Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03343 ATGGCAAATTATATCCTTTTCCTTGTGTGTGTTTTTGCTAGTCAAGTGATTGGTGGATTGAATACAAAGCTACCACCTCCTTCCTATGGAAACACAATAACCATTCTAAGCATTGATGGTGGTGGCATTAAGGGGATCATTCCATCTGTTGTTCTTGCACGCTTGGAAAAAATTCTTCAGGTTGTGTCAAATGATGAAAAAGCAGCGGTTGCAGATTATTTTGATGTGATAGCAGGGACTAGCACTGGAGGACTCATTGCTGCTATGCTTGCTGCTCCTAACTCAAATGACCCTTCTCGTCCTGCATCCACTGCTGCAGAAATCTTAAAATTCTATTTGGATTTTGGTCCTTCTATATTCAACCAAACTTCTGCTATTGGTTGGAATCAAACTTCTCCTCGTCCCAAGTATGATGGGAAGTTCTTACATGATAAAGCACGTGAGATATTGCAAGAATCAAGATTGCATGATACATTGACCAATCTCGTAATTCCAGCTTTCGATATCTTGAAAGTCCACCCAGTTATTTTCTCAAACTTCAAGGTGGATGAAGTTCCAAGCCTCGATGCAAAATTATCAGATATATCCATTGGAACTTCAGCCGCACCAACTCTACTGCCACCCTATCACTTTGAAAATGATGGTGCTGAATTCAATTTGATCGATGGAGGTGTAGCTGCTGGAAATCCGGCATTGGTTGCATTGAGTGAAGTGGCACAACAATTGAATGCGAAGAATCCCGATTTCATTCGTGTGAATTCGAACGAGCCTCTCAAAATCGTGTTGTTGTCATTAGGATGTGGAAGATTGGTGCCACCAGGTGTTGAGGCTAGATATGCATATTTCTTATCAGCTGTTCAGTGGATACCCCTTGGAGTTTTAGGTCTTGCTACTGCTGCTGCAGACCTAAATGAATATCACCTCGCATCCGTGTTTCCTGACATCCCTTCTTCTGAGAATTACTACCTTCGAGTCGAGGAGTATAACTTGGATCCATCCATAGGTTTTGATGATACTAGCAAAGAAAGCTTGGAAAAACTTGTAAAGGCAGGAGAAGACTTGTTACTACAAACTGTTAAGACTTTGGATGTAACTTCTTTTGTACCACATGAAAAGCCAAGTGAGGGTACAAATGATGAGGCTCTTAAAAGTCAAGTGATTGGTGGATTGAATACAAAGCTACCACCTCCTTCCTATGGAAATACAATAACCATTCTAAGCATTGATGGTGGTGGCATTAAGGGGATCATTCCTTCTGTTGTTCTTGCACGCTTGGAAAAAATTCTTCAGGTTGTGTCGAATGACGAAAAAGCAGCGGTTGCAGATTATTTTGATGTGATTGCTGGGACTAGCACCGGAGGACTCATTGCTGCTATGCTTGCTGCTCCTAACTCAGATGACCCTTCTCGTCCTGCATCAACTGCTGCAGAAATCTTAAAATTCTATTTGGATTTTGGTCCTTCAATATTCAACCAAACTTCTGCTATTGGTTGGAATCAAACTTCTCCTCGTCCCAAGTATGGTGGGAAGTTCTTACATGATAAAGCACGTGAGATATTGCAAGAATCAAGATTGCATGATACATTGACCAATCTTGTAATTCCAGCTTTCGATATCTTGAAAGTCCACCCAGTTATTTTCTCAAACTTCAAGGTGGATGAAGTTCCAAGCCTCGATGCAAAATTATCAGATATATCCATTGGAACTTCAGCCGCACCAACTCTATTGCCACCCTATCACTTTGAAAATGATGGTGCTGAGTTCAATTTGATCGATGGAGGTGTAGCTGCTGGAAATCCGGCATTGGTTGCATTGAGTGAAGTGGCACAACAATTGAATGCGAAGAATCCTGATTTTGTTCGTGTTAATTCGAACCAGCCTCTCAAAATCGTGTTGTTGTCATTAGGATGTGGAAGATTGGTGCCACCAGGTGTTGAGGCTAGATATGCATATTTCTTATCAGCTGTTCAGTGGATACCCCTTGGAGTTTTAGGTCTTGCTACTGCTGCTGCAGACATAAATGAATATCACCTCGCATCCGTGTTCCCTGACATCCCTTCTTCTGAGAATTACTACCTTCGAGTCGAGGAGTATAACTTGGATCCATCCATAGGTTTTGATGATACTAGCAAAGAAAGTTTGGAAAAACTTGTAAAGGCAGGAGAGGACTTGTTGGTACAAACTGTTAAGACTTTGAATGTAACTTCTTTTGTACCACATGAAAAGCCAAGTGAGGGTACAAATGATGAGGCTCTTAAAAGGTTGGCTGAGTTTCTCTACATTGAGAAGGTGTTGCGTTTGAAAAAGAAATCGATGGAAAAACGAGGCCGGCCATTTGTTGAATAA 