Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03332 ATGTATGTGGAACCTAGCGTCCGCCCTGATGATAGTCGATATGGAGAAAACCCAAATAGGCTCCAAAAACACACTCAATTTCAGGTAATATTGAAGCCTGATCCTGGAAATTCACAGGACCTTTTTATCCGCAGCCTTTCAGCTTTAGGTATTGATGTTACTGCCCATGATATACGATTTGTTGAGGACAACTGGGAGAGCCCGGTTCTTGGTGCCTGGGGTTTGGGATGGGAAATCTGGATGGATGGAATGGAGATTACTCAGTTCACCTACTTTCAGCAGGCTGGAAGTCTCCCGTTATCACCAGTATCAGTAGAAATAACTTATGGCCTGGAGCGTATCCTTATGTTACTGCAGGGAGTTGATCACTTCAAAAAGATCAAATATTCTGATGGAATTACTTATGGGGAGCTATTCTTGGAGAATGAAAAGGAAATGAGTGCATATTATTTGGAGCATGCCAGCGTTGATCATCTTCAAAAACATTTTGATTTTTTTGAGGAGGAATCTCGTCGTTTACTTTCTTCAGGCCTTGCAATCCCTGCGTATGATCAGCTTCTGAAAACGTCTCATACGTTTAATATTTTAGACTCCAGAGGCTTTGTTGGAGTAACAGAGCGTGCTCGTTATTTTGGTCGCATGCGTAGTTTAGCTCGCCAGTGTGCCCAACTTTGGTTGAAGACCAGGGAGACGCTTGGCTACCCCCTTGGTTTCATCTCCGAACCTGATCATTCTGTAACGCCAAAGGATCTTTTGGAGGCCGCATGTGAAAAGGTGCATGATCACGCAAGAGTATTTGTTCTTGAAATTGGAACTGAAGAAATGCCACCTCATGATGTTGTTGATGCAAGCAAGCAACTGAAAGATTTACTGGTCCAATTACTGGATCGACAGAGGTTAAAGCATGGTGAAGTGCAGGTTTTTGGCACTGCACGGAGACTAGTGGTTTCTGTTGAAAATCTTTTCACGAAACAAACAGAGCAGGAAGTTGAGGTTCGAGGTCCTCCTGTTTCAAAAGCATTTGACCAGGAAGGAAATCCAACAAAGGCTGCTGAGGGTTTTTCCCGTAAATATGCTGTTCCACTGGACTTGGTATACAGAAAGGTTGATGGGAAAACCGAATATGTATATGCTCGAATAAAAGAGTCTTCAAGACATGCTGTGGAGGTTTTATCTGAAGATTTGCCTGCTACTATTGCAAAAATTTCATTTCCAAAGACAATGCGTTGGAATTCACAGGTGATGTTTAGCAGGCCTATCCGTTGGATTTTGGCCTTGCATGGAAATGTTGTGGTCCCATTTATGTTTGCTGGGGTAATGAGTGGAAACTTGTCGTGTGGTCTTCGTAATACTGCATCAGCTGTTGTCCAGATAGAAAATGCAGAATCATATTCAGTTGCAATGGAAAATGTGGGGGTCAATGTTGTAGTTGAGGACCGTAAGAAAAAAATTGTAGAGCAATCTAATACATTAGCAGAGAGCGTAAATGGCCAAATTCTGATTCCGAAAGGTTTGCTTGACGAGGTTGTAAATCTTGTGGAGGCACCTGTTCCAGTGCTTGGAAAGTTTAAAGAAACCTTCTTAGATCTTCCAAAGGATCTTTTGACTATGGTTATGCAAAAACACCAGAAATATTTTGCTGTATGCGATACTAATGGACAACTGCTGCCTTACTTTATTGCTGTTGCAAATGGAGCAATTGATGAGACTACAGTGAGGAAAGGAAATGAAGCAGTGCTCAGGGCTCGCTATGAAGATGCTAAATTTTTTTATGAGATGGACACTCGTAAAAGGTTTTCAGAATTCCGAGAACAACTGAAAAATATTCTCTTTCATGAGAAACTTGGAACCATGCTAGATAAAATGACTCGTGTTGAAAACACGGTTACTAAGCTAAGTTGCATTATGGATATCAATGAAGATCTGCAACAAATTATCCGGGAAGCTGCCTCACTTGCCATGTCTGACCTTGCCACATCAGTTGTCACTGAGTTTACCGCACTTTCAGGAGTAATGGGGCGTCACTATGCCCTTCGAGATGGATACTCAGAGCAGACTGCAGAGGCCTTGTTTGAGATCACACTTCCTAGATTTTCTGGGGACACACTTCCTAATAGCGATGCTGGCATAGTTTTGGCAATTGCTGATAGATTAGATAGCCTGGTAGGTTTATTCACTGCTGGCTGTCAACCTAGTTCCACAAACGATCCATTTGGCCTGCGAAGAATCTCATATGGTCTTGTGCAATTGTTGGTAGAAAAGAATAAAAACCTAGATTTTAAAGAGGCTCTGGAACTTGCCGCAGATGTCCAGCCAATTAAAGTAAATCCTCAAGTAATAGACGACGTACGTCAATTTGTCACTCGAAGATTAGAGCAATTTTTGGTGGACAAGGGAGTGAGTGCGGAAATTGTTCGTTCCGTCCTTGCAGAGAGGGCTAACTTTCCCTCTCTAGCAGCAAAATCAGCATACAAAATGGAAGAATTATCAAAAGGCGAGCTTTTTCCTAAAGTAGTTGAAGCATACTCTCGGCCAACTCGAATTGTTCGTGGAAAGGAAAATGAGCTTCAATCAGAGGTGGATGAGGCTGCCTTCGAGACAAATGAAGAAAGAGTATTGTGGAACACATTTTTGTCGGTTAAAAAGAGTATCAATCCAGGTCTTGACATCGATGATTTTGTTGAAATTTCATCCCAGCTTGTACAACCACTTGATGATTTCTTTAATAATGTCTTTGTAATGGTGGATGATGCCAAGATCAGAAAAAACAGACTAGCTCTGCTAAAAGGAATTGCTGAACTCCCTAAAGGAATTGCAGACCTTACATTGTTGCCAGGATTTTAA 2844 0.4188 