Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03646 ATGTTTCCTTCATTATTGTTTGGTAGAGGCCAAAAACTGAAGGGAACTGTGGTGTTGATGCAAAAGAATGTTTTGGACATCAATGCCCTCACTGCAGCTCAAAGCCCCACCGGTATCATCGGTGGTGCCCTTGGTGCTATTGGCAGTATCACCGGCTCTATAATTGATACCGCCACCTCCTTCTTGGGACGTTCTGTCGCTCTCAAGTTGATCAGTTGTACCAGTGCCGATGCAAGTGGAAAAGGAAGAGTGTCAAACCCGGCATTCTTGGAAGGTCTTGTTACCTCCATACCAACATTGGGAGACAAACAATGTGCTTTCAGTGTTTATTTTGATTGGGACAGTAATATGGGAATTCCAGGAGCTTTTTACATTGATAATTTTATGCAAGGTGAATTCTTCCTTGTGAGTTTGACACTTGAAGATGTTCCAAATCATGGAACCATCAACTTTGTTTGTAACTCATGGATTTACAATTATAGAAAGTATAAAACTAACCGCATCTTCTTTGCAAACAAGACATATCTTCCAAGTGAAACTCCGGCTCCATTAATGTACTACAGACAAGAAGAGTTAAAGACTTTAAGAGGAAATGGAACTGGAGAACGTAAAGAATGTGATAGAATATATGATTATGATGTTTACAATGATTTGGGAGCTCCTGACAAAAAAGCCACCTTGGCTCGTCCAGTTCTTGGAGGATCAAGCATTCTGCCTTACCCTCGAAGGGGAAGAACTGGCCGACAACCAACTAGAAAAGATCCTAAGAGTGAGAGTCGAAGTGACATTGTTTATCTTCCAAGAGATGAATCATTTGGTCATGTGAAGTCATCAGACTTTCTTGTTTACATACTCAAATCAGCATCCCAAAATATCATACCTCAATTGAAATCTGTAGTTACATTACAACTCAATAACCCTGAGTTTAACACGTTTGAAGACGTGCGCTCGCTTTATGATGGTGGAATTAAGCTTCCTACTGAGATACTAAGCCAGATTAGTCCAATACCATTGTTCAAGGAACTCTTCCGATCTGACGGTGAATCTGCACTTAAATTTCCACCACCAAAAGTGGTTCAAGTGGATCATTCTGCATGGATGACTGATGAGGAATTCGCAAGGGAGATGATTGCTGGTGTCAATCCACACATCATCAAAAAACTTCAGAATTTTCCACCAAAGAGCAGTTTAGATAACCAACTCTATGGTGATAACACCAGTACAATAACCAAAGAACACTTGGAGCCAAACATGGGCGGAGTCACCGTAGAAGGGGCTATCCAAACCAACAGATTGTACATACTTGATCACCATGATCCATTATTTCCATATTTGAGAAAAATAAATGCAACTGATACAAAGGCATATGCTACAAGGACCATCCTTTTCTTGAAAGATGATGGAACCTTGAAGCCATTGGCCATTGAACTGAGTACTCCACATCCCGACGGTGATAGTTTTGGTCCTGTTAGTAAAATTTACCTGCCTGCAAGTGAAGGTGTTGAAGCTTCAATTTGGCTCCTTGCCAAGGCTTTTGTTATCGTAAATGACTCGTGTTATCACCAACTTGTTAGCCATTGGTTGAACACTCATGCTGTTGTTGAGCCATTCATCATAGCAACAAATAGACATCTTAGTGTGGTTCATCCTATTCATAAACTTTTACTTCCACATTACCGTGACACAATGAACATCAATGCACTTGCTAGAAATGTGTTGGTGAATGCTGAGGGTATTATAGAATCAACATTCTTGTGGGGAAATTATGCTATGGAAATGTCTGCTGTTGTTTACAAGGATTGGGTTTTCACTGACCAAGGACTACCTAACGATCTAATCAAAAGAGGAGTGGCTGTTGAGGATTCATCTGCTCCATACGGTCTTCGTCTTTTTATAGAGGACTACCCTTATGCTTCTGATGGACTAGAGATATGGGCTGCTATTGAGACATGGGTTGAGGAATATGTGAATTTCTACTACAAATCAGATGGAGCTATTGCACAAGATTCTGAACTCCAAGCATTTTGGAAAGAAGTTGTAGAGGTGGGTCATGGCGACTTGAAGAATGCTACATGGTGGTTTAAGATGCAAACTCGTAAGGAGTTGATCGAAGCATGCACTATCCTCATATGGATAGCTTCAGCACTTCATGCCGCTGTAAATTTTGGACAGTATCCGTATGGAGGATACATCCTTAACCGGCCAACTAAGAGCAGGAGATTCATGCCTGAGAAAGGAACCCCTGAGTATGATGAGCTTTCTAAGAACTACGAGAAGGCGTATTTGAGGACAATCACACCAAAGAAGGATACTCTTACTGACCTGACCATTATAGAGATCCTGTCAAGGCATGCTTCTGATGAGCAATACCTTGGAGAGAGAATTGAAGGTGATGTTTGGACTTGTGATTCACAACCAAAAGAGGCTTTCAAGAGGTTTGGAAAGAAGCTGGCTGAAATTGAAGAAAAACTCACTCAAAGGAACAAAGATGAGAAGCTAAGGAATAGGTATGGGCCTGTGGAGATGCCTTACACTTTGCTTTGTCCTTCTAGTGCGGAAGGATTGACTTGCCGAGGAATCCCCAATAGTATCTCTATCTAA 2601 0.4129 MFPSLLFGRGQKLKGTVVLMQKNVLDINALTAAQSPTGIIGGALGAIGSITGSIIDTATSFLGRSVALKLISCTSADASGKGRVSNPAFLEGLVTSIPTLGDKQCAFSVYFDWDSNMGIPGAFYIDNFMQGEFFLVSLTLEDVPNHGTINFVCNSWIYNYRKYKTNRIFFANKTYLPSETPAPLMYYRQEELKTLRGNGTGERKECDRIYDYDVYNDLGAPDKKATLARPVLGGSSILPYPRRGRTGRQPTRKDPKSESRSDIVYLPRDESFGHVKSSDFLVYILKSASQNIIPQLKSVVTLQLNNPEFNTFEDVRSLYDGGIKLPTEILSQISPIPLFKELFRSDGESALKFPPPKVVQVDHSAWMTDEEFAREMIAGVNPHIIKKLQNFPPKSSLDNQLYGDNTSTITKEHLEPNMGGVTVEGAIQTNRLYILDHHDPLFPYLRKINATDTKAYATRTILFLKDDGTLKPLAIELSTPHPDGDSFGPVSKIYLPASEGVEASIWLLAKAFVIVNDSCYHQLVSHWLNTHAVVEPFIIATNRHLSVVHPIHKLLLPHYRDTMNINALARNVLVNAEGIIESTFLWGNYAMEMSAVVYKDWVFTDQGLPNDLIKRGVAVEDSSAPYGLRLFIEDYPYASDGLEIWAAIETWVEEYVNFYYKSDGAIAQDSELQAFWKEVVEVGHGDLKNATWWFKMQTRKELIEACTILIWIASALHAAVNFGQYPYGGYILNRPTKSRRFMPEKGTPEYDELSKNYEKAYLRTITPKKDTLTDLTIIEILSRHASDEQYLGERIEGDVWTCDSQPKEAFKRFGKKLAEIEEKLTQRNKDEKLRNRYGPVEMPYTLLCPSSAEGLTCRGIPNSISI 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03646 866 PRINTS Plant lipoxygenase signature 239 258 IPR001246 GO:0016491
