Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03344 ATGGCTGTTAACTTCCTTTTGTTTGTGTTCTTTTTTGCTAGTCAGTTTATTGCTGGATTTAACACTGAGCTACCACCTTCTAACTATGAAAATACTATCACCATTCTCAGTATTGATGGTGGTGGTATTAGAGGAATTATTCCAGCAGTAATTCTTAACCACTTGGAAAAGGCTCTTCAGGTTAAGGATAAAGAAGCTTCACTTGCAAAATATTTTGATGTGATATCAGGGACTAGTACTGGAGGACTTGTAACTGCTTTGCTCACTACTCCTCACCCAAATGACCCTACTCGTCCTCTATTTACTACTGAACAAGTTATCAACTTCTACCATCAATATGGTCCTTCAATATTCAACCAAACTAGTGGTTGGGATGCTACATACCCTGGTACAAAGTATGATGGAAAGTTCTTACATAATTTAGCAAGTGAGTTATTGAAAGATACAAGACTCAGTGACACTTTAACCAATGTTGTTATCCCAACTTTTGATATCAAGAAATTTCATCCTGTTACATTCTCAAGTTTTAAGTTGAACGCAGTTTCAAGCTTAGATGCAAAACTGTCAGATATATGCATTGGAACATCAGCTGCACCAACTTATCTACCTCCATATCACTTTGAAAATGATGGTGCTGAATTCAACTTGGTTGATGGAGGTGTTGCTGCATGTAATCCGGCTATGGCTGCTGTGAGTGAAGTGATGAAACAGAAGGGAGCGAGGCGTACAAAAATCTTGTTGTTGTCTATAGGATGTGGAACTAAAGAGTTTACAGGTTTTGATGCTGATGTTGCAACTCATTTCTCAGCTGCGTTCTGGGCAACATCTGGTCTCGCTGTTGGTGCTTATGATACTGCTTCTAAAGATATGACTGAATATTACCTTGATAATGTCCTCCCAAACATCCACTCTTCTCGCAACTACCTCAGAATTCAGGAATATAAGTTGGATCCATCGATGGAAGCCATGGATAATGCTACAATAGCTAACATTGAAAATCTTGCAAAGGTAGGGGAAAGCCTTCTGAAGAAACCAGTGTTGAAAATGAATGTGGATACCTATGAGCCAGAGGAAAAAACAAACCAAGGTACAAATGCTAAGGCTCTTGAGAAGTTTGCAGAGACTTTATACAAAATTCAGCAGTCTCGTCAAAAGAAGAATATGATTGAAAAGTTTATGGGACGACCACTTCTTAAAAATATCCCAAACCCTTTTGCTACTGCAAGCTAG 1230 0.387 MAVNFLLFVFFFASQFIAGFNTELPPSNYENTITILSIDGGGIRGIIPAVILNHLEKALQVKDKEASLAKYFDVISGTSTGGLVTALLTTPHPNDPTRPLFTTEQVINFYHQYGPSIFNQTSGWDATYPGTKYDGKFLHNLASELLKDTRLSDTLTNVVIPTFDIKKFHPVTFSSFKLNAVSSLDAKLSDICIGTSAAPTYLPPYHFENDGAEFNLVDGGVAACNPAMAAVSEVMKQKGARRTKILLLSIGCGTKEFTGFDADVATHFSAAFWATSGLAVGAYDTASKDMTEYYLDNVLPNIHSSRNYLRIQEYKLDPSMEAMDNATIANIENLAKVGESLLKKPVLKMNVDTYEPEEKTNQGTNAKALEKFAETLYKIQQSRQKKNMIEKFMGRPLLKNIPNPFATAS 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03344 409 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 36 231 IPR002641 GO:0006629
Vivi7g03344 409 Gene3D Cytosolic phospholipase A2 catalytic domain 24 389 - -
Vivi7g03344 409 PANTHER XYLOSE ISOMERASE 21 385 - -
Vivi7g03344 409 SUPERFAMILY FabD/lysophospholipase-like 32 355 IPR016035 -
Vivi7g03344 409 FunFam Patatin 26 389 - -
Vivi7g03344 409 Pfam Patatin-like phospholipase 36 230 IPR002641 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03344 Vivi-Chr7 98987414 98989873 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03344 24 387 Miscellaneous Gene Families AT2G26560 44.388 4.73e-92 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03344 - - gmx:100802114 535.798