Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03520 ATGGCTTCCCCGGCCAAACTCGATGAAGATCAGGTTCTGGTGGGACGTAAATCATCTGCCAGAGTTTTGACATTGAACAGGCCAAAACAATTAAATGCTCTCTCTTATTATATGGTATCTAAGCTATTGGAAATATTTCATGACGACGAGGGAAATCCTGATGTTAAATTGATTATCGTTAAGGGAAATGGAAGGGCATTTTGTGCTGGTGGTGATGTTGCAGCCGTTGCTCGTGATGCAAAAGGAGGTGATTGGAGGTTTGGTGCAAAGTTTTTTGACACTGAATATAAATTGAATTATTTGATGGCAACATATAGTAAGCCTCAGGTTTCAATTCTTAACGGAATTGTCATGGGAGGTGGCTCTGGTGCTTCTATGCATGGAAGATTTCGGGTTGTTACAGAGAAAACCGTCTTTGCAATGCCAGAAACAGCTTTGGGATTATTTCCTGATGTAGGCGCCGCATATTTCTTGTCTAGATTAGCTGGATTTTTTGGTGAATATGTTGGTCTTACAGGTGCTAGGTTGGATGGTGCAGAATTGCTTGCTTGTGGTCTTGCAACACATTTTGTCCCTTCATCGAAACTACCGTTATTGGAAGAATCATTATGCAAGGTGGAAACTAGTGATCCAGCTGTAGTATCTGCAATTATTGATAAGTACTCGGAGCAGGTTTCCTTAAAAGAGGATAGTGTTTATCACAGGATGGATGTAATCAATAAGTGTTTCTCTAGAAAATCAATGGAAGAAATTTTATCTTCTCTTGAGACCGAAGCTACGAGTAAGGCTGACAGTTGGATTTCTACAACCCTTGAAACTTTGAAGAAATCATCTCCAACAAGCCTTAAAGTCTTTCTTAGATTGATTAGAGAAGTCAGGCTTCTAGGTGTTGGTGATTGCCTTGTTCGCGAGTATAGAATTGTTTGTCATATCCTACAAGGACGCCACAGCAAAGATTTCTTCGAGGGTTGTAGAGCTATACTAATAGACAAAGACAGGAAGCCAAAGTGGGAACCTTCCAAATTGGAGCTTCTTAGTGACAGCGATGTGGACAAATACTTCTCTAAGCTTGATGCCGAATGGTGGAAAGATTTGGAACTTCCCAAAAGGTTCAAAAACTTGCCTGCACATGCTATTTCCAAGCTTTAA 1149 0.4056 MASPAKLDEDQVLVGRKSSARVLTLNRPKQLNALSYYMVSKLLEIFHDDEGNPDVKLIIVKGNGRAFCAGGDVAAVARDAKGGDWRFGAKFFDTEYKLNYLMATYSKPQVSILNGIVMGGGSGASMHGRFRVVTEKTVFAMPETALGLFPDVGAAYFLSRLAGFFGEYVGLTGARLDGAELLACGLATHFVPSSKLPLLEESLCKVETSDPAVVSAIIDKYSEQVSLKEDSVYHRMDVINKCFSRKSMEEILSSLETEATSKADSWISTTLETLKKSSPTSLKVFLRLIREVRLLGVGDCLVREYRIVCHILQGRHSKDFFEGCRAILIDKDRKPKWEPSKLELLSDSDVDKYFSKLDAEWWKDLELPKRFKNLPAHAISKL 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03520 382 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-RELATED 8 378 IPR032259 GO:0003860
Vivi7g03520 382 FunFam Probable 3-hydroxyisobutyryl-CoA hydrolase 2 6 371 - -
Vivi7g03520 382 CDD crotonase-like 12 196 - -
Vivi7g03520 382 Pfam Enoyl-CoA hydratase/isomerase 21 354 IPR045004 -
Vivi7g03520 382 SUPERFAMILY ClpP/crotonase 9 340 IPR029045 -
Vivi7g03520 382 Gene3D - 7 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03520 Vivi-Chr7 100840445 100847573 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03520 9 382 Miscellaneous Gene Families AT5G65940 66.043 0.0 532
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03520 K05605 - gmx:100170729 612.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g03520 7 100840445 100847573 Vivi7g03520 7 100840445 100847573 ECH