Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03796 ATGGGGAGTTCTGAAGGGATGGGTGCATCGTCAAAGCCTGCGAACGCTCCGTCGCAGGCGGCGGCGCCGCCGGAGAAACAATATGGTGTCACAAAGCCGATTTCAATGGCTGGGCCAAGCGTGGCTGATTTGAAACGCACTCAGAAATTGGAGAAGTTTCTGGCTGATTCTGGACTATATGAGGGTAAAGAGGAGGCTTCCAAGAGAGTTGAGGTCCTTCAGCGGCTTGAAGAGATTGTAAAAAATTGGGTTAAGCAGCTAACTCGTCTGAAGGGGTACACTGATCAAATGGTCCAAGATGCAAATGCTCTCATAGTCACTTTTGGTTCTTATCGGCTTGGCGTTCATGGTCCTGGTGCTGACTTAGATACACTTTGTATTGGGCCATCCTATGTGAACCGAGAGCATGATTTTTTCTACACATTGCATGAGATCCTAGCTGCTGTGGATGAAGTTACTGAACTACAACCAATTCCGGATGCCCATGTTCCAGTTATGAGGTTCAAGTTTGATGGAATATCGATCGACCTTCTTTATGCTAGTATTTCTCGTTTGGTTGTACCTGAAGAATTGGACATATCTGATGTCTCTGTTCTACACAATGTTGACGAGCCTACAGTTCGAAGTTTGAATGGTTGTAGGGTTGCAGATCAAATTCTAAAGCTTGTTCCAAATGTTGAGTACTTTCGAACAACACTTCGCTGCTTGAAGTATTGGGCCAAAAGACGAGGTCTTTATTCCAATGTAACTGGTTTTCTTGGTGGTGTGAACTGGGCACTTCTTGTAGCCCGAGTGTGCCAGATGTATCCAAATGCTGTTCCGAGCATGCTTGTCTCCCGGTTCTTTAGGGTATATACACAGTGGAGGTGGCCAAATCCTGTTATGTTATGTCCAATAGAAGAGAACGAGCTTGGGTTTTCATTGTGGCACCCTCGCAAAAATCCTCGTGATCGAACCCATCTTATGCCAATCATCACTCCTGCCTATCCATGCATGAATTCAAGTTATAATGTTTCTACAAGCACCCTTCGGGTTATGATGGAGCAGTTCCAACATGGCAACAAAATCTGTGGGGATATAGATATGAATAAAAGCTGCTGGAGGGCTCTGTTTGAACCATACCTTTTCTTTGAAGGCTACAAAAACTTCTTGCAAATTGACATAGTTGCTGCTGATGTTGATGACTTGCGGAATTGGAAGGGTTGGGTGGAATCACGCCTTCGACAGCTGACTTTGATGATTGAACGTGATACTTTTGGGAAGTTGCAGTGTCATCCATATCCTCGGGAGTATATTGATCCTTCAAAGAAATGTTTACATAATGCTTTCTTCATGGGTCTTCAGAGGAAAGAGGGAGAAGTTGTTCAAGAAGGCTGTCAGTTCGATATACGTGCGAGTGTTGAAGAATTTCGGCATTCTGTTAATAGCTACATGTTCTGGAAACCTGGAATGGATATTCATGTTTCGCACATCCGTAGAAGGCAAATCCCATGTTATGTGTTTCCCAATGGTTTAAAACGATCTCGACCATCAAGGTCAACAGCACAACTGAAGAAGTCTCCTACATCATTTCATGGAAATGAGTTATCTCCGACTGAACAGGGTGAGAAGAACTTTAAGAGGAAGCATGATGACAGAGGGATGGGGCAGAATGTTGTACTGAAAAAGCATTGTGTTAGTCCTCCTGTGGATAGCTTGACCGGAGGCAATCCATGCCTCCATGCTGGTGACATGCCCGTTCATGCCGTAACTGATTGTCTAGAGTTGAAAAATGTTACGAGTATGAGTTTGTCCAATTGTGAGCAAGATCAGTTTGATAACCGAATGTCTCCAGAATCTGGGACTGAATCTGCATCAAATTCAAGTGGAGTTACATCTGTTTCAAGTAATGGTGGTTCTTCTCCTGAAGATGTTGGGTCTGCACCGCCGGGAGCTTTTGTTGAGGATAGTGCCATGGCTGTTGAGGCAACAATCAGTGGTAGATTTGAAGATACGACGATTTACATGGAAGATTCTGTTAAACTTGGAAACAATACACTGGCGGGTAGAAATAATGACGTATTACAAAATGAGCTAAAGGCACAGTTGGAGCCAATTGCAATGTCAGGGATGTTTCTTGATGCCAAGGGAACCTTTGACAAAGATACTGTGCAAAATACAGTGATAAGGAGACTGAGTTTAACATCGACAGCGTAA 2196 0.439 