Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03440 ATGGGGACAGTTCTTGAAGCTGCAATCAAGGATAATCTTGGAAGCCTCCTAAATAAAAACCCTACAGTTGTGTTTGTGCTAGGTGGCCCAGGCAGTGGAAAGGGTACCCAATGTGCAAACCTTGTTGAACATTTTGGGTTTACTCATCTCAGTGCTGGTGATCTTCTGCGTGCGGAAATAAAATCTGGCTCTGAAAATGGCACAATGATCCAGAATATGATTAAAGAAGGAAAGATTGTTCCATCTGAGGTAACAATTAAGCTTCTGCAACGAGCAATGCAGGAAAATGGCAATGACAAATTTCTTATTGATGGTTTTCCTCGCAATGAGGAAAACCGTGCAGCCTTTGAGAAAGTGACAGGAATAGAGCCAACATTTGTCCTATACTTTGATTGTCCTGAGGAAGAGATGGAGAGACGACTTCTTAGTAGGAACCAGGGTAGAGAAGATGACAACATTGAAACAATAAGGAAGCGATTCAAGGTTTTCTTGGAGTCTAGTCTCCCTGTTATTAATTATTATGATGCTAAGGGAAAAGTCCGCAAGATTGATGCTGCAAGGCCTGTGGAAGAGGTATTTGATTCAGTCAAAGCAATTTTTGGTCCAAAAAATGAGAAGGCTGATTGA 627 0.4131 MGTVLEAAIKDNLGSLLNKNPTVVFVLGGPGSGKGTQCANLVEHFGFTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQRAMQENGNDKFLIDGFPRNEENRAAFEKVTGIEPTFVLYFDCPEEEMERRLLSRNQGREDDNIETIRKRFKVFLESSLPVINYYDAKGKVRKIDAARPVEEVFDSVKAIFGPKNEKAD 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03440 208 Gene3D - 10 200 IPR027417 -
Vivi7g03440 208 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 19 200 IPR027417 -
Vivi7g03440 208 Hamap UMP-CMP kinase [CMPK1]. 21 203 IPR006266 GO:0004127|GO:0006207|GO:0006221|GO:0009041
Vivi7g03440 208 PRINTS Adenylate kinase signature 53 67 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vivi7g03440 208 PRINTS Adenylate kinase signature 148 163 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vivi7g03440 208 PRINTS Adenylate kinase signature 165 179 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vivi7g03440 208 PRINTS Adenylate kinase signature 25 38 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vivi7g03440 208 PRINTS Adenylate kinase signature 101 117 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vivi7g03440 208 ProSitePatterns Adenylate kinase signature. 101 112 IPR033690 -
Vivi7g03440 208 PANTHER NUCLEOTIDE KINASE 18 197 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vivi7g03440 208 Hamap Adenylate kinase [adk]. 22 201 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vivi7g03440 208 NCBIfam UMP-CMP kinase family 23 200 IPR006266 GO:0004127|GO:0006207|GO:0006221|GO:0009041
Vivi7g03440 208 CDD ADK 23 192 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vivi7g03440 208 FunFam Adenylate kinase 1 16 203 - -
Vivi7g03440 208 Pfam Adenylate kinase 26 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03440 Vivi-Chr7 100062192 100069697 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03440 K13800 - gmx:100500111 380.563