Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03637 ATGGCTTCTCATTTACTCAATCACTCCAAAAAGTTAAGAAACGCTTCGAGCTTGTTACACCATGACCGTGCACTTTTGGTTCGTTGGTTTTGCAGCGATGTTCAACCCTTATCTATCAACAGAAATCGTGATATGTTGAAAACCCGAATACAAGATTACGAGTCTTCAGCGAGAAACAGTGTCTCTGAATCAGCCCCAAACTTTCCTAAACCTTCATTTGGTGTACAGAAGAGAAATATGTCCACCATGAATAGGGGTTATATGAGGTTGAATGGAGAGGTTTTACATTCACAGGTTCTGTCAAGGAGAAGCTATTCATCAGCTTCAGATCTCCCCCCACATCAGGAAATTGGAATGCCTTCTCTCTCGCCTACAATGACAGAGGGTAACATTGCAAGATGGTTGAAGAAAGAAGGGGATAAAGTTTCTCCTGGTGAAGTGCTCTGTGAAGTTGAAACTGATAAAGCTACTGTTGAAATGGAGTGCATGGAGGATGGTTTTCTGGCCAAAATAGTTCGTCAGGAGGGGGAAAAAGAAATTCAAGTTGGCGAGGTAATTGCCATCACTGTTGAAGAAGAGGGGGACATTGCAAAGTTTAAAGATTACAAACCTTCAGCATCTGAATCTAGTGAGCCCCCGGCCAAAGAAACACCTGCCCCACCTCCACCAAAGAAAGAAGTGGCAGAGGAGCCTGCCCGAGAACCTGAGCCAAAGGTTTCCAAGCCTAGTGCTCCGCCTTCATCCGGAGATCGAATATTTGCTAGTCCCCTTGCTAGAAAGTTGGCCGAAGAGAAAAATGTGACTCTCTCCAGCATTAAAGGAACAGGGCCTGATGGGCTCATTGTCAAGGGTGACATTGACGATTACTTGGCTTCTAGTGGTGTTAAAGAAGTTTCAGCACCCTCAAAGACCAAGGCTGCAACGGATGTGGCATTGGATTATACCGACATTCCTGTCTCTCAGATAAGAAAGATCACGGCTTCACGTTTGTTGCTATCAAAACAAACTATTCCTCATTACTATTTAACAGTAGATACTTGTGTTGACAAACTCATGAGTTTGCGTTCCCAACTCAATTCATTGCAGGAAGCCACTGGCGGTTCCCGCATATCAGTAAATGACCTTGTAATCAAGGCTGCTGCTTTGGCTCTCCGTAAAGTTCCTCAGTGTAACAGTTCATGGACAAATGACTATATTCGCCAGTTTCATAATGTGAATATTAATGTTGCCGTGCAGACTGAACATGGACTCTTTGTTCCGGTTGTTAGGGATGCGGACAAGAAAGGCCTCTCTAAAATAGGCGAAGAGGTCAAACAATTGGCTAAGAAAGCTAAAGAAAACAGCTTGAAACCCCAAGATTATGAGGGAGGTACATTTACAGTGTCTAACTTGGGAGGACCATTTGGAGTCAAACAGTTCTGTGCCATTGTCAATCCTCCTCAATCTGGCATTCTCGCTGTTGGATCTGCCGAGAGAAGGGTCGTTCCAGGTTCAGGTGCTGAAGAATTCAAATTTGCTTCCTTCATGGCCGTAACCCTCAGCTGCGATCATCGTGTAATAGATGGGGCAATTGGTGCTGAATGGCTAAAAGCATTCAAAGGCTATATTGAGAATCCAGAAACCATGTTGTTGTAA 1635 0.4416 MASHLLNHSKKLRNASSLLHHDRALLVRWFCSDVQPLSINRNRDMLKTRIQDYESSARNSVSESAPNFPKPSFGVQKRNMSTMNRGYMRLNGEVLHSQVLSRRSYSSASDLPPHQEIGMPSLSPTMTEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEDGFLAKIVRQEGEKEIQVGEVIAITVEEEGDIAKFKDYKPSASESSEPPAKETPAPPPPKKEVAEEPAREPEPKVSKPSAPPSSGDRIFASPLARKLAEEKNVTLSSIKGTGPDGLIVKGDIDDYLASSGVKEVSAPSKTKAATDVALDYTDIPVSQIRKITASRLLLSKQTIPHYYLTVDTCVDKLMSLRSQLNSLQEATGGSRISVNDLVIKAAALALRKVPQCNSSWTNDYIRQFHNVNINVAVQTEHGLFVPVVRDADKKGLSKIGEEVKQLAKKAKENSLKPQDYEGGTFTVSNLGGPFGVKQFCAIVNPPQSGILAVGSAERRVVPGSGAEEFKFASFMAVTLSCDHRVIDGAIGAEWLKAFKGYIENPETMLL 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03637 544 Gene3D - 247 295 IPR036625 GO:0016746
Vivi7g03637 544 Pfam Biotin-requiring enzyme 116 188 IPR000089 -
Vivi7g03637 544 ProSitePatterns 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 139 168 IPR003016 -
Vivi7g03637 544 MobiDBLite consensus disorder prediction 57 76 - -
Vivi7g03637 544 PANTHER DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED 86 544 IPR045257 GO:0006086|GO:0045254
Vivi7g03637 544 Gene3D - 109 215 - -
Vivi7g03637 544 MobiDBLite consensus disorder prediction 106 125 - -
Vivi7g03637 544 ProSiteProfiles Peripheral subunit-binding (PSBD) domain profile. 253 290 IPR004167 GO:0016746
Vivi7g03637 544 MobiDBLite consensus disorder prediction 222 237 - -
Vivi7g03637 544 NCBIfam pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase 116 544 IPR006257 GO:0004742|GO:0006090|GO:0045254
Vivi7g03637 544 CDD lipoyl_domain 115 188 - -
Vivi7g03637 544 SUPERFAMILY CoA-dependent acyltransferases 313 544 - -
Vivi7g03637 544 Pfam e3 binding domain 252 286 IPR004167 GO:0016746
Vivi7g03637 544 FunFam Acetyltransferase component of pyruvate dehydrogenase complex 110 214 - -
Vivi7g03637 544 SUPERFAMILY Single hybrid motif 113 208 IPR011053 -
Vivi7g03637 544 Pfam 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 313 544 IPR001078 GO:0016746
Vivi7g03637 544 ProSiteProfiles Biotinyl/lipoyl domain profile. 114 190 IPR000089 -
Vivi7g03637 544 SUPERFAMILY Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 246 291 IPR036625 GO:0016746
Vivi7g03637 544 Gene3D - 297 542 IPR023213 -
Vivi7g03637 544 FunFam Acetyltransferase component of pyruvate dehydrogenase complex 299 542 - -
Vivi7g03637 544 MobiDBLite consensus disorder prediction 202 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03637 Vivi-Chr7 102096523 102103106 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03637 2 544 Acyl Lipid Metabolism Gene Families AT1G54220 68.566 0.0 751
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03637 K00627 - gmx:100778218 843.188