MGSSEGMGASSKPANAPSQAAAPPEKQYGVTKPISMAGPSVADLKRTQKLEKFLADSGLYEGKEEASKRVEVLQRLEEIVKNWVKQLTRLKGYTDQMVQDANALIVTFGSYRLGVHGPGADLDTLCIGPSYVNREHDFFYTLHEILAAVDEVTELQPIPDAHVPVMRFKFDGISIDLLYASISRLVVPEELDISDVSVLHNVDEPTVRSLNGCRVADQILKLVPNVEYFRTTLRCLKYWAKRRGLYSNVTGFLGGVNWALLVARVCQMYPNAVPSMLVSRFFRVYTQWRWPNPVMLCPIEENELGFSLWHPRKNPRDRTHLMPIITPAYPCMNSSYNVSTSTLRVMMEQFQHGNKICGDIDMNKSCWRALFEPYLFFEGYKNFLQIDIVAADVDDLRNWKGWVESRLRQLTLMIERDTFGKLQCHPYPREYIDPSKKCLHNAFFMGLQRKEGEVVQEGCQFDIRASVEEFRHSVNSYMFWKPGMDIHVSHIRRRQIPCYVFPNGLKRSRPSRSTAQLKKSPTSFHGNELSPTEQGEKNFKRKHDDRGMGQNVVLKKHCVSPPVDSLTGGNPCLHAGDMPVHAVTDCLELKNVTSMSLSNCEQDQFDNRMSPESGTESASNSSGVTSVSSNGGSSPEDVGSAPPGAFVEDSAMAVEATISGRFEDTTIYMEDSVKLGNNTLAGRNNDVLQNELKAQLEPIAMSGMFLDAKGTFDKDTVQNTVIRRLSLTSTA 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03796 731 MobiDBLite consensus disorder prediction 1 17 - -
Vivi7g03796 731 Pfam Poly(A) polymerase predicted RNA binding domain 376 433 IPR007010 GO:0003723|GO:0043631
Vivi7g03796 731 MobiDBLite consensus disorder prediction 604 645 - -
Vivi7g03796 731 SUPERFAMILY PAP/OAS1 substrate-binding domain 224 373 - -
Vivi7g03796 731 Gene3D - 29 371 - -
Vivi7g03796 731 MobiDBLite consensus disorder prediction 1 34 - -
Vivi7g03796 731 Pfam Nucleotidyltransferase domain 97 156 IPR002934 GO:0016779
Vivi7g03796 731 FunFam Poly(A) polymerase alpha, putative 61 217 - -
Vivi7g03796 731 Gene3D Poly(A) polymerase predicted RNA binding domain 376 491 - -
Vivi7g03796 731 SUPERFAMILY Nucleotidyltransferase 26 222 IPR043519 -
Vivi7g03796 731 MobiDBLite consensus disorder prediction 507 533 - -
Vivi7g03796 731 Pfam Poly(A) polymerase central domain 29 373 IPR007012 GO:0043631|GO:1990817
Vivi7g03796 731 FunFam Putative poly(A) polymerase gamma 193 371 - -
Vivi7g03796 731 PANTHER POLY A POLYMERASE 13 538 - -
Vivi7g03796 731 Gene3D Beta Polymerase, domain 2 61 217 IPR043519 -
Vivi7g03796 731 MobiDBLite consensus disorder prediction 604 636 - -
Vivi7g03796 731 CDD NT_PAP_TUTase 68 223 - -
Vivi7g03796 731 SUPERFAMILY PAP/Archaeal CCA-adding enzyme, C-terminal domain 376 502 IPR011068 GO:0003723|GO:0016779|GO:0031123
Vivi7g03796 731 FunFam Nuclear poly(A) polymerase 4 375 491 - -
Vivi7g03796 731 MobiDBLite consensus disorder prediction 507 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03796 Vivi-Chr7 103865365 103870736 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03796 K14376 - gmx:100783237 998.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g03796 7 103865365 103870736 Vivi7g03796 7 103865365 103870736 ECH