Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03315 ATGAATGAAGAGTCTAACTCTTATGGAAATGCTTCGGATTTATTGCATCAGCTGGAGGATATTCTTGAATCTGATGCACTAATTGATGAGCTGGGGTTTATTCATCCTTCCCAGTTTTCCTTGTTAAAAGAAGAATCTGGAATTTCGACAAATTTATCAGGCGACAGGATAGCAAGCTCTGACGAACTATGCTTCTGGAACCGAGATCATAAATTGGGAATTTCAACTCATATTCTTCTACCGTTATATAAAGCTGCTAAACATGCATTCATGACGACGTTTAAACAATATAAGATGTGTGGAAACCAATCTGACAAAGTTGGACTTTCTTTACGTGCTTCAACATCCGATGACCATCTTGAAAGCATACTTTTGAGACACAGCAAGTCTCTTCTGCTGCTAAGCTGTGATTTCATGACTGCTTGGAATTGCAGAAAGTTATTAGTGTCTAAGAAGAACCAGGTCTCAATGTTTGTAGATGAACTTCTACTATCAGAACTTGTGCTCTCATACTCAGCCAAAAGTGAACAAGCTTGGAATCATAGGCGATGGGTGATCAAGTCAATCTCTGCAAACTGTTCAAACTTCAAAGAGATTTTGGCAAAAGAATCTGAGCTGGTTGAGAAAATAGCTGAGAGATCAAAGATGAATTATCGTGCATGGAATCACCGGTGCTGGTTAATCTCATACATGACTAAAGATCAGGTGCTATCTGAGATGAGGAAATCCAGAAGTTGGGCTGCACTGCATGTTTCTGATAATTGTTGCTTTCATTATCGCAGACGGCTACTGCAAAAGATGATGGAGGACCAAAGTTGTGTGGAAGAAGCTGCATCTTATGGTCATAATGCTGATATTGTCCAAGCAATGAAGGACGAACTTGAATGGAATGAAACATTGATAAAGCGTTATGTCGGAAGAGAGGCTCTATGGCTTCATCGTCGCTTTCTTTCCTCATACTGGATAAATAGTTTCCTACCTGACTCTAATGACAGATCCTACCATTCCAAGGAGGCAACAAACATGTATCATGACTTTGGCACCTTTCTGCAGAAGGAATTAAGTCTCTTTCACTCCTCAACTTTTGTTGATGATGATTATGGGGATTTCCAAGCCCAAGCCACACATTCTGCTAGTTACATTCTGTGGTTAAAAGTGCAATTGCCCAAGCCTCTTGAAAATGAGCTCCTTGAGAAGATAAAAGATGTAGATTTGAAGACCTTACTGGATAAGTCATGCCCAGAGAGATCCTCTCTATTCAATTGCTTTATGAGCTAG 1278 0.3991 MNEESNSYGNASDLLHQLEDILESDALIDELGFIHPSQFSLLKEESGISTNLSGDRIASSDELCFWNRDHKLGISTHILLPLYKAAKHAFMTTFKQYKMCGNQSDKVGLSLRASTSDDHLESILLRHSKSLLLLSCDFMTAWNCRKLLVSKKNQVSMFVDELLLSELVLSYSAKSEQAWNHRRWVIKSISANCSNFKEILAKESELVEKIAERSKMNYRAWNHRCWLISYMTKDQVLSEMRKSRSWAALHVSDNCCFHYRRRLLQKMMEDQSCVEEAASYGHNADIVQAMKDELEWNETLIKRYVGREALWLHRRFLSSYWINSFLPDSNDRSYHSKEATNMYHDFGTFLQKELSLFHSSTFVDDDYGDFQAQATHSASYILWLKVQLPKPLENELLEKIKDVDLKTLLDKSCPERSSLFNCFMS 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03315 425 Gene3D Protein prenylyltransferase 95 404 - -
Vivi7g03315 425 ProSiteProfiles Protein prenyltransferases alpha subunit repeat profile. 199 233 IPR002088 GO:0008318|GO:0018342
Vivi7g03315 425 PANTHER PROTEIN FARNESYLTRANSFERASE ALPHA SUBUNIT/RAB GERANYLGERANYL TRANSFERASE ALPHA SUBUNIT 29 420 - -
Vivi7g03315 425 FunFam Protein prenyltransferase alpha subunit repeat-containing protein 1-B isoform D 93 403 - -
Vivi7g03315 425 ProSiteProfiles Protein prenyltransferases alpha subunit repeat profile. 157 191 IPR002088 GO:0008318|GO:0018342
Vivi7g03315 425 Pfam Protein prenyltransferase alpha subunit repeat 202 231 IPR002088 GO:0008318|GO:0018342
Vivi7g03315 425 Pfam Protein prenyltransferase alpha subunit repeat 291 319 IPR002088 GO:0008318|GO:0018342
Vivi7g03315 425 Pfam Protein prenyltransferase alpha subunit repeat 160 187 IPR002088 GO:0008318|GO:0018342
Vivi7g03315 425 SUPERFAMILY Protein prenylyltransferase 121 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03315 Vivi-Chr7 98666613 98672284 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03315 K14137 - gmx:100807426 672.544