Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03878 ATGGGATCAAAGAGAGATTCTCCTGTGAATGTTTTGTCTCAATGGTTGAGGAAGAGATCAATGAAAGTGAAGATCTTTTTAGGGACATTGCTTGCTTTTTGTGCTTTGGTGGTTTTGAAGTTTACTATCAAAGATTCAGATTTTTTCTTCAAAGCTTCTGAAACTATTCATATTGTTGGCCTTATTGTTCTCATTTACAAGCTCTTTGCTCACAAGACTTGCTCTGGTTTATCCCTCAAGAGTCAAGAGCTCACAGCATTATTCCTAACAACAAGATTAGGTTGCAGTATCTATATGGAGTCAAACATTCACACTGTGCTGGATCTGATATTTCTTTTATCAACTTTACTTGTTATCTGGTTGATAAGATACAGGCTGAAGTCATCTTATATGAAGGAGTTTGACAACATGTGGTTATCCTTTCTGGTGGTGCCTTCTACAATTTTGGCGATATTAATTCATCCAAATACAAAGCATATCTGGATAGCTCGAGTCCTTTGGGCGTTCACCGTGTATTTGGAAACTATTTCAATTCTTCCTCAACTTCGTTATATGCAGAAAGCAAAGATGATTGAAACATTCACGGGATATTATATATTTGCACTTGGTGTCTCAAGATTCTTTGCACTAGCGTATTGGATTATTCATACCTATGATACTCGAGGGAAATATCTATATTTGATCGGCCATGGCTATATCTGGATGTTGGCAGCTCTTATATCAGAGATGATTCAGTCTTTCATCTTGGCAGACTTTTGCTACTATTATACGAAGAGCTTCATGCAAGGGCAGCTTTTGAGGAAAATGCCAGTTTAA 816 0.3713 MGSKRDSPVNVLSQWLRKRSMKVKIFLGTLLAFCALVVLKFTIKDSDFFFKASETIHIVGLIVLIYKLFAHKTCSGLSLKSQELTALFLTTRLGCSIYMESNIHTVLDLIFLLSTLLVIWLIRYRLKSSYMKEFDNMWLSFLVVPSTILAILIHPNTKHIWIARVLWAFTVYLETISILPQLRYMQKAKMIETFTGYYIFALGVSRFFALAYWIIHTYDTRGKYLYLIGHGYIWMLAALISEMIQSFILADFCYYYTKSFMQGQLLRKMPV 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03878 271 Pfam ER lumen protein retaining receptor 73 215 IPR000133 GO:0006621|GO:0016020|GO:0046923
Vivi7g03878 271 PANTHER ER LUMEN PROTEIN RETAINING RECEPTOR 48 259 IPR000133 GO:0006621|GO:0016020|GO:0046923
Vivi7g03878 271 PRINTS ER lumen protein retaining receptor signature 189 203 IPR000133 GO:0006621|GO:0016020|GO:0046923
Vivi7g03878 271 PRINTS ER lumen protein retaining receptor signature 167 187 IPR000133 GO:0006621|GO:0016020|GO:0046923
Vivi7g03878 271 PRINTS ER lumen protein retaining receptor signature 49 68 IPR000133 GO:0006621|GO:0016020|GO:0046923
Vivi7g03878 271 PRINTS ER lumen protein retaining receptor signature 76 96 IPR000133 GO:0006621|GO:0016020|GO:0046923
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03878 Vivi-Chr7 104847680 104852879 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03878 1 271 Miscellaneous Gene Families AT3G25160 56.985 6.31e-113 324
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03878 - K10949 gmx:100790733 380.563