Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03639 ATGTTTGGCATCTTAAACACTAATAAGAGCCAGAAAATCAAGGGAACTGTGGTGTTGATGCCCAAAAATGTTTTGGACTTCAACGCCATTACTTCCATCCCTAAGGGCAGTGTTCTCGACGCCCCCGGAAAAATCATCGGCGGCGTCACCGGCATTGTTGGCGGAGTTATTGACACCGCCACCGCCTTCTTAGGCCGCAATGTTTCCATCCAGTTGATCAGTGCCACTAAAACGGATGCTGGTGGAAAGGGAGAAGTTGGAAAGGAGGCGTTTTTGAGCAGTCATCTGCCTCGGTTACCAACATTGGGAGCAAGACAAGATGCATTCAGTATTTATTTTGAATATGATGCTAATTTTGGAATTCCTGGAGCTTTTTACATAAGAAACTACACTTCAGCTGAGTTCTTCCTTGTCAGTGTAACTCTTGAAGACATTCCTAACCGTGGATCTGTTCAGTTTGTTTGTAACTCATGGATTTACAATTTCAGAAGTTACAATAAGGACAGAATCTTCTTCACCAATGATACTTATCTTCCAAGTCAAACACCAGCTGCATTGACTCACTTTAGAAAAGAAGAGTTGCTGAATCTAAGAGGAGATGGAACTGGTGAACGCAAGGTTTATGATAGGATATATGATTATGATGTATATAATGATCTTGGAAATCCTGATTACGGCGACAAATTTGTTCGTCCGGTGCTCGGAGGGTCTAGCACTTATCCGTATCCTCGTAGGGTTAGGAGCGGCAGAAAATCAACCAGAAGAGACCCTAAGAGCGAAAAACCTGGTGAGATTTATGTTCCGAGAGATGAAAATTTTGGTCACTTGAAGTCATCGGACTTTCTTATGTATGGAATAAAATCGATTTCCCAAACTGTCATGCCTTTGCTTAAATCTGTGATTTGTGATGAGTTCGGTAGCTTCGATGAAGTGCGTGGACTTTTCGAAGGTGGGATTAAGCTTCCTACTGATATACTTAGCCAAATCGCCCCCTTACCGGCTCTTAAGGAAATCTTGCGCACAGATGGTGAACAAGTCCTCAAGTTTCCACCACCTCATGTAATCAAAGTTAGCAAGTCTGCATGGATGACTGATGAAGAATTTGGGAGAGAGATGGTTGCTGGTGTAAACCCTTGTGTGATCCGTCTTCTTCAAGAGTTCCCTCTGAAAAGTACTCTAGATACCGTTGTATACGGTGATCAATCTAGTACAATAACGAAAGAGCAGTTAGAGACTAACCTTGGTGAGCTCACAGTAGAACAGGCACTTAACGGAAAGAGATTATTCGTCTTAGATTACCATGATGCTTTCATGCCGTATTTGGAGAGGATTAACATAAATGCAAAGGCTTATGCCACTAGGACAATCTTGTTCTTGAAAGACGATGGAACTTTGAAGCCAATAGCCATTGAATTGAGTGTGCCACACTCAAATGGGGTTCAATATGGTGCTGAAAGCAAAGTAATTTTGCCTGCAGAAGACGGCAGTGTCGAAAGTACAATTTGGCTATTGGCCAAGGCTCATGTAATTGTAAATGATTCATGCTATCATCAACTCATGAGCCATTGGTTGAATACTCATGCGGTGATGGAACCGTTTATCATAGCAACAAACAGACATCTAAGTGTGCTTCACCCGATTAATAAGCTTTTATATCCTCACTTCCGTGACACAATAAATATCAATGGACAAGCTCGACAAGCTCTAATCAATGCCGAAGGCATTATTGAACAAACATTTCTACCTGGACCAAGTTCCGTTGAGATTTCTTCGGCAGTTTACAAGAATTGGGTTTTCACTGATCAAGCGTTACCTGCCGATCTTATCAAGAGAGGATTAGCTGTCGAGGACCCGTCTTCCCCCCATGGACTTCGTCTTGCGATAGAAGACTACCCTTATGCTGTAGATGGGCTAGAAATATGGGATGCTATCAAGGCATGGGTCCAAGAGTACGTCTCGTTGTATTATCCAACCGATGAAGCAGTGCAAAAGGACACTGAAATACAACCTTGGTGGAAGGAAGCTGTAGAAAAGGGTCACGGTGACTTGAAAGACAAGCCATGGTGGCCCAAGATGCAAACTATTCAAGACTTGGTTCAATCTTGCTCCATTATCATATGGACCGCTTCTGCTCTTCACGCAGCTGTTAACTTTGGACAATATCCTTACGGAGGATATATCCTCAACCGTCCAACTAATAGCCGAAGATTCATCCCAGAGAAAGGAACTCCAGAATACGCCGAGATGGAAAAAAGTCCTCAAAAGGCGTATCTGAAAACAATTACATCTAAATACCAGACTCTCATTGATCTTTCCGTGATTGAAATCTTGTCAAGGCATGCTTCTGATGAAGTGTACCTTGGCGAGAGGGATAGCAAGTATTGGACATCTGATTCAAGGGCGGTTCAAGCCTTCACAAAGTTTGGAACCAAACTCGCTGAAATTGAAGGGAAAATCCATAGCAGGAACAAAGACTCTAGTTTGAAGAACCGCTACGGACCGGTGCAACTGCCCTACAGTTTGCTCGTTGGAAAAAGTGAGGAAGGGTTAACCTTCAAAGGAATTCCCAACAGTATCTCTATTTGA 2586 0.4288 