Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03490 ATGGAAGAAAAAGATTCAGTTGCTAAAATGATGGACTCTACATCTTCAAAGATACAACAGCTGCAAAAGGCTTTTGCTGAACTTGAAAGTTACCGAGCTGTTACTCTTAACTTGAAATGGAAAGAATTAGAGGAACATTTTCATGGGCTGGAGAAATCCTTGAAGAGGCGCTTTCGTGAACTCGAAGACCAAGAAAAAGTATTTGAAAACAAAACAAGGAAAGCTCGTGAAATTTTGGAGAAACAGGAAGCGGCTGCTTTTGCCAAGGAGCAAGCCTCGCTGCAGAGTCTTCAAGAGAAAAGAGATGTTGCTGTATTCACCATTGTAAATGCCCGAGAAAAATACAGAAAGGTTTCATCAAAGGATTTGGGTATTGTCTTTAATGGGACTCAAGGCTCACCAGGTGTCGAGGAGAAACCTGGGGATGCTGTATCCACTGGGGGTGAAGCTAACTTAGAAAGTGTGAAACATTCTCTTGAAAATGGAAATGTGGACATGATGTCTTATCCAGAGTTGGTAAAACTATGCAAAGAGGTAGATTCCGCTGGACTTCACAAATTTATATCCGACAATCGCAAGAACCTTGCTGCTGTAAGGGAGGAAATACCACTTGCATTAAGAGCTGCTCCTAATGCTGCCCGTCTAGTTTTAGATTCTTTGGAAGGGTTTTATTCTCCCGAAGTGTCAAATCAAGATATAAAGAAGGATGCTAACTTGTTGGGTCTTCGCCGAACCAGTATCATGCTGTTGGAATGTCTAAGTGATTTCCTAACCGATTTGGGTTCTGATTCTAATGTGGTTTCTGAAGATATCAAGGATAGGGCAAAGGCAGTTGCTGAAGAGTGGAAACCAAGATTGGATACCCTTGACATTGATGCTAGCAATGGGAATTCCTTGGAGGCTCATGCTTTTTTGCAACTTCTAGCAAGTTTTGGTATTGCCTCTGATTTTAACGAGGAGGAGTTATCCAGGCTAATTCCAATGGTATCTCGGCGTCGCCAAACTGCTGATTTATGCCGGTGCCTTGGGTTGTCAGAGAAGATGCCTGGTGTGATTGAAGTTTTAATAAACTGTGGGCGGCAAATTGATGCTGTTAACTTGGCTTTTGCATTTGATCTTACAGAACAATTTTCACCTATTCCTTTGCTGAAGTCTTATCTGAACGATGCTAAGAAAACTTCTACTCCAGTCAAGAGCGTAAACTCATCTTCCACCGCACAGATTGAGGTTAATGAAAGAGAGCTGTTTGCTCTTAAGGCCGTAATCAAGTGCATTGAAGAACATAAGCTTGATGAGCAGTATCCTATGGATCCTCTCCAGAAACAAGTGATCCAACTAGAGAGGGCCAAGGCCGACAAGAAGCGAGAAACTGAAGTAACAAAACCTCAACCAAAGAGGCCTCGCGCTAATGGTGTCGGATATGGTCCTCGAGTCACTAACGTTCCTTCCGAGAAAACCTCCTATGCTAGAGTTGCTGACAGGTACCCTCAATATGTGTATAACCAACCTTATATGTACCCTGGCCCAACTGAAAATCACTGCACCCCTTTCCTGAGTTCGGCAACCTATAACGTCTCTCCTAATCCTGGAAATTACTTCGGAAATGGTTATCAGTATCAAGCTACATATCTCCACTAA 1638 0.4255 MEEKDSVAKMMDSTSSKIQQLQKAFAELESYRAVTLNLKWKELEEHFHGLEKSLKRRFRELEDQEKVFENKTRKAREILEKQEAAAFAKEQASLQSLQEKRDVAVFTIVNAREKYRKVSSKDLGIVFNGTQGSPGVEEKPGDAVSTGGEANLESVKHSLENGNVDMMSYPELVKLCKEVDSAGLHKFISDNRKNLAAVREEIPLALRAAPNAARLVLDSLEGFYSPEVSNQDIKKDANLLGLRRTSIMLLECLSDFLTDLGSDSNVVSEDIKDRAKAVAEEWKPRLDTLDIDASNGNSLEAHAFLQLLASFGIASDFNEEELSRLIPMVSRRRQTADLCRCLGLSEKMPGVIEVLINCGRQIDAVNLAFAFDLTEQFSPIPLLKSYLNDAKKTSTPVKSVNSSSTAQIEVNERELFALKAVIKCIEEHKLDEQYPMDPLQKQVIQLERAKADKKRETEVTKPQPKRPRANGVGYGPRVTNVPSEKTSYARVADRYPQYVYNQPYMYPGPTENHCTPFLSSATYNVSPNPGNYFGNGYQYQATYLH 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03490 545 Coils Coil 436 456 - -
Vivi7g03490 545 Pfam Frigida-like protein 168 457 IPR012474 -
Vivi7g03490 545 Coils Coil 51 81 - -
Vivi7g03490 545 PANTHER FRIGIDA-LIKE PROTEIN 3-RELATED 14 470 - -
Vivi7g03490 545 MobiDBLite consensus disorder prediction 450 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03490 Vivi-Chr7 100620659 100625295 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03490 - - gmx:100806993 879.011