Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04005 ATGGCGGAAAACGTAATCGGTTCACCACCATTGACTATGGACAACCCCTCTTCTTCAAACCCTACAATTCTATCTCCTTCACAAACCCCCCAACAACAACAACAATCTCCTTCAATTCACATGAATTCGGCTTCACCATCTCTCTCTCAAGATCAACAACAACATTCGCAGTTGCATAACATCAACAACCTCAACCCTAATAACCCTAACCCTAATGTTTCCACTTTTCAACTTCAACAAAACCTACAGCGTTCACCTTCCATGTCCCGCCTTAATCAAATTCAACCTCAGCAGCAGCAGCAGCAACAGCAAATTGCCAGGCAGCAAGCTGGACTTTATGGCGGCCAGATGAATTTCGGTGGATCAGCTGGTGTATCTGCTCAGCAACAACAACTAAGCGGCGGTGTTGGTGTTGGTGTTGGCATAGGTGGGAGTGCTTCCAACTTGTCGCGGTCGGCGTTGATGGGACAGAGTGGTCACTTCCCAATGTTGTCTGGTGCTGGAGCTGCTCAGTTTAATCTGTTAACTTCGCCGAGGCAGAAGAGTGGGTTGGTGCAATCCTCACAATTTTCTTCTGGTAATTCCGGTGGACAATCACTGCAAGGAATGCAACAAGCGATCGGGATGATGGGGTCGTCCAATCTAGCCTCACTGAGGGCTAATGGAGGTCTTTATGCCCAGCAGCAGCAGCAGCTTCGATTGACTCCTAGCCAAATCAGGCAGCAACTCTCACAGCAGGGTTCGCTAAACAATCAACAGGTGCAAGGTTTACCAAGGTCATCATCCCTTGCTTTTATGAATTCTCAGTTGTCCGGATTGTCTCAGAATGGACAGCCTGCCATGATGCATAACTCTTTAACACAGAATCAGTGGCTTAAGCAAATGCCAGCAATGTCTGGCCCTGCCTCCCCGTTGCGTCTTCAACAACATCAGAGGCAGCAGCAGCTGGCTTCATCTGCTCAACTGCAACAAAACTCTATTACCCTAAGCCAACAGCAATTGTCCCAGTTGATGCAGCAGAAATCCATGGGCCAGCCTCAGCTTCATCAACAGCAACAGCAGCATCCATCCTCCCAGCAGCAGCAACAACTTTTACAGCAACAACAACAACAATCTCAACTACAAGCATCTGTTCATCAACAGCAACAGCAGCAGTCTCCGAGAATGCCAGGACCTTCAGGCCAAAAAACACTAAGTTTAACAGGATCACAGCCAGATGCTACTGCATCTGGTACGACTACACCTGGTGGAAGTTCAAGCCAAGGGACTGAAGCAGCAACAAACCAAGTACTTGGAAAGAGAAAGATACAAGATTTAGTTGCACAGGTGGATCCACAGGGTAAGCTGGACCCTTCAGTTATAGATCTTCTTTTAGAGCTTGCTGATGACTTCATTGATACTGCAACTACACATGGTTGCCTTATGGCAAAACATAGAAAATCATCAACTTTGGAGTCCAAGGATTTATTGCTGCATCTAGAGAAAAATTGGGATTTGACAATTCCAGGCTATTCAAGTGAGGAGAAGAAGTGCCAGAATAGACCGGTAAGCACTGAATAG 1560 0.4686 MAENVIGSPPLTMDNPSSSNPTILSPSQTPQQQQQSPSIHMNSASPSLSQDQQQHSQLHNINNLNPNNPNPNVSTFQLQQNLQRSPSMSRLNQIQPQQQQQQQQIARQQAGLYGGQMNFGGSAGVSAQQQQLSGGVGVGVGIGGSASNLSRSALMGQSGHFPMLSGAGAAQFNLLTSPRQKSGLVQSSQFSSGNSGGQSLQGMQQAIGMMGSSNLASLRANGGLYAQQQQQLRLTPSQIRQQLSQQGSLNNQQVQGLPRSSSLAFMNSQLSGLSQNGQPAMMHNSLTQNQWLKQMPAMSGPASPLRLQQHQRQQQLASSAQLQQNSITLSQQQLSQLMQQKSMGQPQLHQQQQQHPSSQQQQQLLQQQQQQSQLQASVHQQQQQQSPRMPGPSGQKTLSLTGSQPDATASGTTTPGGSSSQGTEAATNQVLGKRKIQDLVAQVDPQGKLDPSVIDLLLELADDFIDTATTHGCLMAKHRKSSTLESKDLLLHLEKNWDLTIPGYSSEEKKCQNRPVSTE 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04005 519 MobiDBLite consensus disorder prediction 335 429 - -
Vivi7g04005 519 MobiDBLite consensus disorder prediction 10 107 - -
Vivi7g04005 519 Gene3D Histone, subunit A 426 501 IPR009072 GO:0046982
Vivi7g04005 519 SUPERFAMILY Histone-fold 429 500 IPR009072 GO:0046982
Vivi7g04005 519 MobiDBLite consensus disorder prediction 1 107 - -
Vivi7g04005 519 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 12 17 519 IPR037794 GO:0000124|GO:0005669|GO:0046695
Vivi7g04005 519 FunFam Transcription initiation factor TFIID subunit 12 426 501 - -
Vivi7g04005 519 CDD TAF12 431 499 IPR003228 GO:0005669|GO:0006352
Vivi7g04005 519 MobiDBLite consensus disorder prediction 296 319 - -
Vivi7g04005 519 MobiDBLite consensus disorder prediction 304 319 - -
Vivi7g04005 519 Pfam Transcription initiation factor TFIID subunit A 432 499 IPR003228 GO:0005669|GO:0006352
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04005 Vivi-Chr7 106147943 106153526 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04005 K03126 - mtr:11423979 536.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g04005 7 106147943 106153526 Vivi7g04005 7 106147943 106153526 ECH