Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03644 ATGACTACATCACTGAAAGGAATTGTGGTGTTGGTGCAAAAGAATTCGTTTCACTTTAACCCTCACGCAGCAGCTCAAAGCTTTGGCGGTTTCATAGAAACTGTTATCGATGGTCCTGATGACATCGATGACTCTGCACTTGATACCGCCGAATCTTTCTTAGGATTGTCCGTGGCTCTCAGATTGATCAGTGCTACAAGGGCTGACGGAAATGGGCAGGGAATAGTTGGAAAACAAACATTTTTGGAAGGTGTTCTCACTTCCATACCAACATTGGAAGACAAACAAGCTGCTTATAGTATTCATTTTGAATGGGACCATAACATGGGAGTTCCAGGAGCTTTTTATATTGAGAATTTTAAGCAAGATGAATTCTTCCTTGTGAGCTTGACACTTGAAGATGTTCCAAAACATGGAACCTTAAACTTTGTTTGCAACTCATGGATTTACAGTGTCACAAAGTACGAAACTAACAGAATATTCTTTACCAACAAGACATACCTTCCAAATGAAATACCCTATCCGTTAGTGTATTATGTACATGAAGAATTGAAAGCTTTAAGAGGATATGGAACTGGAGAGCGCAAGGTATGGGAAAGAATATATGATTATGATGTCTACAATGATTTGGGTGAGCCGGACAAAGATGCTTCCTGGGCTCGTCCAATTCTTGGGGGACCAGGATCCTTGCCTTACCCTCGAAGGGGAAGAACGGGAAGGAAAGCAACCGAAACAGATCCAAAGAGTGAGAGTCGAACTGACTATTTCTACATACCTAGAGATGAATTACTTGGCCACGTGGAATCGTCAGACTTTCTTGTTGACATATTCAAATTAGTATCTCGAAATACCATACCTGAGATAAGATCTCTGGATCTACCCGAGTTTAACACCTTTGAAGACGTGCTCTCTCTTTTCTATGGTGAATCAAGTAAATTTTCGATGCCAAAAGTTATTCAAGTGGATCATTCTGCATGGATGACTGATGAGGAATTCGCAAGAGAGATGATTGCTGGCGTAAATCCAATGGTCATCAGAAAAATTTCGGAGTTTCCACCAGAGAGCAAGGTAGATAGGCAACTCTTTGGTGATAATACCACCACAATAACCAAAGAACACTTGGAGCCAAACATGGATGGGGTCAATGTGGAACAAGCTATACAAAACAATAGATTGTATATACTTGATCATTACGATTCAATATTTCCATTTTTGAGGAAAATAAATGAAACTGGGGCCAAGGCATATGCTTCCAGGACCATTCTTTTTTTGCAAGACGATGGAACTTTGAAGCCATTGGCCATTGAACTAAGTCTACCACATCCTAAAGGTGATATTTTTGGTTCTGTTAGTAATGTTTACTTGCCAGCAAGTGAAGGTGTCGAAGCTTCAATTTGGCTCCTTGCCAAAGCTTACGTTGTTGTAAATGACGCATGTTATCACCAACTTATCAGCCATTGGTTGAACACTCATGCTGTTGTTGAGCCATTCATCATAGCAACTAACAGACATCTTAGTGTGGTTCATCCTATTCAAAAATTATTACTTCCACACTACCGTAACACGATGAACATAAATGCCAGTGCACGAGATACTTTGATCAGTGCAGGGGGCATTATAGAGTCAACATACTTGTTGGGAAGGTATACTATGGAAATGTCTGCTGTTGTCTACAAAGATTGGGTTTTCACTGAAGCAGGACTACCTAGTGATCTAATCAAAAGAGGAGTAGCTGTTGAGGATCCGTCTTCTCCACACGGTCTTCGCCTTCTGATAAAGGACTACCCTTATGCTTCTGATGGACTAGAGATATGGGGTGCTATTAAGTCATGGGTTGAAGAATATGTGAATTTCTACTACAAGTCAGATGAAACTGTTGTACATGATTCCCAACTCCATGCATTTTGGAAAGAACTTGTAGAAGTGGGTCATGGTGACTTGAAGCATGCAACATGGTGGTTTAAAATGCACACTCGTGCAGAATTGATTGAAGCTTGTACCATCCTCATATGGATTGCTTCATCACTTCATGCATCGGTTAACTTTGGACAATACCCTTACGGAGGATACATTGTTAACCGACCAACTAAAAGCCGAAGATTCATGCCTGAGGAAGGATCTCCTGAATATGATGAACTTGCTAAGGACTACGAGAAGGTGTATTTGAGTACAATCACACCACAGGCTGAAACCATTTGGAACATGACCGTTATTGAGGTATTGTCAACGCATGTTATTGATGAGCAATACCTCGGACAGAGAATCGAAGGTGATCTTTGGACTTCTGATTCACAGCCAATAGAGGCCTACAAGAGGTTTGGAACAAAGTTGGCTGAAATTGAGAAAAAACTCATTGAAAAGAACAATGATAAGTCATTGAGAAACCGATATGGGCCGGTGAAGATGCCATACACTATACTTTATCCTACCAGTGAACCAGGATTGACCTTTAGAGGCATTCCTAACAGTGTCTCCATCTAA 2481 0.4079 