Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03703 ATGGCTACTAATGATACTTGTTGTTCAACTCAACTAATTGATGGAGATGGTGTATTCAATGCTACTGGGATTGACAAGTTTATGAAGGAGGTGAAATTGGCGGAATGTGGGCTTTCATATGCTGTAGTTTCTATTATGGGGCCACAGAGTAGTGGCAAGAGCACACTATTGAATAATTTGTTTAATACCAATTTCAGAGAGATGGATGCTTTTAAGGGAAGGTCTCAAACAACCAAAGGAATCTGGATGGCTAGATGTGCTGGCATAGAGCCTTGTACGCTTGTGATGGATTTGGAGGGCACAGATGGAAGAGAACGTGGAGAGGATGATACTGCATTCGAAAAGCAGAGTGCTCTGTTTGCTCTCGCTGTCTCAGATATTGTGTTAATAAACATGTGGTGCCATGACATTGGCCGTGAGCAAGCTGCAAATAAGCCTCTTTTGAAAACCGTCTTTCAGGTTATGATGAGATTGTTTAGTCCGCGCAAAACAACAATGCTGTTTGTCATACGTGATAAAACAAGGACACCGCTTGAAAATTTAGAACCTGTTTTGCGAGAAGATATTCAGAAGATATGGGACTCTGTTCCTAAACCACAGGCCCACCTAGAAACCCCATTAAGCGAATTTTTCAACGTTGAAGTTGTTGCACTTTCTAGTTATGAAGAAAAGGAAGAGCAATTTAGAGAGCAGGTTGCCAATTTGAGGCAACGCTTTCATCAGTCTATTGCTCCTGGTGGCCTAGCAGGGGACCGACGTGGAGCAGTTCCTGCTTCTGGATTTTCTTTTAGCTCTCAGCAAATATGGAAAGTCATTAAGGAAAACAAAGATCTCGACCTTCCTGCACACAAGGTTATGGTTGCAACTGTACGTTGTGAAGAAATTGCCAATGAGAAATATGCCGCTTTTGTTGCAAATGAGGAATGGTGTCAATTGGAAGAGACTGTGCAATCTAATCCTATTCCTGGATTTGGGAAAAAGATCAACTCTCTCCTTCATGCTGGTTTGTCAGAGTATGACGCCGAGGCTACTTATTTTGATGAAGGCGTGAGAACTGCAAAACAAAAGCAACTTCAAGATAAATTGTTGCAACTTGTCCAACCAGCGTACCAATCTGCACTGGGACATATTAGATCTGGAACTTTGGAAAAATTTAAGGATTCACTCGAAAAGGCTTTGAAAGGAGGGGAAAGGTTTTCTGCAGCTGCTAATAGTTGCATTGGGTCTTGTGTGGCTCAATTTGATGAAGCATGTGCAGATGTTGTTATTGAAGTAGCAAATTGGGATACATCTAAAGTACGAGAGAAACTGTTGCGTGATATTGATGCACACGTTGCATCCGTGCGTGAAGCTAAGATTTCTGAACTTGTTTCTTCATATGAGGAAAAACTGAAACTAGCTTTATCTGGCCCAGTTGAAGCTCTTTTGGATGGAGCTAATAGTGATACTTGGCCATCAATAAGGAGCCTTCTTAAGCGTGAGATGGCATCAGCAGTTTTAGGGTTCTCTGCTGCGCTTAATGCATTTGATATGGATGAAGAAACAAGACAGAACATGATTTTGAGTTTAGAGGATTTTGCAAAAGGTGTCGTAGAAGGAAAGGCTAAGGAAGAAGCTGGAAGGGTTCTGATCCGTATGAAGGACAGGTTTACAATGTTATTTAGTCATGATTCCGAATCAATGCCTCGTGTTTGGACGGGGAAAGAAGATATTCGAGCTATCACTAAAACTGCTCGCTCTGCTTCTTTGAAGTTACTATCTGTTATGGCTGCACTTCGTTTGGATGATGGTGATAAAGATAATATTGAGAAAACATTAGCAGTTACATTGCTGGATTCATCAAGCGGTGCTGTTAGAGATAGGAGTATTACTGCGGCTGATCCGCTAGCTACTAGCAGTTGGGAACAGATTCCACCAACTAAGACACTGATTACACCTGTCCAGTGCAAATCTTTGTGGAGGCAGTTCAAAATGGAGACAGAGTATAGTGTTTCTCAAGCCATTTCTGCACAGGAGGCCAACAAGCGCAATAACAACTGGCTACCTCCCCCATGGGCAATACTCGCTTTGGTTATTTTGGGATTCAATGAATTTATGACCCTTCTAAAAAATCCTTTGTATTTGGGTGTCATCTTTGTTGTTTTTCTTCTCGTGAAAGCCCTGTGGGTGCAACTTAACATTGCTGGTGAATTTAGCCATGGAATACTTCCGGGACTCATTTCCTTGTCCACCAAGTTTGTTCCAACAATCATGAACCTTATGAAAAGACTAGCAGAGGAGGGGAGTAACGCTGCAACTAACAACAATCCACAGAGAAACACATCACAAAACAACTCCAATGCTGTTCCTGTTGGCAGCTCTGTTTCATCTAGTTCTTCATCCAACGTAACCTCGTTGGATAATGGAAGCAGATACACCAGTTCATCAAAAGATGAGTAA 