MFGILNTNKSQKIKGTVVLMPKNVLDFNAITSIPKGSVLDAPGKIIGGVTGIVGGVIDTATAFLGRNVSIQLISATKTDAGGKGEVGKEAFLSSHLPRLPTLGARQDAFSIYFEYDANFGIPGAFYIRNYTSAEFFLVSVTLEDIPNRGSVQFVCNSWIYNFRSYNKDRIFFTNDTYLPSQTPAALTHFRKEELLNLRGDGTGERKVYDRIYDYDVYNDLGNPDYGDKFVRPVLGGSSTYPYPRRVRSGRKSTRRDPKSEKPGEIYVPRDENFGHLKSSDFLMYGIKSISQTVMPLLKSVICDEFGSFDEVRGLFEGGIKLPTDILSQIAPLPALKEILRTDGEQVLKFPPPHVIKVSKSAWMTDEEFGREMVAGVNPCVIRLLQEFPLKSTLDTVVYGDQSSTITKEQLETNLGELTVEQALNGKRLFVLDYHDAFMPYLERININAKAYATRTILFLKDDGTLKPIAIELSVPHSNGVQYGAESKVILPAEDGSVESTIWLLAKAHVIVNDSCYHQLMSHWLNTHAVMEPFIIATNRHLSVLHPINKLLYPHFRDTININGQARQALINAEGIIEQTFLPGPSSVEISSAVYKNWVFTDQALPADLIKRGLAVEDPSSPHGLRLAIEDYPYAVDGLEIWDAIKAWVQEYVSLYYPTDEAVQKDTEIQPWWKEAVEKGHGDLKDKPWWPKMQTIQDLVQSCSIIIWTASALHAAVNFGQYPYGGYILNRPTNSRRFIPEKGTPEYAEMEKSPQKAYLKTITSKYQTLIDLSVIEILSRHASDEVYLGERDSKYWTSDSRAVQAFTKFGTKLAEIEGKIHSRNKDSSLKNRYGPVQLPYSLLVGKSEEGLTFKGIPNSISI 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03639 861 ProSitePatterns Lipoxygenases iron-binding region signature 2. 544 554 IPR020834 GO:0016702|GO:0046872
Vivi7g03639 861 PANTHER LIPOXYGENASE 10 861 IPR000907 GO:0016702|GO:0034440|GO:0046872
Vivi7g03639 861 ProSitePatterns Lipoxygenases iron-binding region signature 1. 517 531 IPR020833 GO:0016702|GO:0046872
Vivi7g03639 861 CDD PLAT_LH2 12 174 IPR042057 -
Vivi7g03639 861 Gene3D - 361 493 - -
Vivi7g03639 861 Gene3D - 178 276 - -
Vivi7g03639 861 Pfam Lipoxygenase 186 843 IPR013819 GO:0016702|GO:0046872
Vivi7g03639 861 Gene3D PLAT/LH2 domain 2 177 - -
Vivi7g03639 861 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 11 177 IPR036392 GO:0005515
Vivi7g03639 861 PRINTS Lipoxygenase signature 537 557 IPR013819 GO:0016702|GO:0046872
Vivi7g03639 861 PRINTS Lipoxygenase signature 517 534 IPR013819 GO:0016702|GO:0046872
Vivi7g03639 861 PRINTS Lipoxygenase signature 499 516 IPR013819 GO:0016702|GO:0046872
Vivi7g03639 861 MobiDBLite consensus disorder prediction 240 266 - -
Vivi7g03639 861 Pfam PLAT/LH2 domain 75 172 IPR001024 GO:0005515
Vivi7g03639 861 FunFam Lipoxygenase 496 860 - -
Vivi7g03639 861 Gene3D - 277 360 IPR027433 -
Vivi7g03639 861 ProSiteProfiles PLAT domain profile. 45 173 IPR001024 GO:0005515
Vivi7g03639 861 SUPERFAMILY Lipoxigenase 178 861 IPR036226 -
Vivi7g03639 861 Gene3D - 495 860 - -
Vivi7g03639 861 PRINTS Plant lipoxygenase signature 169 190 IPR001246 GO:0016491
Vivi7g03639 861 PRINTS Plant lipoxygenase signature 143 161 IPR001246 GO:0016491
Vivi7g03639 861 PRINTS Plant lipoxygenase signature 347 363 IPR001246 GO:0016491
Vivi7g03639 861 PRINTS Plant lipoxygenase signature 241 260 IPR001246 GO:0016491
Vivi7g03639 861 PRINTS Plant lipoxygenase signature 774 788 IPR001246 GO:0016491
Vivi7g03639 861 PRINTS Plant lipoxygenase signature 208 224 IPR001246 GO:0016491
Vivi7g03639 861 PRINTS Plant lipoxygenase signature 302 323 IPR001246 GO:0016491
Vivi7g03639 861 PRINTS Plant lipoxygenase signature 386 405 IPR001246 GO:0016491
Vivi7g03639 861 PRINTS Plant lipoxygenase signature 451 475 IPR001246 GO:0016491
Vivi7g03639 861 FunFam Lipoxygenase 361 493 - -
Vivi7g03639 861 SMART LH2_4 11 174 IPR001024 GO:0005515
Vivi7g03639 861 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 176 861 IPR013819 GO:0016702|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03639 Vivi-Chr7 102119182 102123157 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03639 1 861 Acyl Lipid Metabolism Gene Families AT1G55020 55.643 0.0 989
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03639 K15718 - gmx:547835 1339.71