Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03438 ATGACGACTATGGAGAGCTTAATCGGATTGGTTAACAGAATCCAGCAAGCTTGTACTAAGCTTGGCGATTATGGCGGTTCTGACAACAACACGTTTTCATCTCTCTGGGAAGCTCTTCCTTCCGTCGCCGTCGTTGGTGGCCAGAGTTCTGGTAAGTCTTCGGTTTTGGAAAGTATCGTTGGACGTGACTTTCTACCTAGAGGATCAGGGATTGTGACGAGGCGTCCATTGGTATTGCAGCTTCATAAGATAGAAGATGATGAAAGGGAGTATGCTGAGTTTCTTCACAGACAAGGGAGAAAGATAACCGATTTTGCTGTAGTACGCCAAGAAATTCAGGACGAAACTGATAGGGTTACGGGAAAGACAAAGCAAATATCTCCTATTCCAATTCATCTTAGCATTTATTCTCCAAAGGTTGTCAACCTAACTTTGATTGATTTGCCGGGGTTGACTAAAGTTGCCGTAGATGGACAGCCTGAGAGTACTGTTGAAGATATTGAAACTATGGTTCGATCTTATGTTGAGAAGCCTAATTGTATCATACTGGCTATATCTCCAGCCAACCAGGACATAGCAACTTCTGATGCTATCAAACTTGCCAGGGAAGTGGATCCCACAGGTGAAAGGACATTTGGAGTATTGACAAAGCTGGATTTGATGGACAAAGGAACTAATGCATTGGATGTCCTTGAAGGAAGATCTTATCGTCTACAACATCCTTGGGTTGGTATAGTAAATCGATCTCAAGCAGATATCAACAAAAATGTTGATATGATTATTGCCAGACGTAAGGAGGTTGAGTATTTTGAAACCAGTCCTGACTATGGCCACTTAGCCAGTAAAATGGGTTCAGTATACCTTGCAAAACTTCTTTCACAGCACTTGGAGTCAGTTATTAGGGCACGTATACCTAGTATAACATCTTTGGTAAACAAAAGCATTGAAGAACTTGAATCAGAGATGGACCATCTTGGGAGACCAATTGCTGTTGATGCGGGGGCTCAACTATACACCATCCTCGAACTTTGCCGCAAGTTTGAACGGATATTCAAAGAGCACTTAGATGGAGGGCGGCCAGGAGGAGATAGGATATACAATGTCTTTGATAATCAGCTTCCTGCTGCTTTACGAAAGCTTCCGATTGACAAACATCTTTCTCTTCAGAATGTGAAGAGAGTGGTGTCAGAGGCGGATGGTTACCAGCCACATTTAATTGCCCCAGAGCAAGGTTACCGACGACTAATTGAGGGGGCTCTCAGTTACTTTAGAGGCCCAGCCGAAGCTTCAGTTGATGCAGTTCACTTTGTCTTAAAAGAACTTGTGAGAAAATCAATAGGTGAAACTGAGGAATTGAGACGATTCCCTACTCTTCAAGCTGAATTATCTGCAGCTACAAATGAGGCTCTAGAGAGATTTCGTGAAGCGAGTAAGAAGACAACTATTCGGCTTGTGGATATGGAGGCTTCGTATCTTACTGTGGATTTCTTCCGGAAACTTCCTCAAGAAATGGAGAGAGCTGGTAATCCAGCTCAACCTTCTAATCCAGCTCAGCCTACTAATCCAGCTCAACCTACTAATCCATCTAATCGTTCTGGCCCAAACCCAAATGACGATCGATATGGTGAGGGGCATTTTAGAAGGATTGGATCAAATGTGTCATCCTACATAGGTTTAGTGTCAGACACACTCAGGATCACTATTCCAAAGGCTGTGGTATATTGTCAGGTCAGAGAAGCAAAACTATCATTGCTAAGCTATTTCTTCACACAAATTGGGAAAAAAGAGTTGTTAGACGAAGATCCTACAGTGATGGAGAGAAGACAACAATGTTTTAAAAGGCTTGAACTATATAAAGCAGCTAGGGATGAGATTGATTCGGTTTCTTGGGTACGATGA 1899 0.4271 