Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03443 ATGTTGCCTATAAATAGTGTCATATGTATGTTATTCAAAACACAAAGAAAAACAACACTTGTGTGTTTTTCTAAAGAAAATCATAGTATGGCTTCAAGACCAGGAATCCTCACTGATTGGCCATGGAAGCCTCTTGGAAGCTTTAAGTATGTGGTATTAGTTCCTTGGGTGATTCACAGTTCTTATTCATTGTTGGTGAAGGATAAAAATGAAAGGGATGTATCAACCTTTCTCGTGTTCCCATTTTTGCTATGGAGGGTTCTTCATAATCAAATATGGATCACTCTTTCTCGTTATCGAACAGCTAAAGGAAATAATAGAATTGTTGACAAAGGAATTGAGTTTGATCAAGTTGATAGAGAAAAAGAATGGGATGACCAAATATTGTTCAATGGATTGCTATATTATTTGGCATGCTATACCTTAGAAGGAGCATCACGTCTTCCACTATGGAGAACTGATGGAGTAATTATTGCAGCATTGCTTCATACTGGACCAGTGGAGTTTCTATACTATTGGTTACATAGAGCACTTCATCATCACTTTCTTTACTCTAGATATCATTCTCATCATCATTCTTCCATTGTTACAGAACCAATAACTTCTGTCATCCATCCATTTGCCGAACACATATCATATTTCCTTCTATTTGCAATACCCAAATTGACCCTGGTCTTCTCAAACAAAGCTTCCATTGTAGCCATGGTTGGATATGTCACTTACATTGATTTCATGAACAATTTAGGTCATTGCAACTTTGAAGTTGTTCCTAAATGGCTCTTTGATATCTTTCCCCCTCTCAAGTATTTCATGTACACTCCATCGTTTCACTCTTTGCACCATACTCAATTTAGAACAAACTACTCACTTTTCATGCCACTTTATGACTACATTTATGGGACAATGGACAAGACCTCTGATGAAGTACATGAGTTGGCATTAAAAAGAAAGGAAGAGACACCAAATGTTGTCCACTTAACACATTTAACAACCCCTGAATCCATTTATCATCTAAGATTTGGATTTGCTCACTTAGCTTCTAAGCCATACACATCAAAATGGTATCTTTGGTTGATGTGGCCTCTTACAGCTTGGTCCATGTTACTCACATGGGTTTACGGTAGAACATTCATTGTTGAAAGAAACCGTTTTGATGATAAACTTAACCTTCAAACTTGGGCAATTCCTAAGTACAGTGTTCAGTACTTGCTTCAATGGCAAAAAGTTACCATCAACAAAATGATTGAGGATGCAATACTAGATGCTGACAAAAAGGGCATAGAAGTGTTGAGCTTAGGTCTAATGAATCAAGGGGAAGAACTTAACATCTATGGAGGATTATATGTTAATAGACATCCTAAACTTAATGTTAAGGTTGTTGATGGTAGTAGCCTAGTTGTTGCTACTGTCCTTAATAGCATTCCAAAAGGAACAACTCAAGTATTGCTAAGAGGAAAATTCACCAAAGTTGCTTATGCTATTGCCTTCACATTGTGCCAACAAGGAGTTCAGGTAACTACAATGCATGAGGATGATTATGTGAAGCTCAAAAAGTCATTGATCAATACCTCTGAAATTACAAATTTGGTCAACACAAAAAGTTGCACTCAAATGGTTTGGTTAGTGGGAGATGGATTAACTGAAGAAGAACAGATGAAAGCACCAAAAGGAACATTATTTATTCCATATTCACCATTCCCACCAAAGAAACATCGTAAAGATTGTTCATACCATTGCACTCCAGCAATGCTAACTCCCAAATCTATTGAAAATGTCCATTCTTGTGAGGATTGGTTGCCAAGGAGGGTAATGAGTGCATGGCGTATTGCTGGGATAGTGCACTCATTAGAAGGGTGGAGTGAACATGAATGTGGCTACAAAATGAATAACATTGACAAAGTTTGGAACTCAGCTCTTAAACATGGATTCCAACCTCTGAATGCTTCATTCAAAAAGTTAGATCATTATAATTAA 1974 0.3673 MLPINSVICMLFKTQRKTTLVCFSKENHSMASRPGILTDWPWKPLGSFKYVVLVPWVIHSSYSLLVKDKNERDVSTFLVFPFLLWRVLHNQIWITLSRYRTAKGNNRIVDKGIEFDQVDREKEWDDQILFNGLLYYLACYTLEGASRLPLWRTDGVIIAALLHTGPVEFLYYWLHRALHHHFLYSRYHSHHHSSIVTEPITSVIHPFAEHISYFLLFAIPKLTLVFSNKASIVAMVGYVTYIDFMNNLGHCNFEVVPKWLFDIFPPLKYFMYTPSFHSLHHTQFRTNYSLFMPLYDYIYGTMDKTSDEVHELALKRKEETPNVVHLTHLTTPESIYHLRFGFAHLASKPYTSKWYLWLMWPLTAWSMLLTWVYGRTFIVERNRFDDKLNLQTWAIPKYSVQYLLQWQKVTINKMIEDAILDADKKGIEVLSLGLMNQGEELNIYGGLYVNRHPKLNVKVVDGSSLVVATVLNSIPKGTTQVLLRGKFTKVAYAIAFTLCQQGVQVTTMHEDDYVKLKKSLINTSEITNLVNTKSCTQMVWLVGDGLTEEEQMKAPKGTLFIPYSPFPPKKHRKDCSYHCTPAMLTPKSIENVHSCEDWLPRRVMSAWRIAGIVHSLEGWSEHECGYKMNNIDKVWNSALKHGFQPLNASFKKLDHYN 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03443 657 PANTHER STEROL DESATURASE 41 645 - -
Vivi7g03443 657 Pfam WAX2 C-terminal domain 481 645 IPR021940 -
Vivi7g03443 657 Pfam Fatty acid hydroxylase 167 301 IPR006694 GO:0005506|GO:0008610|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03443 Vivi-Chr7 100116312 100123482 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03443 30 649 Lipid Metabolism Gene Families AT1G02190 57.895 0.0 729
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03443 K15404 - gmx:100818020 1090.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g03443 7 100116312 100123482 Vivi7g03443 7 100116312 100123482 ECH