Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03330 ATGAACGGCGAAGAAGAAGAAATAGCTGAAGAAGTTGAAGCCATGAAATCCGTCTACGAAAACGATTGCACCATTCTCCATTCCATTCCTCCTCACTTCCATCTCTCCCTCAAACCCAGAACCGCCAATGTTTCCTCTCATCAGTTTGTAGAAATTGTTCTTGAGGTGCATGCAACTCCACAGTATCCAAAAGAAGCACCTTCTGTTGCTCTTGTGGATTGCAAGGGTTTAGATCAACATAGACAAAAGCATTTATTGGATCATATAGAAAGTAAAGCCAAGGAGCTCTCCCCTGGATTAATGCTTGTAGCTCTTTGTGAGGAAGCTGTAGAGAAACTATCAGAGATGAACCATCCTGATGGTGATTGTCCATTGTGTTTATTCCCTTTGGTCACAGAAGATCACCAAAGTGAAACCTTGCCTTTTATGAAGTTAATGTCTTGCTTTCACTGTTTTCACAGTGAATGTATTATTAGATGGTGGAATTGGCTTGAGAGTTCTAAACAAACAGGGTCTTCCAATTCAGATAATGCAACAGCTCATCGTAACCGGGATAAGCATGAAAAATTGGAAGAGGGTGCTGGAAACTGCCCTGTCTGTCGCAAACCTTTTCATGCCAAAGATTTGGACCATGTGCTTGACCTAGTTGGCTCACATTCTTCCAAAGAGAGTTTGAATAATGAAGTCGATAATGAGGAAAACATCCTTCAATCTGAGGACGAGATCATCAGAAAACAGAGGTTTGAAGCCATCTTAAGTTTACAGAAGGAGAACAATGGTTTGATTGAACCCAAAAAAGATATAGTAATATTGCCTGGTATGTATCTTCAACAACCGGTTGCAGTGCCCGACTCCACATCAACCAAGGAACCTGATGAGACTGAGCAACATGAAAGAGATCCACCTGCAGTTTCGTCTGGAAAACATGTTAGTGGGACCTCAAATGGACCGAGTTCTAGTGGGAACAGGAATTTTGGTGGAAGGAGGCATAGACCAAGAGGTGATCATCATCACTCTAGTTCGACCGCAAGACCAAGAGATGACCATCATCACTCTAGTTTGACTGCAAGACCTAGAGGTGATCATCATCACTCTAGGTTTATTGCAAGACCAAGAGGTGATCATCATCACTCTAGTTCGACTGCAAGACCAAGAGATGATCATAATCACTCTAGTTCGACTGCAAGACCAAGAGATGATCATAATCACTCTAGTTCAACTGCAAGACCAAGAGATGATCATCATCACTCTAGTTCGACTGCAAGAAAACCAGTCCAACAATGGGTGGTTCGAAGAGATACTCCTAGCAATAAGCAATAG 1320 0.4227 MNGEEEEIAEEVEAMKSVYENDCTILHSIPPHFHLSLKPRTANVSSHQFVEIVLEVHATPQYPKEAPSVALVDCKGLDQHRQKHLLDHIESKAKELSPGLMLVALCEEAVEKLSEMNHPDGDCPLCLFPLVTEDHQSETLPFMKLMSCFHCFHSECIIRWWNWLESSKQTGSSNSDNATAHRNRDKHEKLEEGAGNCPVCRKPFHAKDLDHVLDLVGSHSSKESLNNEVDNEENILQSEDEIIRKQRFEAILSLQKENNGLIEPKKDIVILPGMYLQQPVAVPDSTSTKEPDETEQHERDPPAVSSGKHVSGTSNGPSSSGNRNFGGRRHRPRGDHHHSSSTARPRDDHHHSSLTARPRGDHHHSRFIARPRGDHHHSSSTARPRDDHNHSSSTARPRDDHNHSSSTARPRDDHHHSSSTARKPVQQWVVRRDTPSNKQ 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03330 439 MobiDBLite consensus disorder prediction 170 191 - -
Vivi7g03330 439 Coils Coil 222 242 - -
Vivi7g03330 439 Gene3D Ubiquitin Conjugating Enzyme 1 118 IPR016135 -
Vivi7g03330 439 SMART RWD2001b 10 116 IPR006575 GO:0005515
Vivi7g03330 439 MobiDBLite consensus disorder prediction 282 439 - -
Vivi7g03330 439 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 119 216 IPR013083 -
Vivi7g03330 439 SUPERFAMILY UBC-like 5 113 IPR016135 -
Vivi7g03330 439 ProSiteProfiles Zinc finger RING-type profile. 123 201 IPR001841 -
Vivi7g03330 439 SMART ring_2 123 200 IPR001841 -
Vivi7g03330 439 MobiDBLite consensus disorder prediction 372 420 - -
Vivi7g03330 439 FunFam RWD domain-containing protein 119 216 - -
Vivi7g03330 439 MobiDBLite consensus disorder prediction 307 325 - -
Vivi7g03330 439 MobiDBLite consensus disorder prediction 288 304 - -
Vivi7g03330 439 Pfam RWD domain 6 112 IPR006575 GO:0005515
Vivi7g03330 439 ProSiteProfiles RWD domain profile. 10 116 IPR006575 GO:0005515
Vivi7g03330 439 MobiDBLite consensus disorder prediction 338 362 - -
Vivi7g03330 439 FunFam eIF-2-alpha kinase GCN2 1 122 - -
Vivi7g03330 439 PANTHER RING FINGER PROTEIN 25 4 435 IPR039133 GO:0061630
Vivi7g03330 439 MobiDBLite consensus disorder prediction 421 439 - -
Vivi7g03330 439 SUPERFAMILY RING/U-box 114 207 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03330 K10640 - gmx:100791789 458.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g03330 7 98814261 98819485 Vivi7g03330 7 98814261 98819485 ECH