Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03334 ATGATAGGTATTGATGTTACTGCCCATGATATACGATTTGTTGAGGACAACTGGGAGAGCCCGGTTCTTGGTGCCTGGGGTTTGGGATGGGAAATCTGGATGGATGGAATGGAGATTACTCAGTTCACCTACTTTCAGCAGGCTGGAAGTCTCCCGTTATCACCAGTATCAGTAGAAATAACTTATGGCCTGGAGCGTATCCTTATGTTACTGCAGGGAGTTGATCACTTCAAAAAGATCAAATATTCTGATGGAATTACTTATGGGGAGCTATTCTTGGAGAATGAAAAGGAAATGAGTGCATATTATTTGGAGCATGCCAGCGTTGATCATCTTCAAAAACATTTTGATTTTTTTGAGGAGGAATCTCGTCGTTTACTTTCTTCAGGCCTTGCAATCCCTGCGTATGATCAGCTTCTGAAAACGTCTCATACGTTTAATATTTTAGACTCCAGAGGCTTTGTTGGAGTAACAGAGCGTGCTCGTTATTTTGGTCGCATGCGTAGTTTAGCTCGCCAGTGTGCCCAACTTTGGTTGAAGACCAGGGAGACGCTTGGCTACCCCCTTGGTTTCATCTCCGAACCTGATCATTCTGTAACGCCAAAGGATCTTTTGGAGGCCGCATGTGAAAAGGTGCATGATCACGCAAGAGTATTTGTTCTTGAAATTGGAACTGAAGAAATGCCACCTCATGATGTTGTTGATGCAAGCAAGCAACTGAAAGATTTACTGGTCCAATTACTGGATCGACAGAGGTTAAAGCATGGTGAAGTGCAGGTTTTTGGCACTGCACGGAGACTAGTGGTTTCTGTTGAAAATCTTTTCACGAAACAAACAGAGCAGGAAGTTGAGGTTCGAGGTCCTCCTGTTTCAAAAGCATTTGACCAGGAAGGAAATCCAACAAAGGCTGCTGAGGGTTTTTCCCGTAAATATGCTGTTCCACTGGACTTGGTATACAGAAAGGTTGATGGGAAAACCGAATATGTATATGCTCGAATAAAAGAGTCTTCAAGACATGCTGTGGAGGTTTTATCTGAAGATTTGCCTGCTACTATTGCAAAAATTTCATTTCCAAAGACAATGCGTTGGAATTCACAGGTGATGTTTAGCAGGCCTATCCGTTGGATTTTGGCCTTGCATGGAAATGTTGTGGTCCCATTTATGTTTGCTGGGGTAATGAGTGGAAACTTGTCGTGTGGTCTTCGTAATACTGCATCAGCTGTTGTCCAGATAGAAAATGCAGAATCATATTCAGTTGCAATGGAAAATGTGGGGGTCAATGTTGTAGTTGAGGACCGTAAGAAAAAAATTGTAGAGCAATCTAATACATTAGCAGAGAGCGTAAATGGCCAAATTCTGATTCCGAAAGGTTTGCTTGACGAGGTTGTAAATCTTGTGGAGGCACCTGTTCCAGTGCTTGGAAAGTTTAAAGAAACCTTCTTAGATCTTCCAAAGGATCTTTTGACTATGGTTATGCAAAAACACCAGAAATATTTTGCTGTATGCGATACTAATGGACAACTGCTGCCTTACTTTATTGCTGTTGCAAATGGAGCAATTGATGAGACTACAGTGAGGAAAGGAAATGAAGCAGTGCTCAGGGCTCGCTATGAAGATGCTAAATTTTTTTATGAGATGGACACTCGTAAAAGGTTTTCAGAATTCCGAGAACAACTGAAAAATATTCTCTTTCATGAGAAACTTGGAACCATGCTAGATAAAATGACTCGTGTTGAAAACACGGTTACTAAGCTAAGTTGCATTATGGATATCAATGAAGATCTGCAACAAATTATCCGGGAAGCTGCCTCACTTGCCATGTCTGACCTTGCCACATCAGTTGTCACTGAGTTTACCGCACTTTCAGGAGTAATGGGGCGTCACTATGCCCTTCGAGATGGATACTCAGAGCAGACTGCAGAGGCCTTGTTTGAGATCACACTTCCTAGATTTTCTGGGGACACACTTCCTAATAGCGATGCTGGCATAGTTTTGGCAATTGCTGATAGATTAGATAGCCTGGTAGGTTTATTCACTGCTGGCTGTCAACCTAGTTCCACAAACGATCCATTTGGCCTGCGAAGAATCTCATATGGTCTTGTGCAATTGTTGGTAGAAAAGAATAAAAACCTAGATTTTAAAGAGGCTCTGGAACTTGCCGCAGATGTCCAGCCAATTAAAGTAAATCCTCAAGTAATAGACGACGTACGTCAATTTGTCACTCGAAGATTAGAGCAATTTTTGGTGGACAAGGGAGTGAGTGCGGAAATTGTTCGTTCCGTCCTTGCAGAGAGGGCTAACTTTCCCTCTCTAGCAGCAAAATCAGCATACAAAATGGAAGAATTATCAAAAGGCGAGCTTTTTCCTAAAGTAGTTGAAGCATACTCTCGGCCAACTCGAATTGTTCGTGGAAAGGAAAATGAGCTTCAATCAGAGGTGGATGAGGCTGCCTTCGAGACAAATGAAGAAAGAGTATTGTGGAACACATTTTTGTCGGTTAAAAAGAGTATCAATCCAGGTCTTGACATCGATGATTTTGTTGAAATTTCATCCCAGCTTGTACAACCACTTGATGATTTCTTTAATAATGTCTTTGTAATGGTGGATGATGCCAAGATCAGAAAAAACAGACTAGCTCTGCTAAAAGGAATTGCTGAACTCCCTAAAGGAATTGCAGACCTTACATTGTTGCCAGGATTTTAA 2703 0.4177 