LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi7g03355	ATGGCTGCAACAAGGACTCGAGTAAGTAGCTTTTCTCGTAACGTGTCGACTGGAACGTCTCAGAATTCAGGACTTAAGCATGGCCCTAATGGGACAACATTTATATCGTCTGGGATTCCAGATCTCGACAAGATTTTAGGTGGTGGCTTTTCTCTTGGTAGCCTTGTCATGATTATGGAAGATGCTGAAGCACCTCATCACATGCTTCTATTGAGAAATTTTATGTCTCAGGGACTGTTACACAAACAACCACTCTTGTATGCTAGTAGTGCTTCTAGAGACCCTAAAGGGTTTCTTGGTACTTTGCCTGCTCCAGCCTCAGCCAAAGAGGAAAAAACTCGAGATCTTACTAATGAAAAGGATCTGAGAATTGCTTGGCAATACAAGAAGTACTTTGGCGATCCTCAGTTAAATATCAACTCTAATAATGGTGCTCAACATGATTACTGCAATGATTTTGACTTGCGGAAGCCTCTCGAGCGACATTTTTATAGTGGCAAGAATGCAGATTGTGTCAGCATCCAAGATTCTACAAACCTCACTTCTCTTCAAGATCAATGTGCTGGATTTCTATCTCAATTCTCAAGAAATGAAGCCAATATTTCCTCTGCTGGCCGTATTGCAATTCAATCATTCTGTTCTCCACAATGCAAGTATGCAAACATGGAGTGGCATATGCTATCGTTTATTAGGTCCCTAAAAGCCATGACGCGATCTTCAAATGCTGCTGTTGTTGTAACATTTCCACCTTCACTTCTTTCTCCATCTTGTTCAAAAAGATTGCAACATATGGCAGACACCTTACTTTCTGTCAGAGCAATTCCAGATGAGGATAAAGATATGGCAAGACTCCTCACTGGTTACCAAGACATGGTTGGACTTCTTAATGTACATAAAGTCGCACGGTTAAATACACAGGTTCCTGTGATTCTCGAGGCAACAACATTCTCGATAAAATTGCAAAAAAGGAGGTATTTGATTCTAGAGTGTTTAAATCAAGCCCCTGTTGATGGTTCAAGTGGGAGTTCGTATAACACATCTGGTAGTTGTTCTGGGTCAACTAAAGCAGGGTCACTTGATTTTTAG	1086	0.4107	MAATRTRVSSFSRNVSTGTSQNSGLKHGPNGTTFISSGIPDLDKILGGGFSLGSLVMIMEDAEAPHHMLLLRNFMSQGLLHKQPLLYASSASRDPKGFLGTLPAPASAKEEKTRDLTNEKDLRIAWQYKKYFGDPQLNINSNNGAQHDYCNDFDLRKPLERHFYSGKNADCVSIQDSTNLTSLQDQCAGFLSQFSRNEANISSAGRIAIQSFCSPQCKYANMEWHMLSFIRSLKAMTRSSNAAVVVTFPPSLLSPSCSKRLQHMADTLLSVRAIPDEDKDMARLLTGYQDMVGLLNVHKVARLNTQVPVILEATTFSIKLQKRRYLILECLNQAPVDGSSGSSYNTSGSCSGSTKAGSLDF	361

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi7g03355	361	MobiDBLite	consensus disorder prediction	1	31	-	-
	Vivi7g03355	361	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	33	281	IPR027417	-
	Vivi7g03355	361	MobiDBLite	consensus disorder prediction	338	361	-	-
	Vivi7g03355	361	CDD	Elp4	30	274	-	-
	Vivi7g03355	361	FunFam	Elongator complex protein 4	17	337	-	-
	Vivi7g03355	361	PANTHER	PAX6 NEIGHBOR PROTEIN PAXNEB	3	361	IPR008728	GO:0002098\|GO:0033588
	Vivi7g03355	361	Gene3D	-	18	338	IPR027417	-
	Vivi7g03355	361	Pfam	PAXNEB protein	20	361	IPR008728	GO:0002098\|GO:0033588

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vivi7g03355	Vivi-Chr7	99155169	99160401	Tandem

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi7g03355	K11375		-	gmx:100799237	618.616