Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03977 ATGAGTTTTCTTTTCGGCAGTAGAAAAACTCCCGCCGAGCTTTTGAGGGAAAATAAAAGGATGCTAGATAAGTCTATTCGAGAAATTGAAAGAGAAAGACAAGGCTTGCAGTCTCAAGAAAAGAAATTGATTGCAGAGATTAAGAAGAGTGCCAAACAAGGCCAAATGGGTGCTGTGAGGGTTATGGCGAAAGATCTTATCAGAACTCGTCATCAGATTGACAAGTTCTACAAGCTTAAATCGCAACTTCAGGGTGTTTCTTTGAGAATTCAGACGCTTAAATCTACTCAAGCGATGGGGGAAGCTATGAAAGGAGTGACTAAAGCGATGGGTCAAATGAATAGGCAGATGAATATGCCTTCATTACAGAAGATAATGCAAGAGTTCGAAATGCAGAATGAGAAGATGGAAATGGTTTCTGAGGTGATGGGAGATTCAATTGACGATGCTTTAGAAGGCGATGAAGAAGAGGAAGAGACCGATGATCTTGTGAATCAGGTTCTTGATGAGATTGGAATCGATATCAACTCTGAGCTTGTGAATACACCCGCATCAACCTCAATCGCTGCACCAGCGGCAAAGAACAAGGTTGCTCAGGCTGAACCATCCGGCAATGACGATGGTGGAATAGACGATGATCTACAGGCTAGGTTAGATAACCTGAGAAAAATGTGA 675 0.4222 MSFLFGSRKTPAELLRENKRMLDKSIREIERERQGLQSQEKKLIAEIKKSAKQGQMGAVRVMAKDLIRTRHQIDKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNMPSLQKIMQEFEMQNEKMEMVSEVMGDSIDDALEGDEEEEETDDLVNQVLDEIGIDINSELVNTPASTSIAAPAAKNKVAQAEPSGNDDGGIDDDLQARLDNLRKM 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03977 224 Gene3D - 6 180 - -
Vivi7g03977 224 Coils Coil 211 224 - -
Vivi7g03977 224 MobiDBLite consensus disorder prediction 210 224 - -
Vivi7g03977 224 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 4 222 IPR005024 GO:0007034
Vivi7g03977 224 Coils Coil 12 46 - -
Vivi7g03977 224 MobiDBLite consensus disorder prediction 189 224 - -
Vivi7g03977 224 Pfam Snf7 17 184 IPR005024 GO:0007034
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03977 Vivi-Chr7 105797932 105804961 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03977 K12191 - oeu:111388978 365.925