MIGIDVTAHDIRFVEDNWESPVLGAWGLGWEIWMDGMEITQFTYFQQAGSLPLSPVSVEITYGLERILMLLQGVDHFKKIKYSDGITYGELFLENEKEMSAYYLEHASVDHLQKHFDFFEEESRRLLSSGLAIPAYDQLLKTSHTFNILDSRGFVGVTERARYFGRMRSLARQCAQLWLKTRETLGYPLGFISEPDHSVTPKDLLEAACEKVHDHARVFVLEIGTEEMPPHDVVDASKQLKDLLVQLLDRQRLKHGEVQVFGTARRLVVSVENLFTKQTEQEVEVRGPPVSKAFDQEGNPTKAAEGFSRKYAVPLDLVYRKVDGKTEYVYARIKESSRHAVEVLSEDLPATIAKISFPKTMRWNSQVMFSRPIRWILALHGNVVVPFMFAGVMSGNLSCGLRNTASAVVQIENAESYSVAMENVGVNVVVEDRKKKIVEQSNTLAESVNGQILIPKGLLDEVVNLVEAPVPVLGKFKETFLDLPKDLLTMVMQKHQKYFAVCDTNGQLLPYFIAVANGAIDETTVRKGNEAVLRARYEDAKFFYEMDTRKRFSEFREQLKNILFHEKLGTMLDKMTRVENTVTKLSCIMDINEDLQQIIREAASLAMSDLATSVVTEFTALSGVMGRHYALRDGYSEQTAEALFEITLPRFSGDTLPNSDAGIVLAIADRLDSLVGLFTAGCQPSSTNDPFGLRRISYGLVQLLVEKNKNLDFKEALELAADVQPIKVNPQVIDDVRQFVTRRLEQFLVDKGVSAEIVRSVLAERANFPSLAAKSAYKMEELSKGELFPKVVEAYSRPTRIVRGKENELQSEVDEAAFETNEERVLWNTFLSVKKSINPGLDIDDFVEISSQLVQPLDDFFNNVFVMVDDAKIRKNRLALLKGIAELPKGIADLTLLPGF 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03334 900 Gene3D Class II aaRS and biotin synthetases; domain 2 108 187 - -
Vivi7g03334 900 ProSiteProfiles Heterodimeric glycyl-transfer RNA synthetases family profile. 570 862 IPR006194 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Vivi7g03334 900 PANTHER GLYCYL-TRNA SYNTHETASE 2 898 IPR006194 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Vivi7g03334 900 Pfam Glycyl-tRNA synthetase beta subunit 219 763 IPR015944 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Vivi7g03334 900 SUPERFAMILY HD-domain/PDEase-like 546 680 - -
Vivi7g03334 900 ProSiteProfiles Heterodimeric glycyl-transfer RNA synthetases family profile. 1 179 IPR006194 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Vivi7g03334 900 Hamap Glycine--tRNA ligase beta subunit [glyS]. 216 897 IPR015944 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Vivi7g03334 900 Pfam Glycyl-tRNA synthetase alpha subunit 2 183 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Vivi7g03334 900 Gene3D Bira Bifunctional Protein; Domain 2 1 107 IPR045864 -
Vivi7g03334 900 NCBIfam glycine--tRNA ligase subunit beta 219 896 IPR015944 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Vivi7g03334 900 FunFam Glycine--tRNA ligase, chloroplastic/mitochondrial 2 108 187 - -
Vivi7g03334 900 SUPERFAMILY Class II aaRS and biotin synthetases 2 183 IPR045864 -
Vivi7g03334 900 PRINTS Glycyl-tRNA synthetase alpha subunit signature 59 74 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Vivi7g03334 900 PRINTS Glycyl-tRNA synthetase alpha subunit signature 10 34 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Vivi7g03334 900 PRINTS Glycyl-tRNA synthetase alpha subunit signature 144 160 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Vivi7g03334 900 PRINTS Glycyl-tRNA synthetase alpha subunit signature 36 56 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03334 Vivi-Chr7 98825583 98840600 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03334 K14164 - gmx:100787365 1558.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g03334 7 98825583 98840600 Vivi7g03334 7 98825583 98840600 ECH