Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03824 ATGAGTGAGCAGAAAACAGCTTCTATAGAAAGCAGTGGCACACTCACTATGAGTGGCCCCCTCGTCGGAGCCACCGAGAAAACCATCCGGCGCCGGAGAACCGAGGCGATGCAGCTGATTCTTCGAGCTGTATGCATGGCAACCTGTGTTGTTTCATTGTCATTGATGATCACAGCCGAACAAAACAGCTCCGTTTCTATCTATGGATTTCGTTTACCTGTTCATTCCAAATGGTCTTTTTCTCCATCTTACGAATTTATTGTTGGGGTTTCTGTAGCTGTTGCAGCTCACTCCCTACTGCAACTACTCATTGGCACATCAAGGTTTCTTAGGACTTCTTCTGTGATTCCTTCAAGAAACCACGCATGGGTTCTTTTTGCTGGTGATCAGGCTTTTGCTTATGCATTGATGAGTGCTGGATCTGCTGCATCTGGAGTAACCAATCTGAATCGGACAGGAATTAGACACACACCTCTTCCAAATTTGTGCAAACCTTTGCACAAATTTTGTGACCATGTTGCCATCTCAATAGCTTTCACTTTCATCAGCTGTTTCTTGCTTGCCACATCTGCTGTCCATGATGTAATCTGGCTCACTCAACACTGA 606 0.4538 MSEQKTASIESSGTLTMSGPLVGATEKTIRRRRTEAMQLILRAVCMATCVVSLSLMITAEQNSSVSIYGFRLPVHSKWSFSPSYEFIVGVSVAVAAHSLLQLLIGTSRFLRTSSVIPSRNHAWVLFAGDQAFAYALMSAGSAASGVTNLNRTGIRHTPLPNLCKPLHKFCDHVAISIAFTFISCFLLATSAVHDVIWLTQH 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03824 201 NCBIfam plant integral membrane protein TIGR01569 39 190 IPR006459 -
Vivi7g03824 201 PANTHER CASP-LIKE PROTEIN 4A4 29 198 - -
Vivi7g03824 201 Pfam Casparian strip membrane protein domain 32 186 IPR006702 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03824 26 199 Miscellaneous Gene Families AT1G79780 47.458 1.63e-52 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03824 - - pvu:PHAVU_010G146500g 320.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g03824 7 104204681 104207105 Vivi7g03824 7 104204681 104207105 ECH