Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03942 ATGTTCCTCATAGGTATTTATTGGCAGAGACTGGGGACACTTTATTTGCTTCCTTTATTGGAACAAAGCAATACAAGTGCAATCTTTCATGAAGATGTTGCTGAAGAATCAGATGCACATGCAGCAACTGAATCTGATAAGGGAGAAAATCAAAATGGAAAAGAATACATGTGGAATCCTCTAGAATCCAGGTCTAAACAAACGAAGAGTAAATATAAACCTGCTGCCCATAGGGGTTTCATGGCCCGTGCCAAAGGAATACCTGCATTAGAATTATACAAGCTTGCTCAAAAGAAGAAACGCAAGCTTGTTTTGTGTGGCCATTCACTTGGAGGAGCAGTAGCAGCATTAGCTACTCTTGCCATTTTGAGAGTAATGGCTGCTTCATCTTCATCAAAGGAAAATGGGAATGTCTCTATTAAATGTATCACATTTTCTCAACCACCTGTTGGAAATGCTGCTTTGAAGGACTACATTAATAGAAAAGGTTGGCGGCATTATTTCAGAAGTTATTGTATCCCAGAAGATTTGGTCCCCCGTATTTTATCTCCCGCATATTTCAGCCATTATAATGCTCAGTCTGGGCCAGAGCTTTCTGAAAGTGAAAGTAACAGCTTATTATTGAGAAAACAGGAAGAAGGGGTAGAAAAGCCAAAAGTCAATAATGGAGAACAGCTGGTTTTGGGAGTAGGTCCCGTGCAGAGATCCTTCTGGAGACTCTCAAGGCTAGTTCCTTTAGAAGGATTGCGAAGGCAATTTAGTAAGCATCAAGAAAGAAGAATAAGTTCTGTTGAAACAAATTCTTTGCCTGATTCTCTTGCCAATACCTTGATTGAGGATGAAGTGGTTCAACCGCGGTCACTTGAAATACAAGAGGGTTCTGATGGCATATCACTCAAGCCTTTTCCTGAAACAGATAAACATTCATTGGAGGTGTCAACAAATGGGAAAACAAATGCAAAGGCCAATGCCACAAATGGTGATGAAGGAAAATGGCACAAAGTACCTTATTTACCATCATATGTACCATTTGGACAGCTTTATTTATTGGAGAATTCCTCTGTAGAGTCACTATCAGGTGCAGAGTACTCAAAGTTGACATCGGTCAAATCAATGATTGCTGAATTGAGGGAAAGATTTCAATCACATTCAATGAAATCATACCGATCTCGGTTTCAGAGAATCTTTGACTTATGTATGAATGACGATGCGTCATCTTTCTTAGGGATTGAGCAATGGCAACAGGTTTCTCATCTACAACAATGGCTCGGGCTTGCAGCTGCAGACACTGTTGAGCTCGGGCATATAGTAGAGTCTCCTACTATACGTACTGCAACTTCTATTGTTCCTCTAGGATGGAATGGTGTGCCTGGAGCAAAAAATGGAGAACCTCTGAAAGTTGATATTACTGGTTTCGGATTGCATCTCTGTACACTTGTTCACGCTCAAGTGAATGGTGACTGGTGTTCAACTACCGTTGAATCCTTTCCTTCTGCACCAAACTATTCTTCAAATCAAGAAATTCAGCCTGAGTTACAAAAGATGAGAGTATTAATTGGTGCTCCGCAAAGAACGCCTCCAAAACATCAAACAGTGTTGGACTCTTTGATGCCTGCTTTTACCTCTGTTGATTCAAAGACTGCCGGTAGTTCAGCATCTGTTGACAAGGATAAGTGTGTCCGTCCAGAAAGTTTAAATAACTTTTTAATATTTTGCACCAGTGATTTTACAACTGTTTCCAAAGAGGTTCATTTGAGAACTCGTAGAGTACGATTAGTTGGGCTGGAGGGATCGGGTAAAACTACTCTTTTAAAGGCAATCATGAATAAATGTAAACCAAGCACTGCAGCTTATGATGATGCAGTTTCAGATATTGACGTGCAAGAAGTTATTGCTGATGGTTTGTGCTATTGTGACTCTGCCGGAATAAATATGCAGGAACTGAAATCGGAAACCTCTCGCTTCAAGGATGAACTGTGGGCTGGTATTCAAGATCTAAATAGAAAGACAGATTTAATTGTTCTTGTTCATAACTTATCCCATACTATACCTCGATATAGTGATTCAAATGGAACTCAACAGAAGCCAGTCCTGTCACTTTTCTTGGATGAAGCCAAATGTCTTGGAATTCCTTGGGTTATTGCAATAACAAATAAATTTGCAGTTAGTGCTCACCATCAAAAGGCAGCAATTGATGCTGCTTTGAAAGCTTACCAAGTATCTCCTACCTCAGTTGAAGTTATAAACTCCTGCCCATACGTTATGCCTGGTTTTGCTGGGACTTCTTTATCATGGGATGCAACTAATGCAGAATCCAATAATAGGGTGGGTGCTCAAAAGCTTTTATTTGCTCCTATCAATTTTGTTAGGAGGCCTTTTCTGAAAAAGGAGATTGTTCTTCAAGTTGAAGGTGTCTCCGCGCTATGTCAGCAAATCCATCGCATTCTTCGCAGTCACGAAGAGTCTTCGTTTCAGGAACTTGCCAGAGATAGACTAATGATGGAGTTAGCGAGAGAGCAAAGAATATCAAATGATGGAAGTAAAAATGGTGTAGGCAAGGCAATTTCATTGAATTCTGCTGCCGTAGGCGCATCCCTTGGGGCTGGTCTTGGGTTTGTCCTGGCGATTGTAATGGGGGCAGCGTCAGCGCTGAGGAAGCCCTGA 2664 0.4095 MFLIGIYWQRLGTLYLLPLLEQSNTSAIFHEDVAEESDAHAATESDKGENQNGKEYMWNPLESRSKQTKSKYKPAAHRGFMARAKGIPALELYKLAQKKKRKLVLCGHSLGGAVAALATLAILRVMAASSSSKENGNVSIKCITFSQPPVGNAALKDYINRKGWRHYFRSYCIPEDLVPRILSPAYFSHYNAQSGPELSESESNSLLLRKQEEGVEKPKVNNGEQLVLGVGPVQRSFWRLSRLVPLEGLRRQFSKHQERRISSVETNSLPDSLANTLIEDEVVQPRSLEIQEGSDGISLKPFPETDKHSLEVSTNGKTNAKANATNGDEGKWHKVPYLPSYVPFGQLYLLENSSVESLSGAEYSKLTSVKSMIAELRERFQSHSMKSYRSRFQRIFDLCMNDDASSFLGIEQWQQVSHLQQWLGLAAADTVELGHIVESPTIRTATSIVPLGWNGVPGAKNGEPLKVDITGFGLHLCTLVHAQVNGDWCSTTVESFPSAPNYSSNQEIQPELQKMRVLIGAPQRTPPKHQTVLDSLMPAFTSVDSKTAGSSASVDKDKCVRPESLNNFLIFCTSDFTTVSKEVHLRTRRVRLVGLEGSGKTTLLKAIMNKCKPSTAAYDDAVSDIDVQEVIADGLCYCDSAGINMQELKSETSRFKDELWAGIQDLNRKTDLIVLVHNLSHTIPRYSDSNGTQQKPVLSLFLDEAKCLGIPWVIAITNKFAVSAHHQKAAIDAALKAYQVSPTSVEVINSCPYVMPGFAGTSLSWDATNAESNNRVGAQKLLFAPINFVRRPFLKKEIVLQVEGVSALCQQIHRILRSHEESSFQELARDRLMMELAREQRISNDGSKNGVGKAISLNSAAVGASLGAGLGFVLAIVMGAASALRKP 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03942 887 Gene3D alpha/beta hydrolase 39 236 IPR029058 -
Vivi7g03942 887 SUPERFAMILY alpha/beta-Hydrolases 76 190 IPR029058 -
Vivi7g03942 887 MobiDBLite consensus disorder prediction 39 69 - -
Vivi7g03942 887 Pfam 50S ribosome-binding GTPase 590 688 IPR006073 GO:0005525
Vivi7g03942 887 MobiDBLite consensus disorder prediction 294 313 - -
Vivi7g03942 887 Gene3D - 589 748 IPR027417 -
Vivi7g03942 887 Pfam Lipase (class 3) 73 181 IPR002921 GO:0006629
Vivi7g03942 887 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 586 720 IPR027417 -
Vivi7g03942 887 PANTHER F21O3.11 PROTEIN 26 887 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03942 Vivi-Chr7 105378224 105388178 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03942 28 887 Acyl Lipid Metabolism Gene Families AT3G07400 58.716 0.0 1004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03942 - - gmx:100797051 1362.82