Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03754 ATGTCTTCTTTCTTCAAATTCAAATTCAACAACTTTCTGGACATTGCCAAGAGTCCTGAGGTTTTTGATTGGATGGTCAGTATCAGAAGGAAGATTCATGAGAATCCTGAACTGGGTTTTGAAGAATTTGAAACAAGTGAACTGATAAGATCAGAATTGGATAAAATGGATATACCTTATAAACATCCGGTTGCAATCACTGGTGTTATTGGCTTGATAGGGACTGGTTTGCCTCCTTTTGTTGCTATAAGAGCTGATATGGATGCTCTTCCTATGCAGGAAATGGTGGAGTGGGAGCACAAGAGTAAAGTAGCTGGAAAGATGCATGCATGTGGTCATGATGCTCATGTTACCATGTTACTTGGTGCTGCAAAGATTCTCAAACACCATGAAAAAGAAATACAAGGAACAGTTGTTCTTGTTTTCCAACCAGCAGAGGAAGGAAGTGGAGGAGCTAAAAAAATTCTTGAATCTGGAGTATTACAAAATGTTACAGCTATATTTGGATTGCACGTTGTTCCTGAACTGCCAGTAGGAGAAGTGGGCTGTAAGTCTGGTCCAATATTAGCAGGAAGTGGCCGTTTTGAAGCAAAAATAAGTGGAAAAGGAGGTCATGCTGCTGTTCCTCAAAACGCTATAGATCCCATATTGGCAGCTTCCAATGTGATCATTAGCCTACAGTACCTTGTTTCTCGGGAAGCTGATCCTTTTGACTCACAGGTTGTGACTGTTGCAAAGTTCCAAGGAGGTAGTACATTCAATGTTATTCCAGATTATGTCACAATCGGTGGAACCTACCGAGCTTTTTCTAAACAAAGCTTCAGCCATCTGAGACGGAGGATTGAAGAGATTATTGTCGGACAAGCTGCTGTGCATAGATGCAAAGCAACCGTGGATTTTCTTGATGAAGAGAAACCTAGCTATCCTCCAACCGTAAACGATAGTAACTTGCATGAGCATTTTGTGAATGTTGCAGTGAATATGCTTGGTACCAATAAAGTTAATAGTACCGTGACACCATCCATGGGAGCTGAAGATTTTTCTTTCTATCAAGAGGTCATGCCTGGTTACTTCTTCATGCTTGGAGTGCAGAATGCCTCACATAAGCCGTCTGAATCATCATTACACTCACCTTATCTCGAAATCAACGAAGATGGATTTCCTTATGGAGCTGCACTTCATGCATCATTAGCTTCTAGTTATCTTCTAAAACATCAGCAAAATATGCCTGGTGCTGCTGATACCAAATATCATGATGAAGTATAA 1266 0.4068 MSSFFKFKFNNFLDIAKSPEVFDWMVSIRRKIHENPELGFEEFETSELIRSELDKMDIPYKHPVAITGVIGLIGTGLPPFVAIRADMDALPMQEMVEWEHKSKVAGKMHACGHDAHVTMLLGAAKILKHHEKEIQGTVVLVFQPAEEGSGGAKKILESGVLQNVTAIFGLHVVPELPVGEVGCKSGPILAGSGRFEAKISGKGGHAAVPQNAIDPILAASNVIISLQYLVSREADPFDSQVVTVAKFQGGSTFNVIPDYVTIGGTYRAFSKQSFSHLRRRIEEIIVGQAAVHRCKATVDFLDEEKPSYPPTVNDSNLHEHFVNVAVNMLGTNKVNSTVTPSMGAEDFSFYQEVMPGYFFMLGVQNASHKPSESSLHSPYLEINEDGFPYGAALHASLASSYLLKHQQNMPGAADTKYHDEV 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03754 421 Gene3D - 190 308 - -
Vivi7g03754 421 NCBIfam amidohydrolase 25 388 IPR017439 GO:0016787
Vivi7g03754 421 Gene3D Zn peptidases 25 385 - -
Vivi7g03754 421 Pfam Peptidase dimerisation domain 191 286 IPR011650 -
Vivi7g03754 421 CDD M20_IAA_Hyd 25 402 IPR044757 GO:0009850|GO:0016787
Vivi7g03754 421 PANTHER PEPTIDASE M20 FAMILY MEMBER 10 409 IPR017439 GO:0016787
Vivi7g03754 421 FunFam N-acetyldiaminopimelate deacetylase 190 308 - -
Vivi7g03754 421 SUPERFAMILY Bacterial exopeptidase dimerisation domain 191 300 IPR036264 -
Vivi7g03754 421 Pfam Peptidase family M20/M25/M40 82 396 IPR002933 GO:0016787
Vivi7g03754 421 SUPERFAMILY Zn-dependent exopeptidases 20 404 - -
Vivi7g03754 421 PIRSF Amidohydrol_AmhX 12 406 IPR017439 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03754 Vivi-Chr7 103482438 103485116 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03754 K21604 - gmx:100789077 620.928