTTTGGGAATAAATTGAGTTCTGCTTTTGTGGAGAAAACTACTTTGCTTGATCATGCTCAAGTTAGAAAGCTTAAAGCTATTTTTGGTGGGAGTGGCTAG 621 0.3881 MIFILFLLTLLSHSTSNASVQDFCVADLSSPQTPSGYPCKSSVTIKDFVFSNFNEGNSTNFFKFSVTPAFVNQFPAVNGLGISAARLDLDIGGVLPMHSHRGATELMIVVQGRITAGFISSDNKVFVATLSKGEVLVFPQGLLHFQFNAGKSKASAFLTFSSSNPGSQVVDLALFGNKLSSAFVEKTTLLDHAQVRKLKAIFGGSG 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04014 206 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 12 199 - -
Vivi7g04014 206 Gene3D Jelly Rolls 16 206 IPR014710 -
Vivi7g04014 206 CDD cupin_OxOx 16 202 IPR001929 GO:0030145
Vivi7g04014 206 PRINTS Germin signature 128 148 IPR001929 GO:0030145
Vivi7g04014 206 PRINTS Germin signature 161 176 IPR001929 GO:0030145
Vivi7g04014 206 PRINTS Germin signature 98 118 IPR001929 GO:0030145
Vivi7g04014 206 SMART Cupin_1_3 51 196 IPR006045 -
Vivi7g04014 206 Pfam Cupin 54 195 IPR006045 -
Vivi7g04014 206 FunFam Auxin-binding protein ABP19a 17 205 - -
Vivi7g04014 206 SUPERFAMILY RmlC-like cupins 20 200 IPR011051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04014 Vivi-Chr7 106320940 106321886 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04014 17 206 Miscellaneous Gene Families AT1G72610 58.549 3.17e-78 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04014 - - egr:104450993 251.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g04014 7 106320940 106321886 Vivi7g04014 7 106320940 106321886 ECH