2346 0.4139 MANYILFLVCVFASQVIGGLNTKLPPPSYGNTITILSIDGGGIKGIIPSVVLARLEKILQVVSNDEKAAVADYFDVIAGTSTGGLIAAMLAAPNSNDPSRPASTAAEILKFYLDFGPSIFNQTSAIGWNQTSPRPKYDGKFLHDKAREILQESRLHDTLTNLVIPAFDILKVHPVIFSNFKVDEVPSLDAKLSDISIGTSAAPTLLPPYHFENDGAEFNLIDGGVAAGNPALVALSEVAQQLNAKNPDFIRVNSNEPLKIVLLSLGCGRLVPPGVEARYAYFLSAVQWIPLGVLGLATAAADLNEYHLASVFPDIPSSENYYLRVEEYNLDPSIGFDDTSKESLEKLVKAGEDLLLQTVKTLDVTSFVPHEKPSEGTNDEALKSQVIGGLNTKLPPPSYGNTITILSIDGGGIKGIIPSVVLARLEKILQVVSNDEKAAVADYFDVIAGTSTGGLIAAMLAAPNSDDPSRPASTAAEILKFYLDFGPSIFNQTSAIGWNQTSPRPKYGGKFLHDKAREILQESRLHDTLTNLVIPAFDILKVHPVIFSNFKVDEVPSLDAKLSDISIGTSAAPTLLPPYHFENDGAEFNLIDGGVAAGNPALVALSEVAQQLNAKNPDFVRVNSNQPLKIVLLSLGCGRLVPPGVEARYAYFLSAVQWIPLGVLGLATAAADINEYHLASVFPDIPSSENYYLRVEEYNLDPSIGFDDTSKESLEKLVKAGEDLLVQTVKTLNVTSFVPHEKPSEGTNDEALKRLAEFLYIEKVLRLKKKSMEKRGRPFVE 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03343 781 Pfam Patatin-like phospholipase 36 235 IPR002641 GO:0006629
Vivi7g03343 781 Pfam Patatin-like phospholipase 406 605 IPR002641 GO:0006629
Vivi7g03343 781 SUPERFAMILY FabD/lysophospholipase-like 32 359 IPR016035 -
Vivi7g03343 781 SUPERFAMILY FabD/lysophospholipase-like 402 731 IPR016035 -
Vivi7g03343 781 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 36 235 IPR002641 GO:0006629
Vivi7g03343 781 PANTHER XYLOSE ISOMERASE 393 767 - -
Vivi7g03343 781 FunFam Patatin 396 772 - -
Vivi7g03343 781 Gene3D Cytosolic phospholipase A2 catalytic domain 396 772 - -
Vivi7g03343 781 Gene3D Cytosolic phospholipase A2 catalytic domain 26 387 - -
Vivi7g03343 781 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 406 605 IPR002641 GO:0006629
Vivi7g03343 781 FunFam Patatin 26 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03343 Vivi-Chr7 98949266 98957987 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03343 394 766 Miscellaneous Gene Families AT2G26560 41.688 4.58e-80 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03343 - - vvo:131619810 1535.01