Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03508 ATGAAGGGTGAAGAAGGGGTGAAGACAACAACAACAACAACCTTGGAAGCTCCGAAGGATGTTGCAGCTGTTGATTATGTTGCTGCTGATGCTGTTGAAGAAATTGAAGAGCATGGAAATGACTCTTTAGCTGAAAAGGAAAATTCTCAGGTGGAAAAAGAGGTATCATATTATGAAGATGAAGAAAAAGAAGAAGAAGATGAAGATGAATCAGATGAAGAAAATGGAGATGCTGCTGATCTTGAAGGTCTATCTCTTGATGATGGCTTCTTTGAAGTTGAAGCTATTCAGCGCAAGAGATACCGCAAGGGAAAGTTGGAGTACTTTGTGAAATGGTCGGGATGGGATGAGTCAGCAAATACTTGGGAGCCTCGAGATAATTTGGTTGCTCTTCCTGAGATTGTTCGAGCTTTTGAGGAACGCTTGCAATCGACACCGCATCAGAAGCGCAAGCGAACGCAATCTAGTAATAGCGCTCCACTCAAGAAAAGGGTGGAGCGTTCCGCCACTCCTTATAGCCTTAGAGGCATAAAAACTGGTACAACTAGCACCAACCATTCAAAGGCGGCTGACAGTAATTCACAACCCGCCGCCCCTCTCAATGAGCAACCCAGTATTCTCGACACTCCTGCATTTCCTCAGACCGTGCTGTTTGCTGACGAAGTAGAAAATTACGGTGAAGGAAGCGGTCTTGAAAAAGTCAATCAGGCTAATGATGATATGTCTGTGGATCCTCCAGAAGATGTTCCTCGAAAGAATGAGGAAAACGAGTCTGATCCTAAGCTTACTCCAAACATCGAAGAAAACAAGTCGGATCCTAAGCTTACTCCAAACATTGAAGAAAACAAGTCTGATCCTGAGCTTACTCCAAACATCGAGGAAAACAAGTCTGGTCCTAAGCTTACTCGAAAAATTGAAGAAAAGAAGTCTGGTCCTAAGCTTACTCGAAAAATTGAAGAAAAGAAATCTGGTCCTAAGCTTACTCGAAAAAATAAGGCAAGCAAATCTGATCCTAAGCCTACCCCAAACAATGAAGAAAACAAGTCGGGTCCTAGGCTTACTCGAAAAAATAAGACAAAGAAATCTGATCCTAAGCCTACTCCAAACACTGAAGAAAACAAGTCAGGTCCTAGGCTTACTCGAAAAAATAAGGCAAATAAATCGGATCCTAAGCTTACTCCAAACATTGAAGAAAACAAGTCGGGTCCTAGGCTTACTCGAAAAAACAAGGCAAATAAGTCTGATTCTAAGCTTACTCCAAAAATTGAAGAAAACAAGTCGGGTCTTAGGCTTACTCGAAAAAATAAGGCAAATAAGTCCGATTCTAAGCTTACTCCAAAAATTGAAGAAAAAAAGTTGGGTCCTAGGCTTACTCGAAAAAATAAGGCAAACAAGTCGGGTCCTAAGCTTACTCCAAACATTGAAAAAAAAGTGTCTGATCCTAAGCATACTCCAAACATTGAAGAAAAAGAGTGGGATCCTAAGGTTACTCGAAAGGAAAACAAGTCTGATTCAAAGCTTACTCCAAATGTCGAAGAAAACAATTCTGATCCTAAGCTTACTCCAAACATTGAAGAAAACGAGTCTGATCCTAAGCTTATTCCAAACAAGGAGGAAAACAAGGTTGATCCTAAGCTTACTTCAAAGATTGAAGAAAACAAGTATGATCCTAAGATAACTCCAAACAAGGAGGGAAACAAGTCTGATCCTAAGCTTAGCGAACATAAAGCTACAGCAACCAATGAAAATGACGCTAACAACCTCGCTATACAGTTTGAAGAAGCTGTGACTCCTCCTATAAAACCTCACATGACTGAGCAGCCAACTGCGGTTTTCACAGAAGGGATTACCAAACAAAGTGCAGGTAGCGCAGAACCGGTTCAAACTGGCTCCGGACGGTTAGGAACCAGACGGAGAAAAACTACTGCGAAGAGGTTCACCGGATCTTCAATTGCTCGTAAGCCCGATGGTACAGCTGAACCAGCACAAACAGGAGCTACTGATATTGCGGCTCCTAGTAGTCACACAGCGACAGAACCTGTGAAACCAGGGCCTGACATTGTTGAGATTGTGAAGCCGGTAGGCTATTCTGCTGCAGAAGCCAGCACCAAGCAGGAAGCTTCGGTGACCTTCAAGGTTAAAAGAGAAAAATAG 2154 0.4234 