Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03517 ATGGAATTGGGATTAGGTTTTGATGAAAACGATTACTTATCATGCTGTGGAAGCACCCAATTCGCCAAAGAAATGGCTTCAGCTTCTCCTTTTCCTTCCTACCAACACGCTCTTTCTGTTGCCAGACACATTTGGTTCAACACCGTTGATGTTAATGGTTGGCTACAAGCTTTCTCTGCTCACCCTTCCATTGGTCAAACTCGTGCCCCTTCTCATGCTTCTCAAACCAGTGCCCAGTGGAGTAAGGGAGAACAATCAACTGCTTTAGCAACTGCTACTGGTTCTAGTTTACAGGAACTAGCTGAATGGAATGCTAGGTATATGCAAAAGTTTGGGTTTGTATTTCTTATATGTGCATCTGGGAGAAGTACTGAATCGATACTTGCTGAATTGAAGAAACGCTATACAAATAGACCAATTGTCGAATTTGAGATTGCAGCTCAGGAGCAAATGAAAATTACAGAACTGCGCTTGTCAAAGCTCTTTACAAGTAAAGGAAACATAATTTCTACAACTGATAAAAATTCCTCTCTCGCAACAAAAAAAGCAGAAGAACGTGTAAGCATTATTGGTGGTCACGTGACTGCTGCTTCAGACACTTTAACTGCAAAATCGATCCAAAACCCGTCCAGAACCCGCCCACCTATTACCACTCATGTGTTGGATGTTTCGCGGGGCTCTCCAGCTTCAGGCATTGATGTACTTTTGGAGAAGTGGAACGGTAATCAAGCTCGTCCGATATTCGGTTACACGGATAGTGACGGATGGGTGGTTCAAGGGTCTTCGTCGACAGATTCAGACGGTCGTAGTGGTCAACTAATGAACATAGTTGATGATGTGGATCCAGGGATATACAGGATAAGTTTCAACACTGGAAAGTACAATCCGAACGGTTTCTTTCCATCCGTATCTATTGTGTTTGAAATCTTGGAGTCACAGACAAGGCAACATTTTCATGTTCCTCTATTGCTTTCGCCATTTTCCTTCAGCACTTACCGTGGAAGCTAG 1008 0.4296 MELGLGFDENDYLSCCGSTQFAKEMASASPFPSYQHALSVARHIWFNTVDVNGWLQAFSAHPSIGQTRAPSHASQTSAQWSKGEQSTALATATGSSLQELAEWNARYMQKFGFVFLICASGRSTESILAELKKRYTNRPIVEFEIAAQEQMKITELRLSKLFTSKGNIISTTDKNSSLATKKAEERVSIIGGHVTAASDTLTAKSIQNPSRTRPPITTHVLDVSRGSPASGIDVLLEKWNGNQARPIFGYTDSDGWVVQGSSSTDSDGRSGQLMNIVDDVDPGIYRISFNTGKYNPNGFFPSVSIVFEILESQTRQHFHVPLLLSPFSFSTYRGS 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03517 335 ProSitePatterns Transthyretin signature 1. 219 234 IPR023418 -
Vivi7g03517 335 ProSitePatterns Transthyretin signature 2. 318 330 IPR023419 -
Vivi7g03517 335 Gene3D Transthyretin/hydroxyisourate hydrolase domain 205 333 IPR036817 -
Vivi7g03517 335 SUPERFAMILY Transthyretin (synonym: prealbumin) 208 335 IPR036817 -
Vivi7g03517 335 FunFam Uric acid degradation bifunctional protein TTL 9 164 - -
Vivi7g03517 335 NCBIfam hydroxyisourate hydrolase 215 335 IPR014306 GO:0006144|GO:0033971
Vivi7g03517 335 CDD TLP_HIUase 214 335 IPR014306 GO:0006144|GO:0033971
Vivi7g03517 335 Pfam HIUase/Transthyretin family 216 334 IPR023416 -
Vivi7g03517 335 PRINTS Transthyretin signature 215 235 IPR000895 -
Vivi7g03517 335 PRINTS Transthyretin signature 313 335 IPR000895 -
Vivi7g03517 335 FunFam Uric acid degradation bifunctional protein TTL 205 333 - -
Vivi7g03517 335 Pfam OHCU decarboxylase 14 158 IPR018020 -
Vivi7g03517 335 Gene3D - 8 165 IPR036778 -
Vivi7g03517 335 PANTHER 2-OXO-4-HYDROXY-4-CARBOXY-5-UREIDOIMIDAZOLINE DECARBOXYLASE-RELATED 4 246 - -
Vivi7g03517 335 SUPERFAMILY UraD-Like 13 163 IPR036778 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03517 Vivi-Chr7 100827469 100829753 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03517 K13484 - gmx:100788368 513.457