Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04001 ATGGGTTCCGGAGGAAGAACGATATTTAGTTTTGACCTTAATGAGCCTCCTACAGAAGATAGTGATGAGAGGGATGGTGTTTTCTGCTTCCAGCCTCAAAAGACCCAGTCGTCAACAAATTCCCATACTTCTAACTTATTTTTAGCTTCTACTGCTGCCCAAGGAACTGACTTATCTGTAGCTTCTACTGCTGCTGCCCAAGGAACTGACTTATCTGTAGCTTCTACTGCTGCCCAAGGAACTGACTTATCTGTAGCTTCTACTGCTGCCCAAGGAACCGACTTATCTGTAGCTTCTACTGCTGCCAAAGGAACCGACTTATCTGTAGCTTCTACTGCTGCCAAAGGAACCGACTTATCTGTAGCTTCTACTGCTGCCAAAGGAACTGACTTATCTGTAGCTTCTACTGTTGCCAAAGGAATAATGAATAATCATGCATTTTCACATGCCTCAACTGTTTCGGGATTCCAACCATTTATTCGCTCTAAGTCTGCAAGTGTGTCTGGTGGGGATGCTGGGCTGATGATAGCAGGATATCAGGGTGCAAAGGCTCCCTCTAAGTCCATAAAAGAGGAGGGCGTGAATGTTATGGAATCTCAGAAATCTGGTTCGGCAAATGCTCAATCTACAGAAAGGGAAGAAGGGGAATGGTCTGAGGAGGAGGGTTATGCTAATGCAAATGGAGGTAATAATCTGCCACGAAAAAGTCAGGCTCCAGAAGAGCAAGCAACATCTGGAATGGTGAATGGAAGTGTTGTGGCTTCTGACAGTAAGTCTAACAATATCAAGAATTCTAATTCTAATAGTATAAATGATGCAAAGTGTAGCCAGGCTTCTATAGGTCTAGAATCAAATAGCAGTGAACAAAAAATCAACGGTGTCCTAAATTCAGCTAGCAATATAAAAAGTGAAGCTTCTATTGATCCACAGGAGGAGCCCAGTATAGTTCCCAAGCAAAAAGAAGTGAAAGGTATTGAAGCAAGTCATGCACTTAGGTCCGCAAATATTCCCGGGAAGAGAAGGATTGACCAACGCAAAGAGGAAATGTTGGGAAAGAAACGTAGTAGGCAGACCATGTTTCTTAACTTGGAAGATGTCAAGCAAGCTGGTCCCATCAAAACCTCAACACCTAGAAGACAGACTTTCTCATCACCAGTTATAAGCCGTACTGTGAAGGAAGTTCGTACTGTTCCTGCACAAGTTGAACGGGTTGGAATAGCTAAGGATCAGAATCAATCAGACTCTTCTTTTGGTGAAGGTGTAAGTCAAATTGAAACACATGAACCTAAATCTGATTGTAATAGTGATAATTCTGGATCATTTGGTAGGCATAGGAGAATCAACAGTGAGACTGAACCTCCTATGGAAGTGAATTTACCACCCATACCAAGACAGGGATCATGGAAACAACAGACAGAGTCGAGGCAACAGAAGAATGCGTTTGGTTCTAATAGGAAGTTGGGACAGAGTGGTCAAAGCTCCAATGATGTCAGGCCGGTAAACAAGAAACATCACTCTATCAAGAAGCAGACCCCTGCCAGTTACCAGTCCCAGGACTCATCTGTTGAACGCCTCATTCGAGAGGTTACCAGTGAAAAGTTTTGGCATCACCCAGGAGAGACCGATTTGAAGTGTGTTCCTGGGAAGTTTGACTCAGTGGAAGAGTATGTTCGAGTATTTGAGCCTTTGCTTTTTGAGGAATGCCGTGCTCAACTTTACAGTACTTGGGAAGAATCAACAGAAACAGTTTCAAGGGATACTCATATTATGGTGCGAGTAAAGGCAAATGAGTCAAGAGAAAGAGGTTGGTATGACGTGAAAGTACTTCCAGTACACGATTTCAAATGGTCATTTAAGGAGGGTGATGTTGCAATTCTTTCGTCCCCCAGGCCTGGATCAGCAGTCAGACCCAAGCAGAACAATTCATCTTCAGCTCACGATGGCGGGGAATCAGAAATCACTGGACGTGTGGTGGGTACAGTTAGACGGCACATACCTATTGATACCCGTGACCCTCCTGGTGCAATACTCCATTACTATGTAGGGGATTCTTATGATCCTAGCAGGGGTGATGATGATCATATCGTAAGGAAACTTCAAACTGGAAGCATCTGGTATCTCACAGTGCTTGGTTCTCTTGCTACCACACAGAGGGAATATATTGCGCTACATGCATTTCGTCGCTTAAATATGCAGATGCAAACTGCAATTCTAAAGCCTAGTCCTGAGCACTTTCCTAAATATGAGCAGCAGACCCCGGCAATGCCTGAATGCTTCACGCCAAACTTCGTTGAGTACCTGCGCAGGACCTTCAATGAACCCCAGTTGGCAGCAATCCAATGGGCAGCTATGCATACAGCTGCCGGTACAAGTAGTGTGGCAACAAAGAGGCAAGATCCTTGGCCTTTTACTCTTGTTCAAGGACCTCCAGGAACAGGAAAGACACATACAGTATGGGGAATGTTGAATGTCATTCACCTTGTGCAGTATCAACACTACTACACCTCATTGCTTAAGCATGTAGCTCCTGAAAGCTACAAGCACGCTAATGAGCTCAATTCAGAGAATGCCCCCACAGGATCTATTGATGAAGTTCTTCAAAATATGGATCAAAATCTGTTAAGAACTTTGCCTAAACTAGTCCCAAAGCCTAGAATGTTAGTTTGTGCTCCTTCTAATGCTGCCACTGATGAGCTTCTTTCCCGTGTTCTTGATCGTGGATTTATTGATGGAGAGATGAAAGTATATCGACCTGATGTTGCTCGGGTTGGGGTTGATTCTCAGACACGTGCTGCCCAAGCAGTTTCTGTTGAGCGGAGAACTGAACAACTTCTGGTCAAGACTCGTGAAGAAGTTTCTGGATGGATGCAACAGTTAAGAAATCGCGAAGCTCAGTATACTCAGCAGTTGCATTGTCTTCATAGAGATCTGAATGCTACTGCTGCTGCTGTACGCTCCCAAGGATCTGTTGGTGTTGACCCTGACCTTCTCATGGCCCGTGATCAGAATCGTGATGTTTTGCTGCAGAACCTTGCATCTGTAGTTGAAGGCAGGGATAAGGTTCTGGTTGAGATGTCTCGCCTTGCTGTTTTGGAAGGTAGGTTTCGACCTGGTAGTGGTTTCAATTTGGAAGAGGCCCGTGCTAGTTTAGAGGCCAGTTTTGCCAATGAAGCTGAAATAGTTTTCACTACAGTATCTAGCAGTGGCCGCAAGTTGTTTTCTCGACTTTCCCATGGATTTGATATGGTAGTCATTGATGAGGCAGCCCAAGCCAGTGAGGTGGGAGTTCTTCCTCCTCTTTCTCTTGGGGCAGCACGGTGTGTTCTTGTTGGAGATCCTCAGCAGCTCCCTGCTACAGTTATCAGCAAGGCTGCTGGAACACTGATGTACAGCAGAAGTCTTTTTGAAAGGTTCCAACAAGCAGGATGCCCTACAATGTTGCTGTCTGTGCAATATAGAATGCATCCCCAAATCCGGGATTTCCCTTCTAGATACTTTTATCAGGGGCGCCTTAGTGACAGTGAGAGTGTGATTAAATTGCCTGAGGAACCATACTATAAAGACCCTTTACTTAGACCTTATATATTCTATGATGTCAGACAAGGACGGGAGTCTCACAGAGGTGGATCAGCCTCCTACCTCAACACAGTTGAAGCACAATATTGTCTCCGACTGTACGAGCATGTTCAGAAAGCAGTGAAGTCTTTTGGTCTGGGGAAGATTTCTGTTGGCATAATTACTCCTTACAAGCTGCAGTTGAAATGCCTCCAACGCGAGTTTGAGGAAGTCTTAAATTCAGAAGAAGGGAAGGATCTATATATCAACACTGTAGATGCTTTCCAAGGTCAAGAGCGTGATGTGATTATTATGTCTTGTGTGCGTGCTGGTCATGGGGTTGGTTTTGTTGCTGATATACGTCGGATGAATGTTGCCCTTACGCGCGCAAGAAGGGCCCTTTGGGTGATGGGAAATGCCAATGCACTGACACATTCCGAGGATTGGAAAGCGTTGATTGCTGATGCAAAATCCCGAAATTGCTACATGGACACGGAATCTCTTCCCAAGGACTTTTTGGTGCCCAAGGGAGCTGTTTACACACCATTACCTGGTAAGGCACCCTTGAATATGAGGGGTATGAGATCAGGTGGGCCAAGATATAATAGATCAATGGAGATGCATATGGAATCCAGAGTGGGAGCACCATTTGAAGATGACGAGAGGATGAATGGCGCTTCAGTAAGCTCCAGAAATGGGAACCACCGTCCACCACGGTATTTACAAGAGAATTCCTTAGATGATTTGAGTGATAAATCCAGAGATGCCTGGCAGCATGGCATACAGAAGAGGCAGGGTTCAACTGGAACCATGGCAAAGAGAGATGTATAG 4386 0.4494 MGSGGRTIFSFDLNEPPTEDSDERDGVFCFQPQKTQSSTNSHTSNLFLASTAAQGTDLSVASTAAAQGTDLSVASTAAQGTDLSVASTAAQGTDLSVASTAAKGTDLSVASTAAKGTDLSVASTAAKGTDLSVASTVAKGIMNNHAFSHASTVSGFQPFIRSKSASVSGGDAGLMIAGYQGAKAPSKSIKEEGVNVMESQKSGSANAQSTEREEGEWSEEEGYANANGGNNLPRKSQAPEEQATSGMVNGSVVASDSKSNNIKNSNSNSINDAKCSQASIGLESNSSEQKINGVLNSASNIKSEASIDPQEEPSIVPKQKEVKGIEASHALRSANIPGKRRIDQRKEEMLGKKRSRQTMFLNLEDVKQAGPIKTSTPRRQTFSSPVISRTVKEVRTVPAQVERVGIAKDQNQSDSSFGEGVSQIETHEPKSDCNSDNSGSFGRHRRINSETEPPMEVNLPPIPRQGSWKQQTESRQQKNAFGSNRKLGQSGQSSNDVRPVNKKHHSIKKQTPASYQSQDSSVERLIREVTSEKFWHHPGETDLKCVPGKFDSVEEYVRVFEPLLFEECRAQLYSTWEESTETVSRDTHIMVRVKANESRERGWYDVKVLPVHDFKWSFKEGDVAILSSPRPGSAVRPKQNNSSSAHDGGESEITGRVVGTVRRHIPIDTRDPPGAILHYYVGDSYDPSRGDDDHIVRKLQTGSIWYLTVLGSLATTQREYIALHAFRRLNMQMQTAILKPSPEHFPKYEQQTPAMPECFTPNFVEYLRRTFNEPQLAAIQWAAMHTAAGTSSVATKRQDPWPFTLVQGPPGTGKTHTVWGMLNVIHLVQYQHYYTSLLKHVAPESYKHANELNSENAPTGSIDEVLQNMDQNLLRTLPKLVPKPRMLVCAPSNAATDELLSRVLDRGFIDGEMKVYRPDVARVGVDSQTRAAQAVSVERRTEQLLVKTREEVSGWMQQLRNREAQYTQQLHCLHRDLNATAAAVRSQGSVGVDPDLLMARDQNRDVLLQNLASVVEGRDKVLVEMSRLAVLEGRFRPGSGFNLEEARASLEASFANEAEIVFTTVSSSGRKLFSRLSHGFDMVVIDEAAQASEVGVLPPLSLGAARCVLVGDPQQLPATVISKAAGTLMYSRSLFERFQQAGCPTMLLSVQYRMHPQIRDFPSRYFYQGRLSDSESVIKLPEEPYYKDPLLRPYIFYDVRQGRESHRGGSASYLNTVEAQYCLRLYEHVQKAVKSFGLGKISVGIITPYKLQLKCLQREFEEVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRAGHGVGFVADIRRMNVALTRARRALWVMGNANALTHSEDWKALIADAKSRNCYMDTESLPKDFLVPKGAVYTPLPGKAPLNMRGMRSGGPRYNRSMEMHMESRVGAPFEDDERMNGASVSSRNGNHRPPRYLQENSLDDLSDKSRDAWQHGIQKRQGSTGTMAKRDV 1461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04001 1461 Pfam AAA domain 1130 1325 IPR041679 -
Vivi7g04001 1461 Gene3D - 705 1151 IPR027417 -
Vivi7g04001 1461 MobiDBLite consensus disorder prediction 229 272 - -
Vivi7g04001 1461 MobiDBLite consensus disorder prediction 193 211 - -
Vivi7g04001 1461 MobiDBLite consensus disorder prediction 405 521 - -
Vivi7g04001 1461 CDD SF1_C_Upf1 1154 1342 IPR047187 -
Vivi7g04001 1461 MobiDBLite consensus disorder prediction 1398 1461 - -
Vivi7g04001 1461 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 770 1352 IPR027417 -
Vivi7g04001 1461 CDD DEXXQc_SETX 771 1153 - -
Vivi7g04001 1461 MobiDBLite consensus disorder prediction 1 26 - -
Vivi7g04001 1461 Gene3D - 1152 1356 IPR027417 -
Vivi7g04001 1461 MobiDBLite consensus disorder prediction 1426 1444 - -
Vivi7g04001 1461 MobiDBLite consensus disorder prediction 464 497 - -
Vivi7g04001 1461 Coils Coil 956 976 - -
Vivi7g04001 1461 MobiDBLite consensus disorder prediction 633 649 - -
Vivi7g04001 1461 MobiDBLite consensus disorder prediction 406 422 - -
Vivi7g04001 1461 MobiDBLite consensus disorder prediction 629 655 - -
Vivi7g04001 1461 Pfam AAA domain 777 1123 IPR041677 GO:0004386
Vivi7g04001 1461 FunFam P-loop containing nucleoside triphosphate hydrolase 1152 1357 - -
Vivi7g04001 1461 PANTHER DNA2/NAM7 HELICASE FAMILY 284 1400 IPR045055 -
Vivi7g04001 1461 MobiDBLite consensus disorder prediction 193 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04001 Vivi-Chr7 106113332 106121344 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04001 - K10706 gmx:100794516 2192.93