Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03642 ATGACTTCATTGGTGAAAGATATCCATGGAGGAGGTGGCCAAATCCTGAAGGGAACTGTGGTGTTGATGCAAAAGAATGTGTCAAACTTCAATCCTGTCTCTGCAGCTAAAAGTTTTAGCCCTCTCATTGGAAATGTCATCTGTGCCAGTACTGGTGATGATAGCGATGAGTGTATAGTTGATACCACCACTACCTTCTTGAGCAGTTCATTAGCTCTCAAGTTGATTAGTGCTACCAGGGCTGATGGAAATGGAAAGGGAAAAGTGGGAAAGAAAACTTTTTTGAAAGGTCCTCTCACCTCCATACCAACATTAAAAGAAAAACAATTTGCTTTTAGTATTCATTTTGAATGGGACCATAACATGGGAATTCCGGGAGCTTTTTATATTGAAAATTTTACGCATGATGAAGTTTTCCTTGTGAGTTTGACACTTGAAGATGTTTCAAACCATGGAACCATAAACTTTGTTTGCAACTCGTGGGTTTACAATGCTCAAAAGTACAAAAGTGAACGCATCTTCTTTGCCAATAAGACATATCTTCCAAGTGAAACTCCATCTCCATTAGTGCACTACATACAAGAAGAATTGAAGACTTTAAGAGGAGATGGAAGTGGAGAGCGCAAGGAATGGGATAGAATCTACGATTATGATGTCTACAACGATTTGGGTCAGCCTGATAGACATGCTACTTTGGCTCGTCCAGTTCTTGGGGGATCAACCACACTGCCTTACCCTCGAAGAGGAAGAACCGGGAGAGAACTGATAGGAAGAGATCCAAAAACTGAGAGTCGGAGTGACTATTTTTACATTCCAAGAGATGAATTGCTTGGCCATGTGGAATCGTCCGACTTTCTTGTTGATGTCTTCAAAAGATTATCTCAAAATGCCAAATCTCAATTATTATCTCTAAAACGTTTAGGCATGTTTAAAAATGATCAATCCGAGTTTAACACCTTTCAAGATGTGCTCTCGCTTTTCTATGGTGAATCAAATAAATCTCCACTACCAAAAGTGATCGAAGTGGATCATTCGGCGTGGATGACTGATGAGGAATTTGCAAGGGAGATGATTGCTGGTGTGAATCCAAATGTCATCACAAAACTTTTGGAGTTTCCACCAAAGAGCAAGGTTGATAGCCAACTCTATGGTGATAATACCACCACAATAACCAAAGAACACTTGGAGCCAAACATGGATGGGGTCAACGTAGAACAAGCTATCCAAAACAACAGATTATACATACTTGATCACCATGATCCACTATTTCCATATTTGAGGAAATTAAGTGCAACTGGGGCAAAGGCCTATGCTTCAAGGACCATTCTTTTCTTGCAAAATGATGGAACTTTGAAGCCATTAGCCATTGAACTAAGTACACCGCATCCTGAAGGTGATAGTTTTGGTCCTGTAAGTAATGTTTACTTGCCCGCAACTGAAGGTGTTGAAGCTTCAATTTGGCTCCTTGCCAAGGCATACGTTGTTGTAAACGACTCATGTTATCACCAACTTATCAGCCATTGGTTGAACACTCATGCTGTTGTTGAGCCATTCATCATAGCAACAAACAGGCAACTTAGTGTGGTTCATCCTATTCATAAACTTTTACTTCCACACTATCGTAACACAATGAACATAAATGCTGGTGCACGGAAAATTTTGATCAGTGCGGGAGGTATTATAGAGTCAGCATACTTGTTGGGAAATTATACTATGGAAATGTCTGCTGCTGTTTACAAAGATTGGGTTTTCACTGACCAAGGACTACCTAATGATCTAATCAAAAGAGGAGTGGCAGTTGAGGATCCATCTGCTCCATATGGTGTTCGCCTTCTGATAGAGGACTACCCTTATGCTTCTGATGGACTAGAGATATGGGCTGCTATTAAGTCATGGGTTGAAGAATATGTGAATTTCTATTACAAGTCAGATGCAACTATTGCACATGATTCTGAACTCCAAGCTTTCTGGAAAGAACTTGTAGAAGTAGGTCACGGTGATTTGAAGAATGCTACATGGTGGTTTAAGATGCAAACTCGTAATGAGTTGATTGAAGCATGCACTATCCTCATATGGATTGCTTCAACACTTCACGCATCTGTTAATTTTGGACAATATCCTTACGGAGGATACATTGTTAACCGACCAACTAAAAGCAGAAGATTCATGCCTGAGAAAGGATCTCCTGAGTATGACGAGCTTGCTAAGGACTACGAGAAAGTGTATTTGAGTACAATCACACCAAAGAATGGTGCCCTTTTGAACATGACCATGCTGGAGTTACTGTCAACACATGTTTCTGATGAGCAGTACCTTGGACATAGAATTGAAGGTGATATTTGGACTTTTGATTCACAGCCAATAGAGGCCTACAAGAAGTTTGGAACAAAGTTGGCTGAAATTGAGAGAAAGCTCATTGAAAGAAACAATGATGAGTCATTGAGAAATCGATACGGGCCTGTGAAGATGCCATACACTATACTTTATCCTTCCAATGAAGCAGGATTGACTTTTAGAGGCATTCCTAATAGTATCTCCATCTAA 2544 0.4017 