MYVEPSVRPDDSRYGENPNRLQKHTQFQVILKPDPGNSQDLFIRSLSALGIDVTAHDIRFVEDNWESPVLGAWGLGWEIWMDGMEITQFTYFQQAGSLPLSPVSVEITYGLERILMLLQGVDHFKKIKYSDGITYGELFLENEKEMSAYYLEHASVDHLQKHFDFFEEESRRLLSSGLAIPAYDQLLKTSHTFNILDSRGFVGVTERARYFGRMRSLARQCAQLWLKTRETLGYPLGFISEPDHSVTPKDLLEAACEKVHDHARVFVLEIGTEEMPPHDVVDASKQLKDLLVQLLDRQRLKHGEVQVFGTARRLVVSVENLFTKQTEQEVEVRGPPVSKAFDQEGNPTKAAEGFSRKYAVPLDLVYRKVDGKTEYVYARIKESSRHAVEVLSEDLPATIAKISFPKTMRWNSQVMFSRPIRWILALHGNVVVPFMFAGVMSGNLSCGLRNTASAVVQIENAESYSVAMENVGVNVVVEDRKKKIVEQSNTLAESVNGQILIPKGLLDEVVNLVEAPVPVLGKFKETFLDLPKDLLTMVMQKHQKYFAVCDTNGQLLPYFIAVANGAIDETTVRKGNEAVLRARYEDAKFFYEMDTRKRFSEFREQLKNILFHEKLGTMLDKMTRVENTVTKLSCIMDINEDLQQIIREAASLAMSDLATSVVTEFTALSGVMGRHYALRDGYSEQTAEALFEITLPRFSGDTLPNSDAGIVLAIADRLDSLVGLFTAGCQPSSTNDPFGLRRISYGLVQLLVEKNKNLDFKEALELAADVQPIKVNPQVIDDVRQFVTRRLEQFLVDKGVSAEIVRSVLAERANFPSLAAKSAYKMEELSKGELFPKVVEAYSRPTRIVRGKENELQSEVDEAAFETNEERVLWNTFLSVKKSINPGLDIDDFVEISSQLVQPLDDFFNNVFVMVDDAKIRKNRLALLKGIAELPKGIADLTLLPGF 947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03332 947 NCBIfam glycine--tRNA ligase subunit beta 266 943 IPR015944 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Vivi7g03332 947 Pfam Glycyl-tRNA synthetase alpha subunit 2 230 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Vivi7g03332 947 PRINTS Glycyl-tRNA synthetase alpha subunit signature 83 103 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Vivi7g03332 947 PRINTS Glycyl-tRNA synthetase alpha subunit signature 191 207 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Vivi7g03332 947 PRINTS Glycyl-tRNA synthetase alpha subunit signature 106 121 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Vivi7g03332 947 PRINTS Glycyl-tRNA synthetase alpha subunit signature 26 46 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Vivi7g03332 947 PRINTS Glycyl-tRNA synthetase alpha subunit signature 5 20 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Vivi7g03332 947 PRINTS Glycyl-tRNA synthetase alpha subunit signature 57 81 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Vivi7g03332 947 SUPERFAMILY HD-domain/PDEase-like 593 727 - -
Vivi7g03332 947 FunFam Glycine--tRNA ligase, chloroplastic/mitochondrial 2 155 234 - -
Vivi7g03332 947 ProSiteProfiles Heterodimeric glycyl-transfer RNA synthetases family profile. 617 909 IPR006194 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Vivi7g03332 947 ProSiteProfiles Heterodimeric glycyl-transfer RNA synthetases family profile. 1 226 IPR006194 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Vivi7g03332 947 Gene3D Bira Bifunctional Protein; Domain 2 1 154 IPR045864 -
Vivi7g03332 947 PANTHER GLYCYL-TRNA SYNTHETASE 2 945 IPR006194 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Vivi7g03332 947 Hamap Glycine--tRNA ligase beta subunit [glyS]. 263 944 IPR015944 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Vivi7g03332 947 SUPERFAMILY Class II aaRS and biotin synthetases 2 230 IPR045864 -
Vivi7g03332 947 Gene3D Class II aaRS and biotin synthetases; domain 2 155 234 - -
Vivi7g03332 947 Pfam Glycyl-tRNA synthetase beta subunit 266 810 IPR015944 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03332 Vivi-Chr7 98824088 98840600 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03332 K14164 - gmx:100787365 1653.65