MTTSLKGIVVLVQKNSFHFNPHAAAQSFGGFIETVIDGPDDIDDSALDTAESFLGLSVALRLISATRADGNGQGIVGKQTFLEGVLTSIPTLEDKQAAYSIHFEWDHNMGVPGAFYIENFKQDEFFLVSLTLEDVPKHGTLNFVCNSWIYSVTKYETNRIFFTNKTYLPNEIPYPLVYYVHEELKALRGYGTGERKVWERIYDYDVYNDLGEPDKDASWARPILGGPGSLPYPRRGRTGRKATETDPKSESRTDYFYIPRDELLGHVESSDFLVDIFKLVSRNTIPEIRSLDLPEFNTFEDVLSLFYGESSKFSMPKVIQVDHSAWMTDEEFAREMIAGVNPMVIRKISEFPPESKVDRQLFGDNTTTITKEHLEPNMDGVNVEQAIQNNRLYILDHYDSIFPFLRKINETGAKAYASRTILFLQDDGTLKPLAIELSLPHPKGDIFGSVSNVYLPASEGVEASIWLLAKAYVVVNDACYHQLISHWLNTHAVVEPFIIATNRHLSVVHPIQKLLLPHYRNTMNINASARDTLISAGGIIESTYLLGRYTMEMSAVVYKDWVFTEAGLPSDLIKRGVAVEDPSSPHGLRLLIKDYPYASDGLEIWGAIKSWVEEYVNFYYKSDETVVHDSQLHAFWKELVEVGHGDLKHATWWFKMHTRAELIEACTILIWIASSLHASVNFGQYPYGGYIVNRPTKSRRFMPEEGSPEYDELAKDYEKVYLSTITPQAETIWNMTVIEVLSTHVIDEQYLGQRIEGDLWTSDSQPIEAYKRFGTKLAEIEKKLIEKNNDKSLRNRYGPVKMPYTILYPTSEPGLTFRGIPNSVSI 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03644 826 Gene3D PLAT/LH2 domain 1 167 - -
Vivi7g03644 826 Gene3D - 168 267 - -
Vivi7g03644 826 Gene3D - 295 342 IPR027433 -
Vivi7g03644 826 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 4 167 IPR036392 GO:0005515
Vivi7g03644 826 SMART LH2_4 3 164 IPR001024 GO:0005515
Vivi7g03644 826 PRINTS Plant lipoxygenase signature 198 214 IPR001246 GO:0016491
Vivi7g03644 826 PRINTS Plant lipoxygenase signature 293 314 IPR001246 GO:0016491
Vivi7g03644 826 PRINTS Plant lipoxygenase signature 133 151 IPR001246 GO:0016491
Vivi7g03644 826 PRINTS Plant lipoxygenase signature 159 180 IPR001246 GO:0016491
Vivi7g03644 826 PRINTS Plant lipoxygenase signature 738 752 IPR001246 GO:0016491
Vivi7g03644 826 PRINTS Plant lipoxygenase signature 231 250 IPR001246 GO:0016491
Vivi7g03644 826 MobiDBLite consensus disorder prediction 223 248 - -
Vivi7g03644 826 ProSitePatterns Lipoxygenases iron-binding region signature 1. 481 495 IPR020833 GO:0016702|GO:0046872
Vivi7g03644 826 FunFam Lipoxygenase 460 825 - -
Vivi7g03644 826 ProSiteProfiles PLAT domain profile. 29 163 IPR001024 GO:0005515
Vivi7g03644 826 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 166 826 IPR013819 GO:0016702|GO:0046872
Vivi7g03644 826 PANTHER LIPOXYGENASE 33 826 IPR000907 GO:0016702|GO:0034440|GO:0046872
Vivi7g03644 826 Pfam Lipoxygenase 310 809 IPR013819 GO:0016702|GO:0046872
Vivi7g03644 826 Pfam Lipoxygenase 176 308 IPR013819 GO:0016702|GO:0046872
Vivi7g03644 826 SUPERFAMILY Lipoxigenase 168 826 IPR036226 -
Vivi7g03644 826 FunFam Lipoxygenase 325 458 - -
Vivi7g03644 826 Pfam PLAT/LH2 domain 71 162 IPR001024 GO:0005515
Vivi7g03644 826 Gene3D - 343 477 - -
Vivi7g03644 826 PRINTS Lipoxygenase signature 463 480 IPR013819 GO:0016702|GO:0046872
Vivi7g03644 826 PRINTS Lipoxygenase signature 501 521 IPR013819 GO:0016702|GO:0046872
Vivi7g03644 826 PRINTS Lipoxygenase signature 481 498 IPR013819 GO:0016702|GO:0046872
Vivi7g03644 826 ProSitePatterns Lipoxygenases iron-binding region signature 2. 508 518 IPR020834 GO:0016702|GO:0046872
Vivi7g03644 826 Gene3D - 478 824 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03644 Vivi-Chr7 102253013 102256504 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03644 2 826 Acyl Lipid Metabolism Gene Families AT1G55020 51.326 0.0 892
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03644 K15718 - gmx:100816880 1179.08