MTSLVKDIHGGGGQILKGTVVLMQKNVSNFNPVSAAKSFSPLIGNVICASTGDDSDECIVDTTTTFLSSSLALKLISATRADGNGKGKVGKKTFLKGPLTSIPTLKEKQFAFSIHFEWDHNMGIPGAFYIENFTHDEVFLVSLTLEDVSNHGTINFVCNSWVYNAQKYKSERIFFANKTYLPSETPSPLVHYIQEELKTLRGDGSGERKEWDRIYDYDVYNDLGQPDRHATLARPVLGGSTTLPYPRRGRTGRELIGRDPKTESRSDYFYIPRDELLGHVESSDFLVDVFKRLSQNAKSQLLSLKRLGMFKNDQSEFNTFQDVLSLFYGESNKSPLPKVIEVDHSAWMTDEEFAREMIAGVNPNVITKLLEFPPKSKVDSQLYGDNTTTITKEHLEPNMDGVNVEQAIQNNRLYILDHHDPLFPYLRKLSATGAKAYASRTILFLQNDGTLKPLAIELSTPHPEGDSFGPVSNVYLPATEGVEASIWLLAKAYVVVNDSCYHQLISHWLNTHAVVEPFIIATNRQLSVVHPIHKLLLPHYRNTMNINAGARKILISAGGIIESAYLLGNYTMEMSAAVYKDWVFTDQGLPNDLIKRGVAVEDPSAPYGVRLLIEDYPYASDGLEIWAAIKSWVEEYVNFYYKSDATIAHDSELQAFWKELVEVGHGDLKNATWWFKMQTRNELIEACTILIWIASTLHASVNFGQYPYGGYIVNRPTKSRRFMPEKGSPEYDELAKDYEKVYLSTITPKNGALLNMTMLELLSTHVSDEQYLGHRIEGDIWTFDSQPIEAYKKFGTKLAEIERKLIERNNDESLRNRYGPVKMPYTILYPSNEAGLTFRGIPNSISI 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03642 847 FunFam Lipoxygenase 481 846 - -
Vivi7g03642 847 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 16 180 IPR036392 GO:0005515
Vivi7g03642 847 Gene3D - 181 280 - -
Vivi7g03642 847 Pfam Lipoxygenase 189 331 IPR013819 GO:0016702|GO:0046872
Vivi7g03642 847 Pfam Lipoxygenase 333 830 IPR013819 GO:0016702|GO:0046872
Vivi7g03642 847 Pfam PLAT/LH2 domain 84 175 IPR001024 GO:0005515
Vivi7g03642 847 ProSitePatterns Lipoxygenases iron-binding region signature 1. 502 516 IPR020833 GO:0016702|GO:0046872
Vivi7g03642 847 Gene3D - 329 363 IPR027433 -
Vivi7g03642 847 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 179 847 IPR013819 GO:0016702|GO:0046872
Vivi7g03642 847 PANTHER LIPOXYGENASE 15 847 IPR000907 GO:0016702|GO:0034440|GO:0046872
Vivi7g03642 847 SUPERFAMILY Lipoxigenase 181 847 IPR036226 -
Vivi7g03642 847 Gene3D - 364 498 - -
Vivi7g03642 847 Gene3D - 499 845 - -
Vivi7g03642 847 ProSiteProfiles PLAT domain profile. 43 176 IPR001024 GO:0005515
Vivi7g03642 847 Gene3D PLAT/LH2 domain 9 180 - -
Vivi7g03642 847 PRINTS Plant lipoxygenase signature 172 193 IPR001246 GO:0016491
Vivi7g03642 847 PRINTS Plant lipoxygenase signature 244 263 IPR001246 GO:0016491
Vivi7g03642 847 PRINTS Plant lipoxygenase signature 759 773 IPR001246 GO:0016491
Vivi7g03642 847 PRINTS Plant lipoxygenase signature 146 164 IPR001246 GO:0016491
Vivi7g03642 847 PRINTS Plant lipoxygenase signature 437 461 IPR001246 GO:0016491
Vivi7g03642 847 PRINTS Plant lipoxygenase signature 211 227 IPR001246 GO:0016491
Vivi7g03642 847 SMART LH2_4 14 177 IPR001024 GO:0005515
Vivi7g03642 847 FunFam Lipoxygenase 346 479 - -
Vivi7g03642 847 ProSitePatterns Lipoxygenases iron-binding region signature 2. 529 539 IPR020834 GO:0016702|GO:0046872
Vivi7g03642 847 PRINTS Lipoxygenase signature 502 519 IPR013819 GO:0016702|GO:0046872
Vivi7g03642 847 PRINTS Lipoxygenase signature 484 501 IPR013819 GO:0016702|GO:0046872
Vivi7g03642 847 PRINTS Lipoxygenase signature 522 542 IPR013819 GO:0016702|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03642 Vivi-Chr7 102240850 102249087 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03642 1 847 Acyl Lipid Metabolism Gene Families AT1G55020 51.178 0.0 904
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03642 K15718 - gmx:100816880 1211.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g03642 7 102240850 102249087 Vivi2g07374 2 218020149 218023815 PCT