Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03518 ATGGAATTGGGATTAGGTTTTGATGAAAACGATTACTTATCATGCTGTGGAAGCACCCAATTCGCCAAAGAAATGGCTTCAGCTTCTCCTTTTCCTTCCTACCAACACGCTCTTTCTGTTGCCAGACACATTTGGTTCAACACCGTTGATGTTAATGGTTGGCTACAAGCTTTCTCTGCTCACCCTTCCATTGGTCAAACTCGTGCCCCTTCTCATGCTTCTCAAACCAGTGCCCAGTGGAGTAAGGGAGAACAATCAACTGCTTTAGCAACTGCTACTGGTTCTAGTTTACAGGAACTAGCTGAATGGAATGCTAGGTATATGCAAAAGTTTGGGTTTGTATTTCTTATATGTGCATCTGGGAGAAGTACTGAATCGATACTTGCTGAATTGAAGAAACGCTATACAAATAGACCAATTGTCGAATTTGAGATTGCAGCTCAGGAGCAAATGAAAATTACAGAACTGCGCTTGTCAAAGCTCTTTACAAGTAAAGGAAACATAATTTCTACAACTGATAAAAATTCCTCTCTCGCAACAAAAAAAGCAGAAGAAGAACGTGTAAGCATTATTGGTGGTCACGTGACTGCTGCTTCAGACACTTTAACTGCAAAATCGATCCAAAACCCGTCCAGAACCCGCCCACCTATTACCACTCATGTGTTGGATGTTTCGCGGGGCTCTCCAGCTTCAGGCATTGATGTACTTTTGGAGAAGTGGAACGGTAATCAAGCTCGTCCGATATTCGGTTACACGGATAGTGACGGATGGGTGGTTCAAGGGTCTTCGTCGACAGATTCAGACGGTCGTAGTGGTCAACTAATGAACATAGTTGATGATGTGGATCCAGGGATATACAGGATAAGTTTCAACACTGGAAAGTACAATCCGAACGGTTTCTTTCCATCCGTATCTATTGTGTTTGAAATCTTGGAGTCACAGACAAGGCAACATTTTCATGTTCCTCTATTGCTTTCGCCATTTTCCTTCAGCACTTACCGTGGAAGCTAG 1011 0.4293 MELGLGFDENDYLSCCGSTQFAKEMASASPFPSYQHALSVARHIWFNTVDVNGWLQAFSAHPSIGQTRAPSHASQTSAQWSKGEQSTALATATGSSLQELAEWNARYMQKFGFVFLICASGRSTESILAELKKRYTNRPIVEFEIAAQEQMKITELRLSKLFTSKGNIISTTDKNSSLATKKAEEERVSIIGGHVTAASDTLTAKSIQNPSRTRPPITTHVLDVSRGSPASGIDVLLEKWNGNQARPIFGYTDSDGWVVQGSSSTDSDGRSGQLMNIVDDVDPGIYRISFNTGKYNPNGFFPSVSIVFEILESQTRQHFHVPLLLSPFSFSTYRGS 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03518 336 FunFam Uric acid degradation bifunctional protein TTL 9 164 - -
Vivi7g03518 336 Pfam HIUase/Transthyretin family 217 335 IPR023416 -
Vivi7g03518 336 Gene3D - 8 165 IPR036778 -
Vivi7g03518 336 Pfam OHCU decarboxylase 14 158 IPR018020 -
Vivi7g03518 336 ProSitePatterns Transthyretin signature 2. 319 331 IPR023419 -
Vivi7g03518 336 CDD TLP_HIUase 215 336 IPR014306 GO:0006144|GO:0033971
Vivi7g03518 336 PANTHER 2-OXO-4-HYDROXY-4-CARBOXY-5-UREIDOIMIDAZOLINE DECARBOXYLASE-RELATED 4 243 - -
Vivi7g03518 336 FunFam Uric acid degradation bifunctional protein TTL 206 334 - -
Vivi7g03518 336 SUPERFAMILY Transthyretin (synonym: prealbumin) 209 336 IPR036817 -
Vivi7g03518 336 SUPERFAMILY UraD-Like 13 163 IPR036778 -
Vivi7g03518 336 Gene3D Transthyretin/hydroxyisourate hydrolase domain 206 334 IPR036817 -
Vivi7g03518 336 ProSitePatterns Transthyretin signature 1. 220 235 IPR023418 -
Vivi7g03518 336 NCBIfam hydroxyisourate hydrolase 216 336 IPR014306 GO:0006144|GO:0033971
Vivi7g03518 336 PRINTS Transthyretin signature 216 236 IPR000895 -
Vivi7g03518 336 PRINTS Transthyretin signature 314 336 IPR000895 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03518 Vivi-Chr7 100827469 100829753 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03518 K13484 - gmx:100788368 518.85