2439 0.419 MATNDTCCSTQLIDGDGVFNATGIDKFMKEVKLAECGLSYAVVSIMGPQSSGKSTLLNNLFNTNFREMDAFKGRSQTTKGIWMARCAGIEPCTLVMDLEGTDGRERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTMLFVIRDKTRTPLENLEPVLREDIQKIWDSVPKPQAHLETPLSEFFNVEVVALSSYEEKEEQFREQVANLRQRFHQSIAPGGLAGDRRGAVPASGFSFSSQQIWKVIKENKDLDLPAHKVMVATVRCEEIANEKYAAFVANEEWCQLEETVQSNPIPGFGKKINSLLHAGLSEYDAEATYFDEGVRTAKQKQLQDKLLQLVQPAYQSALGHIRSGTLEKFKDSLEKALKGGERFSAAANSCIGSCVAQFDEACADVVIEVANWDTSKVREKLLRDIDAHVASVREAKISELVSSYEEKLKLALSGPVEALLDGANSDTWPSIRSLLKREMASAVLGFSAALNAFDMDEETRQNMILSLEDFAKGVVEGKAKEEAGRVLIRMKDRFTMLFSHDSESMPRVWTGKEDIRAITKTARSASLKLLSVMAALRLDDGDKDNIEKTLAVTLLDSSSGAVRDRSITAADPLATSSWEQIPPTKTLITPVQCKSLWRQFKMETEYSVSQAISAQEANKRNNNWLPPPWAILALVILGFNEFMTLLKNPLYLGVIFVVFLLVKALWVQLNIAGEFSHGILPGLISLSTKFVPTIMNLMKRLAEEGSNAATNNNPQRNTSQNNSNAVPVGSSVSSSSSSNVTSLDNGSRYTSSSKDE 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03703 812 Pfam Root hair defective 3 GTP-binding protein (RHD3) GTPase domain 46 281 - -
Vivi7g03703 812 MobiDBLite consensus disorder prediction 762 812 - -
Vivi7g03703 812 Hamap Protein SEY1 [SEY1]. 9 762 IPR008803 -
Vivi7g03703 812 Pfam Sey1 three-helix bundle domain 323 760 IPR046758 -
Vivi7g03703 812 PANTHER PROTEIN SEY1 5 778 IPR008803 -
Vivi7g03703 812 MobiDBLite consensus disorder prediction 762 805 - -
Vivi7g03703 812 ProSiteProfiles GB1/RHD3-type guanine nucleotide-binding (G) domain profile. 37 252 IPR030386 GO:0005525
Vivi7g03703 812 FunFam Protein ROOT HAIR DEFECTIVE 3 homolog 18 273 - -
Vivi7g03703 812 Coils Coil 218 238 - -
Vivi7g03703 812 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 275 IPR027417 -
Vivi7g03703 812 CDD GBP 36 239 - -
Vivi7g03703 812 Gene3D - 18 248 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03703 Vivi-Chr7 102952586 102960481 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03703 K22698 - gmx:100777656 1326.61