Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03342 ATGGCTAAATTTTTTCTGTTATTTGTGTTTGTTTTTGCTAGTCAAGTGATTGGTGGATTGAATACAAAGCTACCATCTCCTTCATATGGAAATACAATAAGTATTCTGAGTATTGATGCAGGTGGTATTAAGGGAATTCTTCCAACTGTTGTTCTTGAGCACTTGGAATATGCACTTCAGATTGTGTCAAGAGATGAAAAGGCAGCACTAGCAGACTATTTTGATGTGATAGCAGGAACAAGTATGGGAGGAATCATTACTGGAATGCTAACTACTCCTAACCCTAATGACAATTCACGTCCTTTGTTTACTACTAATCAAATCTTACGATTCTTCTTGGATTTTGGTCCTTCTATATTCAACCTAACTTCTGCTAATAATTGGGATCATGATACTAGAAATGCCAAGTTTGACGGCAAGTTCTTGTATGAAAAAATACGCGAGCTTTTGCAAGAAACACGTCTGCATGAAACATTGACCAATGTTGTAATTCCAACTTTTGATATCTTGGACTTACACCCAGTTATCTTCTCAAGCTTTAAGCTAAAGACTATTGCTAGCTTAGATGCAAAACTTTCTGATATATGTCTTGGGACTTCAGCTGCACCATATGAAGTACCACCCTATAGCTTTAAGAATGGTGATAAGGAATTCAATCTAGTTGATGGGATTCTCACTGCAGCTAGTCCGGCCTTGCTTGCCGTAAGTGAAGTGATACAACAACTGAATGAGAAGAATTCTGATTTTGTTTCTATAAAAGCAAACGAGCCTATTAAAATCGTGTTGCTGTCATTAGGAACGGGAACTGATGTAGAGAAAAAAGGGATTCCTGCTTCTTTGGCACAGTCCCTTACCTATAACGAATGGCTACCCGTATTAGCTGCTGATTATTCTGTATCTGCTGGAAAAGTGAATGACTATCATCTTGAATCAGTGTTTCCAAGTGATTCATCTTCTTCAGACAATTATTACCTTCGAATTGAGGAGTATAATTTGGATTCAGCCATAGCTCCTGATGATGCTTCTAAAGAAAAGGTGGAAAAGCTTTTAAAGACCGGAGATGATTTGCTCAAACAGTTTGTTAAGGTTATGAATGTAACTTCTTTTCTTCCATACGAGAAACCGAGTGAGGGTACAAATGCAGAAGCTCTTGAAAGGTTGGCTGAAATTCTGTACAATGAGAGGCAGCTGCGTTTGAAAAGAAAATCGATGGAAAAACAAGGACGACCATTCATTGAAGCTATTCCTTCTACTTTCCAGATGACTTAA 1269 0.3783 MAKFFLLFVFVFASQVIGGLNTKLPSPSYGNTISILSIDAGGIKGILPTVVLEHLEYALQIVSRDEKAALADYFDVIAGTSMGGIITGMLTTPNPNDNSRPLFTTNQILRFFLDFGPSIFNLTSANNWDHDTRNAKFDGKFLYEKIRELLQETRLHETLTNVVIPTFDILDLHPVIFSSFKLKTIASLDAKLSDICLGTSAAPYEVPPYSFKNGDKEFNLVDGILTAASPALLAVSEVIQQLNEKNSDFVSIKANEPIKIVLLSLGTGTDVEKKGIPASLAQSLTYNEWLPVLAADYSVSAGKVNDYHLESVFPSDSSSSDNYYLRIEEYNLDSAIAPDDASKEKVEKLLKTGDDLLKQFVKVMNVTSFLPYEKPSEGTNAEALERLAEILYNERQLRLKRKSMEKQGRPFIEAIPSTFQMT 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03342 422 Gene3D Cytosolic phospholipase A2 catalytic domain 23 404 - -
Vivi7g03342 422 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 36 235 IPR002641 GO:0006629
Vivi7g03342 422 PANTHER XYLOSE ISOMERASE 23 399 - -
Vivi7g03342 422 SUPERFAMILY FabD/lysophospholipase-like 33 364 IPR016035 -
Vivi7g03342 422 Pfam Patatin-like phospholipase 36 234 IPR002641 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03342 Vivi-Chr7 98894137 98896725 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03342 24 406 Miscellaneous Gene Families AT2G26560 42.000 2.01e-84 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03342 - - cam:101513147 520.776