MTTMESLIGLVNRIQQACTKLGDYGGSDNNTFSSLWEALPSVAVVGGQSSGKSSVLESIVGRDFLPRGSGIVTRRPLVLQLHKIEDDEREYAEFLHRQGRKITDFAVVRQEIQDETDRVTGKTKQISPIPIHLSIYSPKVVNLTLIDLPGLTKVAVDGQPESTVEDIETMVRSYVEKPNCIILAISPANQDIATSDAIKLAREVDPTGERTFGVLTKLDLMDKGTNALDVLEGRSYRLQHPWVGIVNRSQADINKNVDMIIARRKEVEYFETSPDYGHLASKMGSVYLAKLLSQHLESVIRARIPSITSLVNKSIEELESEMDHLGRPIAVDAGAQLYTILELCRKFERIFKEHLDGGRPGGDRIYNVFDNQLPAALRKLPIDKHLSLQNVKRVVSEADGYQPHLIAPEQGYRRLIEGALSYFRGPAEASVDAVHFVLKELVRKSIGETEELRRFPTLQAELSAATNEALERFREASKKTTIRLVDMEASYLTVDFFRKLPQEMERAGNPAQPSNPAQPTNPAQPTNPSNRSGPNPNDDRYGEGHFRRIGSNVSSYIGLVSDTLRITIPKAVVYCQVREAKLSLLSYFFTQIGKKELLDEDPTVMERRQQCFKRLELYKAARDEIDSVSWVR 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03438 632 Pfam Dynamin central region 226 494 IPR000375 -
Vivi7g03438 632 SMART GED_2 541 628 IPR003130 GO:0003924|GO:0005525
Vivi7g03438 632 FunFam dynamin-related protein 1E 4 314 - -
Vivi7g03438 632 PANTHER DYNAMIN 5 628 IPR022812 -
Vivi7g03438 632 MobiDBLite consensus disorder prediction 505 544 - -
Vivi7g03438 632 Gene3D - 4 314 IPR027417 -
Vivi7g03438 632 PRINTS Dynamin signature 206 222 IPR022812 -
Vivi7g03438 632 PRINTS Dynamin signature 64 81 IPR022812 -
Vivi7g03438 632 PRINTS Dynamin signature 229 248 IPR022812 -
Vivi7g03438 632 PRINTS Dynamin signature 187 205 IPR022812 -
Vivi7g03438 632 PRINTS Dynamin signature 137 154 IPR022812 -
Vivi7g03438 632 PRINTS Dynamin signature 39 57 IPR022812 -
Vivi7g03438 632 Pfam Dynamin GTPase effector domain 543 628 IPR003130 GO:0003924|GO:0005525
Vivi7g03438 632 Pfam Dynamin family 42 217 IPR045063 -
Vivi7g03438 632 ProSiteProfiles GED domain profile. 546 632 IPR020850 -
Vivi7g03438 632 Gene3D Dynamin, middle domain 330 600 - -
Vivi7g03438 632 SMART dynamin_3 4 256 IPR001401 GO:0003924|GO:0005525
Vivi7g03438 632 CDD DLP_1 39 305 IPR001401 GO:0003924|GO:0005525
Vivi7g03438 632 ProSitePatterns Dynamin-type guanine nucleotide-binding (G) domain signature. 65 74 IPR019762 -
Vivi7g03438 632 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 29 313 IPR027417 -
Vivi7g03438 632 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 36 305 IPR030381 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03438 Vivi-Chr7 100037022 100043542 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03438 - - gmx:100790977 1057.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g03438 7 100037022 100043542 Vivi7g03438 7 100037022 100043542 ECH