Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03419 ATGGCATCATCAGATGAAGAGGGTGAAATTCTGCCAGATTCTGTTGACGATTATTGGTTTGAAAATGATAAGGCAGAATTCGTTTCACTTTTTAGTTTGACATTATTGTGGAGCGTTGACGAGGTCAATTGTGACTCGGAAACAAAAGTGTTTTTACACGGTACTTCAGATAATGGCATCCAGAAAATTCACAAGCAGATTACAGGATGGAGATTTGAACTGTCATGCGAGCAGCCTGAGATTTCAGTTCTTTTGAGGGAGAAATACTGGATAGCTCTTCTAAAACCAAAAAAATGCTTTGAAAATACTATTAGGTCAGTCTTGGTCACAGTTTCTTGGTTGCATTTTGTGAAATGGAATCCAGAGGAATCAAGAATGTTTATTTGGGACAAAGTTTTGAAGGAATTTAGCTCATTTGATATTGCACCTTCTGAGGATGATGTTCTAAGTCATATGACATTGATTACAGAGGCTGCTAATAGAGACACAGAATTAACGAAATCCAAGTATTTGCTTAATTTTATAGGAAAGACATGTTCAAATGAAGACGTCGATGAGCAGGATGATCACACGACAAAGAAATTAAAGTTTATAGTTGAATCAGAAGAGGAGGAGGAGGAGGAGGATGACAAATCTGAAGGTGAAGGCGAACTCAATGTAAATGGAGAGCAAAGTATCGGATACGATACTGTTTGTGCAATTTGTGATAATGGTGGTGAAATACTTCCTTGTGAAGGAAGGTGTCTGAGATCCTTCCATGCAACTATAGAGGATGGTAGAGATACATTATGCGAATCTCTTGGCTACACTAGTACTCAAGTTAACGCCTTTCCAAACTTCTATTGTGAAAATTGTAGATATAAGAAGCATCAATGCTTTGCATGTGGCAGACTGGGTTCATCTGATGAATCATCTAATCCAGAGGTATTTCCTTGTGTTACTGCAAATTGTGGTCACTATTACCATCCTGATTGTGTTGCAAGACTACTCAACCCTGGAATTGACGCTAAACAAGAGGGAATGAGACAGAAAATTGCCATCGAAAAAACATTTGTCTGTCCTCTTCATATATGTTCTCTATGTAGAAAAGGTGAAAATAGGAATGTTCATGATTTGCAATTTGCGATGTGCAGACGCTGCCCCAAGGCTTACCACAGGAAATGCCTACCCAAGGAAATTTCCTTCGTATTTGATTATTATATGGGCTTTGAGCAAAGGGCTTGGGACAATCTCCTTGACAAACGAATTTTGATGTATTGCTTGAATCATGAGATAGTTCCGGAACTAGGAACTCCGGCTAGAAACCATCTGATATTTCCAGATAAGGATATCGAAAGGAAGAAAATCAGTTTCAAATTATTAAACAAAGAGAAGGTTGCTATAACATCAAAGAAAAGTTTTGAAGAACTTCTTCTCAATAAGTCATTGGCGCAAAAACTAACTTTAACGGAAAGGTCTGTCCTTCAAGGTGGAAATTCTTCCAACGCTATGGAGAAAATATACTCTAAGCCAGATACACATTTGTCATTTGAACAGCCGAAAAAATATTTGAAGGTTGAAACAATGTCTGCGTCAAATAGGTGCTTACCGAATTTTGATGGCAAAGTGCCTTTGAAAAGTGATAACTTCACTTGTAGTCCAAGGCTGCATGAACCTACATCACAACAGCAAAGATCTGTTGGTAGAATTGAAGAAACAAGCTTGAAGAAGCCTCTGGTTAAAAAAGTCAAAACTTCACTTGAAGCTAGAAAAGCAGATATGGAAAACCGAATTTTGGCTTTAATGGAAGAAGCCACCTCTAAATTGAACATGGAAAAATTTAAAAAGGAACAGCAAGTCTCCGATTCAAGTTCAAGTTCATCAGAAACTGTATTTCATAAGAACGTTACTCAAGGAAAAGTTGAAGGTTCTATTAAGGCTATTCAAATAGCTTTACAGAAGTTAGATGAAGGATGTAGTATTGAGGAAGCAAAAGCTATTTGTGAGCCAGAAATTGTTCGTCAGCTTTTTATTTGGCAGAAGCAGCTCAAGGTCTACCTTGCACCTTTTCTTCATGGAATGCGATATACTTCATATGGTCGCCATTTCACTAAAATAGACAAGTTGAAGCAGATTGTTGATAGGCTTCATTGGTATGTGCAAAATGGTGACACGGTTTTGGACTTCTGTTGTGGTGCGAATGATTTCAGCTGTCTAATGAAATCAAAGCTTGATCAGACTGGGAAGTCATGTTCATTTAAGAACTATGATTTATTTCAAGCTAAGAATGATTTCAACTTCGAAAAAAGAGATTGGATGACTGTCCAGCCTGAGGAATTGCCAGATGGTTCTCAGCTTATCATAGGGCTAAATCCTCCTTTTGGGGTCAAGGGTTTTCTTGCTAACAAATTTATTAACAAGGCATTAACGTTTAAGCCGAAACTCCTTATACTTATTGTGCCGAAAATAACAAAAAGACTTGACAGAAAGAAAGGTGGATACGATTTAATTTGGGAGGATGAGGAAATATGTTCAGGAAAGTCATTTTATCTACCGGGTTCTGTCGATACTCAAAACAAGCAATTGGAAGACTGGAATCTGAAGCCGCCTCCTCTTTACCTTTGGAGTCGCCCTGACTGGACTCGTAGACACATTGAAATTGCTCAAATTCATTGCCACATCAAACATGATGCGTATAATAATAAAGTACAAGAAATGACAAATTATCTCATGGAGGAGAATCTTGATTGTTATATGAATTACCCTGGGTTGCATGCACCTGGTAATTTCTTAAGCATATTTGACGGTGTTCCAGATGATAATGGCATTCCACTAGAGGATGCTCCAACTTGCTTTCCTTGA 2841 0.3794 MASSDEEGEILPDSVDDYWFENDKAEFVSLFSLTLLWSVDEVNCDSETKVFLHGTSDNGIQKIHKQITGWRFELSCEQPEISVLLREKYWIALLKPKKCFENTIRSVLVTVSWLHFVKWNPEESRMFIWDKVLKEFSSFDIAPSEDDVLSHMTLITEAANRDTELTKSKYLLNFIGKTCSNEDVDEQDDHTTKKLKFIVESEEEEEEEDDKSEGEGELNVNGEQSIGYDTVCAICDNGGEILPCEGRCLRSFHATIEDGRDTLCESLGYTSTQVNAFPNFYCENCRYKKHQCFACGRLGSSDESSNPEVFPCVTANCGHYYHPDCVARLLNPGIDAKQEGMRQKIAIEKTFVCPLHICSLCRKGENRNVHDLQFAMCRRCPKAYHRKCLPKEISFVFDYYMGFEQRAWDNLLDKRILMYCLNHEIVPELGTPARNHLIFPDKDIERKKISFKLLNKEKVAITSKKSFEELLLNKSLAQKLTLTERSVLQGGNSSNAMEKIYSKPDTHLSFEQPKKYLKVETMSASNRCLPNFDGKVPLKSDNFTCSPRLHEPTSQQQRSVGRIEETSLKKPLVKKVKTSLEARKADMENRILALMEEATSKLNMEKFKKEQQVSDSSSSSSETVFHKNVTQGKVEGSIKAIQIALQKLDEGCSIEEAKAICEPEIVRQLFIWQKQLKVYLAPFLHGMRYTSYGRHFTKIDKLKQIVDRLHWYVQNGDTVLDFCCGANDFSCLMKSKLDQTGKSCSFKNYDLFQAKNDFNFEKRDWMTVQPEELPDGSQLIIGLNPPFGVKGFLANKFINKALTFKPKLLILIVPKITKRLDRKKGGYDLIWEDEEICSGKSFYLPGSVDTQNKQLEDWNLKPPPLYLWSRPDWTRRHIEIAQIHCHIKHDAYNNKVQEMTNYLMEENLDCYMNYPGLHAPGNFLSIFDGVPDDNGIPLEDAPTCFP 946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03419 946 CDD PHD2_NSD 291 356 - -
Vivi7g03419 946 SMART PHD_3 291 357 IPR001965 -
Vivi7g03419 946 SMART PHD_3 358 424 IPR001965 -
Vivi7g03419 946 SMART PHD_3 231 286 IPR001965 -
Vivi7g03419 946 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 669 795 IPR029063 -
Vivi7g03419 946 MobiDBLite consensus disorder prediction 200 221 - -
Vivi7g03419 946 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 289 392 IPR013083 -
Vivi7g03419 946 PANTHER PHD FINGER-CONTAINING PROTEIN DDB_G0268158 5 896 - -
Vivi7g03419 946 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 228 288 IPR013083 -
Vivi7g03419 946 Coils Coil 577 597 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03419 Vivi-Chr7 99810560 99817676 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03419 - - cam:101512524 1491.86