Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03968 ATGAATTTGCAACAAGTTGGGCAGCCTAAATCTTCTAATGGATATGGTCGTCGGAAATCTGAAAAAGATGGGGCATCCAAATCGGATAATAAGATTCCCCCTGGAAAATCAAATGCTGGCAGATTAGCGAGTACAGGTGCAGTGACAAGTAGTAAAGGTGGTAGTTATGAGAGTCCTTCACGTGATCGACTGGTATATTTAACAACATGCCTTATTGGGCAACAGGTGGAAGTCCAGGTGAAAAATGGATCTATATACTCTGGAATATTTCATGCTACAAATTCTGAGAAGGATTTTGGTATCATCTTGAAAATGGCTTGCTTGACAAAGGATGGGTCTTCGCAAGGGCCGAGCTCCGGTGCGGAATTTGTCAGCAAAGCTCCTTCTAAAACTTTAATTATACCTGGAAAAGAACTTGTACAAGTTATAGCAAAGGATGTTGCTGTTTCTACAGGTGACCTAGCCAGTGAATCTCACTATGATGTGCATCAGGAGATCATGGTTGATTCGGTAATATCTCAACCTCGTCATGTTGATTTGGGGAGAGAATTACACCGATGGGTGCCTGATGAAAATGTTCCACAATGCCCTGAACTTGACAATATCTTTGATGGCTCTTGGAATAGCTCTAGGGGCTGGGATCAGTTTGAAACAAATAAAATGTTGTTTGGAGTAAAAAGCACATTTGACGAGGAACTCTATACTACAAAGCTTGAAAAAGGGCCTCGGATGAGAGAATTAGAGTTGCAAGCACTAAGAATAGCAAGAGAAATTGAGGGCGAGGAAACCCAAGATATTCATCTAGCAGAGGAAAGAGGTCTTTACCCTGATGACTTTGATATTGATGAAGAGACCAGATTCTCTTCCGTATATAGGGGTAAAGGTGTTGACGATGAATATGACGAGAATGAAGACAATTTTTTGGATTCACAAAATTCCGAAACGTTTGGTGATATTTCCGATTCAGTCATTAAGAGACCAGGAAAGGTAAGTGGTGGGAAAGGCAAAAATGGAGCTCAAACATGGTCAAATTTCTCCACTATGTCATCTCAGTCAAAAACTGGTGGAGATGGTTCTTATGATCATGCTAAGCAGTTATCATCTGAAGTCTCTGGTCAAAGTTACTCATTTTCAGATGTGGAAAGCAGGATTCAGGATAACTCTGTTTGTGATCTAATTGGAGCCAATGGTAACACCAAGGAAGAAAATCAGACGCAAGCTGAGGATGTACAGCTGTCAAAATATCAGGATTTGAAACCTGCACCTAACTTGAAGAAAGACGGATCTGATAAAGTGGGATTAACTCCTACTAATGCCTCCTCCTATGCCCCCTCTACTCATATTTCATCAAAGATTGATGAAAAAACTGGATCACATGGAGACTTGACTGGGGGTTCAGAATCTGTCAAAGCAAGTTGGGAAACGAAGTCCTTAAATTCACGAGGAAGATCAGATTTTGCAGCAGGTTCGGCCACGTATTCTGGTCCAAGTTTATCACCAAGTTCTTCACTTGGTTCACTGTCTTCAGACAAATCAACTCTGAATCCCTATGCAAAGGAATTTAAACTGAACCCTAATGCTAAGAGTTTTGTTCCGTCTCAAGCACCTGTTAGGCCTCGCTCTCCAGTGTCTGATGGTTCCTTCTATTACCCAGCTAACGTTTCTACTGTACCGAGTATGCCAACCATGCCAATGGGTGTCGGAGTTGGAACTTCTTTTGCCGGGCCACAGCCTATGATGTATAATCCACAAGTAGCACAAATGCCATCCCAACCATATTTTCATCAGAATGGACCACAGTATGGACAAATTCATGGTCATCCTAGACAAGTTCTATACATGCCCAATTACCTACCCGAGACGCCGCCGCCATATAAGGGACGTAACTATTAA 1893 0.4194 MNLQQVGQPKSSNGYGRRKSEKDGASKSDNKIPPGKSNAGRLASTGAVTSSKGGSYESPSRDRLVYLTTCLIGQQVEVQVKNGSIYSGIFHATNSEKDFGIILKMACLTKDGSSQGPSSGAEFVSKAPSKTLIIPGKELVQVIAKDVAVSTGDLASESHYDVHQEIMVDSVISQPRHVDLGRELHRWVPDENVPQCPELDNIFDGSWNSSRGWDQFETNKMLFGVKSTFDEELYTTKLEKGPRMRELELQALRIAREIEGEETQDIHLAEERGLYPDDFDIDEETRFSSVYRGKGVDDEYDENEDNFLDSQNSETFGDISDSVIKRPGKVSGGKGKNGAQTWSNFSTMSSQSKTGGDGSYDHAKQLSSEVSGQSYSFSDVESRIQDNSVCDLIGANGNTKEENQTQAEDVQLSKYQDLKPAPNLKKDGSDKVGLTPTNASSYAPSTHISSKIDEKTGSHGDLTGGSESVKASWETKSLNSRGRSDFAAGSATYSGPSLSPSSSLGSLSSDKSTLNPYAKEFKLNPNAKSFVPSQAPVRPRSPVSDGSFYYPANVSTVPSMPTMPMGVGVGTSFAGPQPMMYNPQVAQMPSQPYFHQNGPQYGQIHGHPRQVLYMPNYLPETPPPYKGRNY 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03968 630 MobiDBLite consensus disorder prediction 336 358 - -
Vivi7g03968 630 MobiDBLite consensus disorder prediction 307 370 - -
Vivi7g03968 630 Pfam Ataxin 2 SM domain 61 145 IPR025852 -
Vivi7g03968 630 MobiDBLite consensus disorder prediction 1 59 - -
Vivi7g03968 630 Pfam LsmAD domain 223 292 IPR009604 -
Vivi7g03968 630 PANTHER ATAXIN 2-RELATED 34 624 IPR045117 GO:0003723
Vivi7g03968 630 MobiDBLite consensus disorder prediction 15 29 - -
Vivi7g03968 630 Coils Coil 244 264 - -
Vivi7g03968 630 MobiDBLite consensus disorder prediction 395 511 - -
Vivi7g03968 630 MobiDBLite consensus disorder prediction 42 57 - -
Vivi7g03968 630 MobiDBLite consensus disorder prediction 433 451 - -
Vivi7g03968 630 MobiDBLite consensus disorder prediction 461 511 - -
Vivi7g03968 630 SMART LsmAD_2 223 293 IPR009604 -
Vivi7g03968 630 MobiDBLite consensus disorder prediction 395 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03968 Vivi-Chr7 105610971 105617267 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03968 - - gmx:100782491 843.958