Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03450 ATGTCCACTCTACTTCAATCCTCTTTCATTTCTCCGATCACTCCCCGTCTCGCTCGCGTCTCCCTCCGTAACGCCGTCAGATGCAATAATGCCGTAGCCTCTTTGAACTCGGCGAACGGAATTCCATATCGTTCCGCTGAACTTTCAGCTAACGGTTCAACTTCCATTCCGAGTTTTCTCGTGGCGCCTAACACTCGCATCCATGATCTCGTTAACAGAAATCGTCTTCGCATATTCTCCGGTACCGCCAATCCCGCACTCGCTCAGGAAATTGCATGCTATATGGGCCTGGATTTGGGGAAAATTAAGATAAAGCGTTTTGCTGATGGTGAAATATATGTCCAACTGCAAGAGAGTGTCAGAGGGTGTGATGTGTTTCTTGTGCAGCCCACATGTCCCCCTGCGAATGAGAATCTTATGGAGCTTCTAGTAATGATTGATGCCTGTAGAAGAGCTTCAGCTAAAAATATTACTGCAGTCATTCCTTATTTTGGATATGCTAGAGCTGATAGAAAGACTCAAGGGCGTGAATCAATTGCTGCTAAGCTTGTAGCAAATTTAATTACAGAAGCAGGTGCAAATCGTGTTCTTGCATGTGACCTCCATTCTGGGCAGTCTATGGGCTACTTCGATATTCCAGTTGATCATGTGTATGGACAGCCTGTTATACTCGATTACCTTGCTAGCAAGACTATTTGTTCAGATGATTTGGTAGTTGTCTCGCCCGATGTTGGTGGTGTAGCTAGAGCACGTGCTTTTGCCAAAAAGTTATCTGATGCTCCTTTAGCTATTGTTGATAAAAGGCGTCATGGGCATAATGTTGCCGAGGTGATGAATTTGATAGGTGATGTAAAGGGAAAGGTAGCAGTTATGGTAGATGACATGATTGATACTGCTGGGACCATCGCCAAAGGCGCAGCTCTGTTGCATCAAGAAGGGGCAAGAGAAGTCTATGCATGCACTACACATGCTGTTTTCAGTCCTCCTGCTATAGAGAGATTGTCAAGCGGTTTATTTCAAGAAGTTATCATAACTAATACAATTCCAGTTTCCGAGAAGAACTATTTCCCCCAATTAACTGTCTTATCAGTGGCAAACCTTCTGGGCGAGACTATATGGCGTGTTCATGATGACTGCTCACTGATGACACTGCAGTAA 1158 0.4465 MSTLLQSSFISPITPRLARVSLRNAVRCNNAVASLNSANGIPYRSAELSANGSTSIPSFLVAPNTRIHDLVNRNRLRIFSGTANPALAQEIACYMGLDLGKIKIKRFADGEIYVQLQESVRGCDVFLVQPTCPPANENLMELLVMIDACRRASAKNITAVIPYFGYARADRKTQGRESIAAKLVANLITEAGANRVLACDLHSGQSMGYFDIPVDHVYGQPVILDYLASKTICSDDLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRHGHNVAEVMNLIGDVKGKVAVMVDDMIDTAGTIAKGAALLHQEGAREVYACTTHAVFSPPAIERLSSGLFQEVIITNTIPVSEKNYFPQLTVLSVANLLGETIWRVHDDCSLMTLQ 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03450 385 CDD PRTases_typeI 235 347 IPR000836 -
Vivi7g03450 385 PANTHER RIBOSE-PHOSPHATE DIPHOSPHOKINASE FAMILY MEMBER 75 384 IPR005946 GO:0000287|GO:0004749|GO:0009165
Vivi7g03450 385 Pfam Phosphoribosyl synthetase-associated domain 277 382 IPR005946 GO:0000287|GO:0004749|GO:0009165
Vivi7g03450 385 SUPERFAMILY PRTase-like 141 377 IPR029057 -
Vivi7g03450 385 ProSitePatterns Phosphoribosyl pyrophosphate synthase signature. 200 215 IPR000842 GO:0000287|GO:0004749|GO:0009156|GO:0044249
Vivi7g03450 385 SMART Pribosyltran_N_2 76 192 - -
Vivi7g03450 385 Gene3D - 219 362 IPR029057 -
Vivi7g03450 385 FunFam Ribose-phosphate pyrophosphokinase 79 231 - -
Vivi7g03450 385 Pfam N-terminal domain of ribose phosphate pyrophosphokinase 76 192 IPR029099 -
Vivi7g03450 385 Gene3D - 79 377 IPR029057 -
Vivi7g03450 385 Hamap Putative ribose-phosphate pyrophosphokinase [prs]. 76 385 IPR037515 GO:0004749
Vivi7g03450 385 NCBIfam ribose-phosphate diphosphokinase 77 384 IPR005946 GO:0000287|GO:0004749|GO:0009165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03450 Vivi-Chr7 100205166 100210458 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03450 K00948 - gmx:100789585 651.358