MKGEEGVKTTTTTTLEAPKDVAAVDYVAADAVEEIEEHGNDSLAEKENSQVEKEVSYYEDEEKEEEDEDESDEENGDAADLEGLSLDDGFFEVEAIQRKRYRKGKLEYFVKWSGWDESANTWEPRDNLVALPEIVRAFEERLQSTPHQKRKRTQSSNSAPLKKRVERSATPYSLRGIKTGTTSTNHSKAADSNSQPAAPLNEQPSILDTPAFPQTVLFADEVENYGEGSGLEKVNQANDDMSVDPPEDVPRKNEENESDPKLTPNIEENKSDPKLTPNIEENKSDPELTPNIEENKSGPKLTRKIEEKKSGPKLTRKIEEKKSGPKLTRKNKASKSDPKPTPNNEENKSGPRLTRKNKTKKSDPKPTPNTEENKSGPRLTRKNKANKSDPKLTPNIEENKSGPRLTRKNKANKSDSKLTPKIEENKSGLRLTRKNKANKSDSKLTPKIEEKKLGPRLTRKNKANKSGPKLTPNIEKKVSDPKHTPNIEEKEWDPKVTRKENKSDSKLTPNVEENNSDPKLTPNIEENESDPKLIPNKEENKVDPKLTSKIEENKYDPKITPNKEGNKSDPKLSEHKATATNENDANNLAIQFEEAVTPPIKPHMTEQPTAVFTEGITKQSAGSAEPVQTGSGRLGTRRRKTTAKRFTGSSIARKPDGTAEPAQTGATDIAAPSSHTATEPVKPGPDIVEIVKPVGYSAAEASTKQEASVTFKVKREK 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03508 717 MobiDBLite consensus disorder prediction 1 20 - -
Vivi7g03508 717 Gene3D - 42 147 - -
Vivi7g03508 717 MobiDBLite consensus disorder prediction 401 457 - -
Vivi7g03508 717 Coils Coil 48 68 - -
Vivi7g03508 717 SUPERFAMILY Chromo domain-like 85 147 IPR016197 -
Vivi7g03508 717 ProSitePatterns Chromo domain signature. 108 128 IPR023779 -
Vivi7g03508 717 MobiDBLite consensus disorder prediction 244 290 - -
Vivi7g03508 717 MobiDBLite consensus disorder prediction 37 57 - -
Vivi7g03508 717 Pfam Chromo (CHRromatin Organisation MOdifier) domain 91 141 IPR023780 -
Vivi7g03508 717 MobiDBLite consensus disorder prediction 617 636 - -
Vivi7g03508 717 MobiDBLite consensus disorder prediction 508 522 - -
Vivi7g03508 717 MobiDBLite consensus disorder prediction 174 210 - -
Vivi7g03508 717 MobiDBLite consensus disorder prediction 375 394 - -
Vivi7g03508 717 ProSiteProfiles Chromo and chromo shadow domain profile. 91 150 IPR000953 -
Vivi7g03508 717 MobiDBLite consensus disorder prediction 1 17 - -
Vivi7g03508 717 MobiDBLite consensus disorder prediction 523 578 - -
Vivi7g03508 717 MobiDBLite consensus disorder prediction 617 686 - -
Vivi7g03508 717 MobiDBLite consensus disorder prediction 149 163 - -
Vivi7g03508 717 MobiDBLite consensus disorder prediction 140 584 - -
Vivi7g03508 717 SMART chromo_7 90 143 IPR000953 -
Vivi7g03508 717 MobiDBLite consensus disorder prediction 37 84 - -
Vivi7g03508 717 MobiDBLite consensus disorder prediction 475 507 - -
Vivi7g03508 717 MobiDBLite consensus disorder prediction 58 81 - -
Vivi7g03508 717 MobiDBLite consensus disorder prediction 349 368 - -
Vivi7g03508 717 CDD CD_CSD 91 140 - -
Vivi7g03508 717 MobiDBLite consensus disorder prediction 297 342 - -
Vivi7g03508 717 PANTHER CHROMO DOMAIN-CONTAINING PROTEIN LHP1 452 715 IPR044251 GO:0006325|GO:0031507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03508 Vivi-Chr7 100768097 100771633 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03508 - - vvo:131619836 1211.82