Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03756 ATGTTTTCTTCTTCCTTCAAATTCAAGACTTTCCATTTTTGTATCATCATATTCATCTTACATGTCTTTGCTGCAGCACCCATTTTGTCAGATAATTCCTCAATCAACAACTTTCTAGAGATTGCCAAGAGTCCTGAGCTTTTTGATTGGATGGTCAGTATCAGAAGGAAGATTCATGAGTATCCTGAACTTGGTTATGAAGAATTTGACACAAGTAAACTGATAAGATCAGAATTGGATAAAATGGGTATACCTTATAAACATCCAGTTGCAATCACTGGTGTCATTGGCTTCATAGGAACTGGATTGCCTCCTTTTGTTGCTTTAAGAGCTGACATGGATGCTCTTCCCATGCAGGAAATGGTGGAGTGGGAGCATAAGAGTAAGATAGATGGAAAGATGCATTCTTGTGGCCATGATGCTCATGTTGCCATGGTACTTGGTGCTGCAAAGATTCTTAAAAAGCATGAGAAAGAGATTCAAGGAACTGTTGTTCTTGTTTTCCAACCAGCAGAGGAAGTTGGTGGAGGGGCTAAGAGAATTGTAGAATCTGGAGTGTTAGAAAATGTTAGTGCTATCTTTGGATTGCATATTGCTCCTGAAGTACCAATAGGTGTAGTGGCCTCTAGGCCTGGTCCAATATTGGCAGGAAGTGGCTTCTTTGAAGCAAAAATAAGTGGAAAGGGAGGTCATGCTGCTATCCCTCAACAGGCTATAGACCCTGTATTGGCAGCTTCTAATGTGATTATTAGCTTACAATACCTTGTTTCTCGCGAGGCCGATCCTCTTGACTCCCAGGTTGTGACTATTGCGAAGTTCCAAGGAGGTAGTGCTTTCAATGTTATTCCAGATTATGTCACAATTGGTGGCACCTTCCGAGCCTTTTCTCAACAAAGCTTCAACCAACTGAGACTGCGGATTGAGGAGGTTATTATTGGGCAAGCTGCTGTGCATAGGTGCAATGCAACTGTGGACTTCCTTGATGGAGTGAATCCTTTCTATCCTCCAACTGTAAACGATGCCGATTTGCACGAACATTTTGTGAATGTTGCAGTGAATATGCTTGGAATTGATAAAGTTATCAGTGACATGACCCCGGTCATGGGATCTGAAGACTTTTCATTCTATCAAGAGGCCATGCCTGGTTACTTCTTCATCCTTGGAGTGAGGAATTCCGAACATAAGGCGTCGTCATTTTTACACTCGCCTTATCTCGAAATCAATGAAGATGGACTTCCTTATGGAGCTGCACTTCATGCATCATTGGCTTCTAGTTATCTTGTAGAACATCAGCAGGATGTTGAGAGAAAATATCATGATGAATTATAA 1329 0.4153 MFSSSFKFKTFHFCIIIFILHVFAAAPILSDNSSINNFLEIAKSPELFDWMVSIRRKIHEYPELGYEEFDTSKLIRSELDKMGIPYKHPVAITGVIGFIGTGLPPFVALRADMDALPMQEMVEWEHKSKIDGKMHSCGHDAHVAMVLGAAKILKKHEKEIQGTVVLVFQPAEEVGGGAKRIVESGVLENVSAIFGLHIAPEVPIGVVASRPGPILAGSGFFEAKISGKGGHAAIPQQAIDPVLAASNVIISLQYLVSREADPLDSQVVTIAKFQGGSAFNVIPDYVTIGGTFRAFSQQSFNQLRLRIEEVIIGQAAVHRCNATVDFLDGVNPFYPPTVNDADLHEHFVNVAVNMLGIDKVISDMTPVMGSEDFSFYQEAMPGYFFILGVRNSEHKASSFLHSPYLEINEDGLPYGAALHASLASSYLVEHQQDVERKYHDEL 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03756 442 PANTHER PEPTIDASE M20 FAMILY MEMBER 30 435 IPR017439 GO:0016787
Vivi7g03756 442 NCBIfam amidohydrolase 51 414 IPR017439 GO:0016787
Vivi7g03756 442 CDD M20_IAA_Hyd 51 427 IPR044757 GO:0009850|GO:0016787
Vivi7g03756 442 Pfam Peptidase dimerisation domain 217 311 IPR011650 -
Vivi7g03756 442 Pfam Peptidase family M20/M25/M40 108 423 IPR002933 GO:0016787
Vivi7g03756 442 Gene3D Zn peptidases 51 411 - -
Vivi7g03756 442 Gene3D - 216 334 - -
Vivi7g03756 442 SUPERFAMILY Bacterial exopeptidase dimerisation domain 216 335 IPR036264 -
Vivi7g03756 442 SUPERFAMILY Zn-dependent exopeptidases 45 429 - -
Vivi7g03756 442 PIRSF Amidohydrol_AmhX 37 431 IPR017439 GO:0016787
Vivi7g03756 442 FunFam N-acetyldiaminopimelate deacetylase 216 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03756 Vivi-Chr7 103499098 103500900 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03756 K21604 - gmx:100789077 644.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g03756 7 103499098 103500900 Vivi7g03756 7 103499098 103500900 ECH