Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03945 ATGGCAAAACAAAACCAACAAATCCAAACCCAAGAACCCGGTTCACTTGGGTCCAATTCTCAACCCTTGAGTAACTTCAAATACTCGAACCGGGTTCAATTAAAGTCGCTTTTTCTTAACCGAACCGACGGCGGTGCGGAGTTTATAGGACAGACTGTGGTCGTTGGCGGATGGGTGAAGTCATCGAAGGAAGTTGAGAAATCTTCACCTCCTCCTCCGCCGTCGTCGCCGGCGCCGGAAAATGAAGCGCCGTGCAAAGACGTTTCGTGTGTCGAGATTTTTCAGTCTCGAATTCCTTTGATTCGGAATATTATGGAAGTTTTGGGAGGAAGCAGTTACGTGTCTCGCAAGAAATTACGTGACTCTCCAAATCCTAAAACTCTTCCTCCCAAATCTTCAACCGCTTTTCTTCTTCTCACAGATGGTTCATGCGTTGCCACACTTCAGGTTGTGGTTGAATCCTCGATAGCTACACCGAGCCGGCTTTTGGCTACTGGAACCTGTATATTAGTGGAAGGTCGATTAGAGCGGCCGTCCGCAGAAGGGAAGCATGCTATTCAGTTGAAGGCTGACAAAGTTCTTCACATTGGGACAGTAGACGTTGGGAAGTATCCGTTATCAAAGAAGCGAGTTCCACTGGAGATGTTAAGAGATTACGCTCATTTTCGGCCTCGAACAACTACGGTGGCAACTGTCATGCGAGTTCGCAGTGCTCTGTCGTTTGCAACCCACTCATTTTTCAAGGATCATGCATTTTTTGATGTGCAAGTACCAACTATAACTACTACAGACTCCAAAGGATTTAGCAACATGTTCCAGGTTACGACTACTGGGAATCAGAAAGCAGACAAGGAGAGGTTGAGTACTATTTACGAGAGTGAAGGTATTACCCTTGAAACTGTGAAGGAAGCTGCCAAAGAGAAAAGCAAACTAGTTGAAACTTTAAAAAGAAGTGAAAGCAATAAGGAAGCTCTGGCGGCAGCAATTCAGGATCTGCAGAAAACTATTGAACTGGAATCACAATTGGAAGCAAGAGAAAAGAAAAAATTGGGAACTTTATTGAAGCAAGACAGAGTAGACTCTTCTGAAGATTTTTTCAATACCCAAACTTATTTGACTGTCTCCGGTCGCTTACATCTGGAGAGTTTTGCATCTGCCCTTGGTAATGTGTATTCGTTTGGACCTAGATTTCAAGCAGATAAAACAGATTCTGCAAAACATGCTGCAGAAATGTGGATGGTTGAGGCTGAAATGGCTTTTGCTGAATTACAGGACTCTATCAACTGTGCTTATGACTTGTTTAAGTATCTATGTAAGTGGGTTTTGGAAAATCACTCTGATGATGTGAAGTTTGTTGGCAAAAGAATTGACAACACTTGCATTGATCGTCTTCGGAAAATTATATCAGATTCTCCTCAAATAATTTCCTATAATGAAGCTTTAGATGTTCTTAGAAAGGCCGAAGATAAGAAATCTGAAGCAAAGTTCAATTCGGGTGCTATACTCACTTCAGATCACCTAAGCTATCTGGCTGATGTCGTCTACAAGGGGCCAGTTATAATTCACAGTTATCCAAAAGAAGCTAAGCCATTCTATGTTAGAGTTAATGATGATAAAACTGTTTCTGCATTTGATCTCGTTGTCCCAAAGGTTGGAACTATAATCTCTGGCAGCCAAAATGAGGATCGTCTTACCGTGATAAGCTCCAGAATTACAGAATTGCGTTTGCCAAGAGAGAAGTATGAATGGTACTTGGATCTTTGTCGAAATGGAACGGTCAAGCACGCCGGGTTCACTCTAAACTTTGACCTTATGATCCTCTATATAACAGGCCTTAGCAATGTTAGGGATGTTATCCCTTTTCCAAGAAGCCATGGCAAGGCCAACAACTAA 1893 0.4258 MAKQNQQIQTQEPGSLGSNSQPLSNFKYSNRVQLKSLFLNRTDGGAEFIGQTVVVGGWVKSSKEVEKSSPPPPPSSPAPENEAPCKDVSCVEIFQSRIPLIRNIMEVLGGSSYVSRKKLRDSPNPKTLPPKSSTAFLLLTDGSCVATLQVVVESSIATPSRLLATGTCILVEGRLERPSAEGKHAIQLKADKVLHIGTVDVGKYPLSKKRVPLEMLRDYAHFRPRTTTVATVMRVRSALSFATHSFFKDHAFFDVQVPTITTTDSKGFSNMFQVTTTGNQKADKERLSTIYESEGITLETVKEAAKEKSKLVETLKRSESNKEALAAAIQDLQKTIELESQLEAREKKKLGTLLKQDRVDSSEDFFNTQTYLTVSGRLHLESFASALGNVYSFGPRFQADKTDSAKHAAEMWMVEAEMAFAELQDSINCAYDLFKYLCKWVLENHSDDVKFVGKRIDNTCIDRLRKIISDSPQIISYNEALDVLRKAEDKKSEAKFNSGAILTSDHLSYLADVVYKGPVIIHSYPKEAKPFYVRVNDDKTVSAFDLVVPKVGTIISGSQNEDRLTVISSRITELRLPREKYEWYLDLCRNGTVKHAGFTLNFDLMILYITGLSNVRDVIPFPRSHGKANN 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03945 630 Coils Coil 298 335 - -
Vivi7g03945 630 CDD EcAsnRS_like_N 126 198 - -
Vivi7g03945 630 ProSiteProfiles Aminoacyl-transfer RNA synthetases class-II family profile. 390 620 IPR006195 -
Vivi7g03945 630 Pfam tRNA synthetases class II (D, K and N) 214 280 IPR004364 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Vivi7g03945 630 Gene3D Bira Bifunctional Protein; Domain 2 205 629 IPR045864 -
Vivi7g03945 630 Pfam tRNA synthetases class II (D, K and N) 362 624 IPR004364 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Vivi7g03945 630 MobiDBLite consensus disorder prediction 63 83 - -
Vivi7g03945 630 SUPERFAMILY Class II aaRS and biotin synthetases 192 626 IPR045864 -
Vivi7g03945 630 PANTHER ASPARTYL/LYSYL-TRNA SYNTHETASE 25 625 - -
Vivi7g03945 630 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03945 Vivi-Chr7 105401144 105404613 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03945 K01893 - gmx:100787363 798.505