Vivi7g03646 866 PRINTS Plant lipoxygenase signature 351 367 IPR001246 GO:0016491
Vivi7g03646 866 PRINTS Plant lipoxygenase signature 167 188 IPR001246 GO:0016491
Vivi7g03646 866 PRINTS Plant lipoxygenase signature 456 480 IPR001246 GO:0016491
Vivi7g03646 866 PRINTS Plant lipoxygenase signature 778 792 IPR001246 GO:0016491
Vivi7g03646 866 PRINTS Plant lipoxygenase signature 390 409 IPR001246 GO:0016491
Vivi7g03646 866 PRINTS Plant lipoxygenase signature 306 327 IPR001246 GO:0016491
Vivi7g03646 866 PRINTS Plant lipoxygenase signature 206 222 IPR001246 GO:0016491
Vivi7g03646 866 PRINTS Plant lipoxygenase signature 141 159 IPR001246 GO:0016491
Vivi7g03646 866 Pfam Lipoxygenase 184 849 IPR013819 GO:0016702|GO:0046872
Vivi7g03646 866 Pfam PLAT/LH2 domain 78 170 IPR001024 GO:0005515
Vivi7g03646 866 Gene3D - 365 498 - -
Vivi7g03646 866 MobiDBLite consensus disorder prediction 235 262 - -
Vivi7g03646 866 Gene3D PLAT/LH2 domain 4 175 - -
Vivi7g03646 866 FunFam Lipoxygenase 500 865 - -
Vivi7g03646 866 MobiDBLite consensus disorder prediction 247 262 - -
Vivi7g03646 866 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 174 866 IPR013819 GO:0016702|GO:0046872
Vivi7g03646 866 ProSitePatterns Lipoxygenases iron-binding region signature 2. 548 558 IPR020834 GO:0016702|GO:0046872
Vivi7g03646 866 SMART LH2_4 11 172 IPR001024 GO:0005515
Vivi7g03646 866 FunFam Lipoxygenase 176 275 - -
Vivi7g03646 866 Gene3D - 499 865 - -
Vivi7g03646 866 CDD PLAT_LH2 12 172 IPR042057 -
Vivi7g03646 866 ProSitePatterns Lipoxygenases iron-binding region signature 1. 521 535 IPR020833 GO:0016702|GO:0046872
Vivi7g03646 866 SUPERFAMILY Lipoxigenase 176 866 IPR036226 -
Vivi7g03646 866 Gene3D - 276 364 IPR027433 -
Vivi7g03646 866 PANTHER LIPOXYGENASE 10 866 IPR000907 GO:0016702|GO:0034440|GO:0046872
Vivi7g03646 866 ProSiteProfiles PLAT domain profile. 43 171 IPR001024 GO:0005515
Vivi7g03646 866 FunFam Lipoxygenase 365 498 - -
Vivi7g03646 866 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 11 175 IPR036392 GO:0005515
Vivi7g03646 866 Gene3D - 176 275 - -
Vivi7g03646 866 PRINTS Lipoxygenase signature 503 520 IPR013819 GO:0016702|GO:0046872
Vivi7g03646 866 PRINTS Lipoxygenase signature 521 538 IPR013819 GO:0016702|GO:0046872
Vivi7g03646 866 PRINTS Lipoxygenase signature 541 561 IPR013819 GO:0016702|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03646 Vivi-Chr7 102269789 102273436 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03646 5 866 Acyl Lipid Metabolism Gene Families AT1G55020 56.250 0.0 992
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03646 K15718 - gmx:100816880 1400.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g03646 7 102269789 102273436 Vivi2g07373 2 218015711 218019286 PCT