Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03337 ATGGCGACAATTAACCCTTTTGATTTGTTGGGTGACGATGCTGAAGATCCTTCACAGTTGATTGCTGCTGAACAACTCAAAGCCGCGGCTGCAGCCGCCGCCGCTCCCAAAAAGGGTTCCGAACAAGGCAAACAAGCTGCTCCCAAAAAGGCTGCTGTTTTGCCTTCCAAACCACTTCCTCCTTCTCAGGCTGTGAGAGAGGCAAGAAATGAACCATCTCGTGGTGGCCGTGGAGGCGGGCGAGGATTTGGAGGAGGATATGGACGTGGTCGTGGTGGTGGCGGCTTTGGACGTGACTTTTCCAATGACGATAACTCCAACTCCTCTTCACTGCCTGCTCCTCCGGCTAATCAAGGTTCTTTTGAAGGAGATACTGGGAATCCATCTGAAAGGCGTGGTTATGGTGCTCCTCGTGCTCCCTACCGTGCTGGTGGAGGCGGTGGTCGTCGTGGAGGATTTAGCAACGGCGAGGCTGGTGAAGAAGGACGTCCACGAAGGACATTTGATCGCCACAGTGGGACTGGACGAGGTGGCGGATTCAAACGTGAAGGTGCTGGACGTGGAAATTGGGGAACTCAGTCGGATGAAATTGCTCAGGTGACTGACGAAGTTGCTAATGAAACTGAAAAGAATGTGACTGAGGAGAAGCCTGCTGGCGAAGAAGACGCAGCCGCTGAAGGAAACAAAGAAACACCCGCTAATGAAGCGGAAGAAAAGGAGCCTGAGGACAAGGAAATGACTCTAGAAGAATATGAGAAAGTGTTGGAAGAGAAAAGGAAAGCCCTGCAGGCACTTAAGGTTGAGAGCAGAAAGGTGGACACTAAAGAGTTTGAATCCATGAAGCCTCTTTCATGCAAGAAAGAAAATGACGAGATCTTTGCTAAACTGGGATCTGACAAGGACAAACGCAAAGACGCCTTTGAGAAGGAGAAGGCAAAGAAGGCTCTGAGCATCAATGAGTTTCTGAAACCTGCTGAAGGAGAGAAGTATTACAACCCAGGTGGGCGCGGTGGTCGCGGACGTGGTGGACGCGGTGGTTCAAGGGGAGGAGGAGGAGGTTATGGTGGAAATGCCTACGGCAATGTGCCAGCCCCATCTATTGAGGATCCTGGTCAATTCCCAACTTTAGGTGGTGGCAAGTGA 1143 0.5144 MATINPFDLLGDDAEDPSQLIAAEQLKAAAAAAAAPKKGSEQGKQAAPKKAAVLPSKPLPPSQAVREARNEPSRGGRGGGRGFGGGYGRGRGGGGFGRDFSNDDNSNSSSLPAPPANQGSFEGDTGNPSERRGYGAPRAPYRAGGGGGRRGGFSNGEAGEEGRPRRTFDRHSGTGRGGGFKREGAGRGNWGTQSDEIAQVTDEVANETEKNVTEEKPAGEEDAAAEGNKETPANEAEEKEPEDKEMTLEEYEKVLEEKRKALQALKVESRKVDTKEFESMKPLSCKKENDEIFAKLGSDKDKRKDAFEKEKAKKALSINEFLKPAEGEKYYNPGGRGGRGRGGRGGSRGGGGGYGGNAYGNVPAPSIEDPGQFPTLGGGK 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03337 380 Coils Coil 248 268 - -
Vivi7g03337 380 MobiDBLite consensus disorder prediction 207 246 - -
Vivi7g03337 380 MobiDBLite consensus disorder prediction 326 380 - -
Vivi7g03337 380 MobiDBLite consensus disorder prediction 192 206 - -
Vivi7g03337 380 Pfam Stm1 1 79 IPR019084 -
Vivi7g03337 380 MobiDBLite consensus disorder prediction 159 177 - -
Vivi7g03337 380 MobiDBLite consensus disorder prediction 31 246 - -
Vivi7g03337 380 Pfam Hyaluronan / mRNA binding family 164 272 IPR006861 -
Vivi7g03337 380 MobiDBLite consensus disorder prediction 100 125 - -
Vivi7g03337 380 PANTHER HYALURONIC ACID-BINDING PROTEIN 4 1 378 IPR039764 GO:0003723
Vivi7g03337 380 Gene3D - 162 276 - -
Vivi7g03337 380 SMART HABP4_PAI_RBP1_2 164 273 IPR006861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03337 Vivi-Chr7 98845984 98849193 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03337 K13199 - gmx:100791259 369.777
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g03337 7 98845984 98849193 Vivi7g03337 7 98845984 98849193 ECH