Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03454 ATGGGTTGTTGTTGTGGTTGGAGAAAGTTGTATGGCATTGGTACTTCACTTTCTGCACCAATGTTACCACTCTCACTCTCACCCTTTCGTCCTCTCTCTTCTTCTCTTCCATTCTCTTCTTCTTCTTCCTCATCCATTTCCCCACTAGTACAAGACCTACAACAACAACAACAACTAAAACCGCAATTACGAAGCTCACAGCTCGTCGCATTAGAATACGCTGACCTCAACCTCTCCAACAATTTGGAACAGGGTCATGTCAGAATCAGGCAACATGTTAATCCCCTCAGTTCTTCTTTCGCTACTCCTGCACAAGTACCAGACTGGAACCAGGTTTTTGCAGACCCTGCATTGCCACTCATGGTAGATATTGGATGTGGCAGTGGCAGGTTTCTTATGTGGCTTGCAAAAAGGACACCTAAAGTGAGAAATTATTTGGGATTGGAAATACGGCAAAGGATGGTCAAGCGTGCTGAGTTATGGGTAAAAGACCTGGCTCTAGATAACATACATTTCTTGTTTGCAAATGCTCCAATTTCTTTCAAGCAATTGGTAGAATCATATCCCGGGCCCTTACAGTTAGTTTCAATTTTGTGTCCAGACCCTCATTTCAAGAAAAAACATCATAAAAGAAGAGTTCTGCAGAAGCCTTTGGTTGGTGCTATTGTAGATAATTTAACTCCTGGAGGACAGGTGTTCATACAGTCTGACGTGGTTGAAGTGGCACTTGACATGAAAAACCAGTTCGATGAAGTTGATGCACTAAGTCACATAGATACTTTGAACCCTGCTATACCGTGTGATAGTGATGGATGGTTATTAAGCAACCCTATGGGAATTAGGACTGAGAGAGAGATTCATGCAGAATTTGAAGGAGCAAAAATCTATCGAAGGTTGTACGAGAAGAAGCAGATATGA 918 0.4237 MGCCCGWRKLYGIGTSLSAPMLPLSLSPFRPLSSSLPFSSSSSSSISPLVQDLQQQQQLKPQLRSSQLVALEYADLNLSNNLEQGHVRIRQHVNPLSSSFATPAQVPDWNQVFADPALPLMVDIGCGSGRFLMWLAKRTPKVRNYLGLEIRQRMVKRAELWVKDLALDNIHFLFANAPISFKQLVESYPGPLQLVSILCPDPHFKKKHHKRRVLQKPLVGAIVDNLTPGGQVFIQSDVVEVALDMKNQFDEVDALSHIDTLNPAIPCDSDGWLLSNPMGIRTEREIHAEFEGAKIYRRLYEKKQI 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03454 305 CDD AdoMet_MTases 122 235 - -
Vivi7g03454 305 Gene3D Vaccinia Virus protein VP39 87 304 IPR029063 -
Vivi7g03454 305 PANTHER 3-DEOXY-D-MANNO-OCTULOSONIC-ACID TRANSFERASE/TRNA GUANINE-N 7 - -METHYLTRANSFERASE 62 302 IPR003358 GO:0006400|GO:0008176
Vivi7g03454 305 Pfam Putative methyltransferase 119 296 IPR003358 GO:0006400|GO:0008176
Vivi7g03454 305 NCBIfam tRNA (guanosine(46)-N7)-methyltransferase TrmB 105 260 IPR003358 GO:0006400|GO:0008176
Vivi7g03454 305 FunFam tRNA (Guanine-N(7)-)-methyltransferase 88 305 - -
Vivi7g03454 305 ProSiteProfiles SAM-dependent methyltransferase TRMB-type domain profile. 77 302 IPR003358 GO:0006400|GO:0008176
Vivi7g03454 305 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 116 287 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03454 Vivi-Chr7 100225454 100228529 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03454 K03439 - gmx:100788255 425.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g03454 7 100225454 100228529 Vivi7g03454 7 100225454 100228529 ECH